RNA–Protein interactions for RNA: ENST00000530788.1

MSANTD4-204, Transcript of Myb/SANT DNA binding domain containing 4 with coiled-coils, humanhuman

TSL 1 (best)

Gene MSANTD4, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD4-204ENST00000530788 DCAF5Q96JK2 942 aa20.45■□□□□ 0.86
MSANTD4-204ENST00000530788 CCDC87Q9NVE4 849 aa20.45■□□□□ 0.86
MSANTD4-204ENST00000530788 CGNL1Q0VF96 1302 aa20.45■□□□□ 0.86
MSANTD4-204ENST00000530788 CD163L1Q9NR16 1453 aa20.44■□□□□ 0.86
MSANTD4-204ENST00000530788 MAP2P11137 1827 aaKnown RBP20.44■□□□□ 0.86
MSANTD4-204ENST00000530788 HOXC9P31274 260 aa20.44■□□□□ 0.86
MSANTD4-204ENST00000530788 VEGFAP15692 232 aaPredