RNA–Protein interactions for RNA: ENST00000530939.5

CHID1-217, Transcript of chitinase domain containing 1, humanhuman

TSL 4

Gene CHID1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-217ENST00000530939 SYT17Q9BSW7 474 aa35.71■■■■□ 3.31
CHID1-217ENST00000530939 UBR3Q6ZT12 1888 aa35.7■■■■□ 3.31
CHID1-217ENST00000530939 SCN11AQ9UI33 1791 aa35.69■■■■□ 3.3
CHID1-217ENST00000530939 FLAD1Q8NFF5 587 aa35.69■■■■□ 3.3
CHID1-217ENST00000530939 KLHL34Q8N239 644 aa35.68■■■■□ 3.3
CHID1-217ENST00000530939 LINC00116Q8NCU8 138 aa35.68■■■■□ 3.3
CHID1-217ENST00000530939 COL3A1P02461 1466 aaPredicted RBP35.67■■■■□ 3.3
CHID1-217ENST00000530939 ITPK1Q13572 414 aa35.67■■■■□ 3.3
CHID1-217ENST00000530939 VIRMAQ69YN4 1812 aaKnown RBP35.67■■■■□ 3.3
CHID1-217ENST00000530939 PHF14O94880 888 aa35.66■■■■□ 3.3
CHID1-217ENST00000530939 MSL1Q68DK7 614 aa35.66■■■■□ 3.3
CHID1-217ENST00000530939 RBM42Q9BTD8 480 aaKnown RBP35.66■■■■□ 3.3
CHID1-217ENST00000530939 U2SURPO15042 1029 aaKnown RBP35.65■■■■□ 3.3
CHID1-217ENST00000530939 AKAP4Q5JQC9 854 aa35.64■■■■□ 3.3
CHID1-217ENST00000530939 SMIM5Q71RC9 77 aa35.62■■■■□ 3.29
CHID1-217ENST00000530939 AMIGO3Q86WK7 504 aa35.62■■■■□ 3.29
CHID1-217ENST00000530939 NFATC2IPQ8NCF5 419 aa35.62■■■■□ 3.29
CHID1-217ENST00000530939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.6■■■■□ 3.29
CHID1-217ENST00000530939 MAP3K5Q99683 1374 aa35.6■■■■□ 3.29
CHID1-217ENST00000530939 ZNF831Q5JPB2 1677 aa35.59■■■■□ 3.29
CHID1-217ENST00000530939 GNPATO15228 680 aa35.59■■■■□ 3.29
CHID1-217ENST00000530939 CFAP53Q96M91 514 aa35.59■■■■□ 3.29
CHID1-217ENST00000530939 MTHFSDQ2M296 383 aaKnown RBP35.58■■■■□ 3.29
CHID1-217ENST00000530939 SLC4A9Q96Q91 983 aa35.58■■■■□ 3.29
CHID1-217ENST00000530939 SSFA2P28290 1259 aa35.57■■■■□ 3.28
CHID1-217ENST00000530939 COL5A3P25940 1745 aaPredicted RBP35.56■■■■□ 3.28
CHID1-217ENST00000530939 PTCD1O75127 700 aaKnown RBP35.55■■■■□ 3.28
CHID1-217ENST00000530939 LGR6Q9HBX8 967 aa35.55■■■■□ 3.28
CHID1-217ENST00000530939 PPP2R1AP30153 589 aa35.54■■■■□ 3.28
CHID1-217ENST00000530939 RNMTO43148 476 aaKnown RBP35.52■■■■□ 3.28
CHID1-217ENST00000530939 SLC52A2Q9HAB3 445 aa35.52■■■■□ 3.28
CHID1-217ENST00000530939 YY1P25490 414 aa35.5■■■■□ 3.27
CHID1-217ENST00000530939 RTCBQ9Y3I0 505 aaKnown RBP35.49■■■■□ 3.27
CHID1-217ENST00000530939 MRC1P22897 1456 aa35.48■■■■□ 3.27
CHID1-217ENST00000530939 NUDCQ9Y266 331 aa35.48■■■■□ 3.27
CHID1-217ENST00000530939 ADAMTS7Q9UKP4 1686 aa35.47■■■■□ 3.27
CHID1-217ENST00000530939 NLGN2Q8NFZ4 835 aa35.47■■■■□ 3.27
CHID1-217ENST00000530939 MYH14Q7Z406 1995 aaKnown RBP35.47■■■■□ 3.27
CHID1-217ENST00000530939 CNTNAP4Q9C0A0 1308 aa35.46■■■■□ 3.27
CHID1-217ENST00000530939 TJP1Q07157 1748 aa35.46■■■■□ 3.27
CHID1-217ENST00000530939 TRAPPC3LQ5T215 181 aa35.45■■■■□ 3.27
CHID1-217ENST00000530939 RC3H1Q5TC82 1133 aaKnown RBP35.45■■■■□ 3.27
CHID1-217ENST00000530939 GAS2L2Q8NHY3 880 aa35.45■■■■□ 3.27
CHID1-217ENST00000530939 PELP1Q8IZL8 1130 aaKnown RBP35.44■■■■□ 3.26
CHID1-217ENST00000530939 GPR162Q16538 588 aa35.43■■■■□ 3.26
CHID1-217ENST00000530939 PRKAR2BP31323 418 aa35.42■■■■□ 3.26
CHID1-217ENST00000530939 SLC39A6Q13433 755 aa35.42■■■■□ 3.26
CHID1-217ENST00000530939 U2AF1L5P0DN76 240 aaPredicted RBP35.41■■■■□ 3.26
CHID1-217ENST00000530939 U2AF1Q01081 240 aaKnown RBP eCLIP35.41■■■■□ 3.26
CHID1-217ENST00000530939 RSPH6AQ9H0K4 717 aa35.41■■■■□ 3.26
CHID1-217ENST00000530939 CICQ96RK0 1608 aaPredicted RBP35.4■■■■□ 3.26
CHID1-217ENST00000530939 GNAT3A8MTJ3 354 aa35.4■■■■□ 3.26
CHID1-217ENST00000530939 RPS6KA4O75676 772 aa35.4■■■■□ 3.26
CHID1-217ENST00000530939 CRKLP46109 303 aaKnown RBP35.39■■■■□ 3.26
CHID1-217ENST00000530939 CHD4Q14839 1912 aa35.39■■■■□ 3.26
CHID1-217ENST00000530939 ADRA2BP18089 450 aa35.38■■■■□ 3.25
CHID1-217ENST00000530939 ARHGEF1Q92888 912 aaKnown RBP35.38■■■■□ 3.25
CHID1-217ENST00000530939 C4AP0C0L4 1744 aa35.37■■■■□ 3.25
CHID1-217ENST00000530939 PHACTR3Q96KR7 559 aa35.37■■■■□ 3.25
CHID1-217ENST00000530939 UTRNP46939 3433 aa35.37■■■■□ 3.25
CHID1-217ENST00000530939 RFC4P35249 363 aa35.36■■■■□ 3.25
CHID1-217ENST00000530939 CD2APQ9Y5K6 639 aa35.36■■■■□ 3.25
CHID1-217ENST00000530939 TEFQ10587 303 aa35.35■■■■□ 3.25
CHID1-217ENST00000530939 DNAJC10Q8IXB1 793 aa35.35■■■■□ 3.25
CHID1-217ENST00000530939 KCPQ6ZWJ8 1503 aa35.35■■■■□ 3.25
CHID1-217ENST00000530939 IL17REQ8NFR9 667 aa35.34■■■■□ 3.25
CHID1-217ENST00000530939 UBR2Q8IWV8 1755 aa35.33■■■■□ 3.25
CHID1-217ENST00000530939 MMP10P09238 476 aa35.32■■■■□ 3.24
CHID1-217ENST00000530939 SIPA1L3O60292 1781 aaPredicted RBP35.32■■■■□ 3.24
CHID1-217ENST00000530939 TTC5Q8N0Z6 440 aa35.31■■■■□ 3.24
CHID1-217ENST00000530939 NLGN1Q8N2Q7 840 aa35.3■■■■□ 3.24
CHID1-217ENST00000530939 FCHSD2O94868 740 aa35.29■■■■□ 3.24
CHID1-217ENST00000530939 INTS5Q6P9B9 1019 aaKnown RBP35.29■■■■□ 3.24
CHID1-217ENST00000530939 CCDC87Q9NVE4 849 aa35.28■■■■□ 3.24
CHID1-217ENST00000530939 GYS1P13807 737 aa35.27■■■■□ 3.24
CHID1-217ENST00000530939 GOLGB1Q14789 3259 aaKnown RBP35.26■■■■□ 3.24
CHID1-217ENST00000530939 DDX10Q13206 875 aaKnown RBP35.26■■■■□ 3.24
CHID1-217ENST00000530939 CYP19A1P11511 503 aaPredicted RBP35.25■■■■□ 3.23
CHID1-217ENST00000530939 YBX3P16989 372 aaKnown RBP eCLIP35.24■■■■□ 3.232e-6■■□□□ 13.1
CHID1-217ENST00000530939 VSIG10Q8N0Z9 540 aa35.24■■■■□ 3.23
CHID1-217ENST00000530939 SRP68Q9UHB9 627 aaKnown RBP35.24■■■■□ 3.23
CHID1-217ENST00000530939 RTF1Q92541 710 aaKnown RBP35.23■■■■□ 3.23
CHID1-217ENST00000530939 CEMIPQ8WUJ3 1361 aa35.23■■■■□ 3.23
CHID1-217ENST00000530939 ZNF790Q6PG37 636 aa35.22■■■■□ 3.23
CHID1-217ENST00000530939 USP42Q9H9J4 1324 aaKnown RBP35.21■■■■□ 3.23
CHID1-217ENST00000530939 SOS1Q07889 1333 aaPredicted RBP35.2■■■■□ 3.23
CHID1-217ENST00000530939 GRIN3BO60391 1043 aa35.19■■■■□ 3.22
CHID1-217ENST00000530939 ZNF496Q96IT1 587 aaPredicted RBP35.19■■■■□ 3.22
CHID1-217ENST00000530939 WWC3Q9ULE0 1092 aa35.19■■■■□ 3.22
CHID1-217ENST00000530939 ZBTB1Q9Y2K1 713 aa35.19■■■■□ 3.22
CHID1-217ENST00000530939 PARP3Q9Y6F1 533 aa35.19■■■■□ 3.22
CHID1-217ENST00000530939 KIF13BQ9NQT8 1826 aa35.18■■■■□ 3.22
CHID1-217ENST00000530939 BTBD11A6QL63 1104 aa35.18■■■■□ 3.22
CHID1-217ENST00000530939 NEFMP07197 916 aa35.18■■■■□ 3.22
CHID1-217ENST00000530939 MCM10Q7L590 875 aa35.18■■■■□ 3.22
CHID1-217ENST00000530939 RALBP1Q15311 655 aa35.17■■■■□ 3.22
CHID1-217ENST00000530939 HEG1Q9ULI3 1381 aa35.16■■■■□ 3.22
CHID1-217ENST00000530939 ZPR1O75312 459 aa35.16■■■■□ 3.22
CHID1-217ENST00000530939 STARD3NLO95772 234 aa35.16■■■■□ 3.22
CHID1-217ENST00000530939 FKBP8Q14318 412 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms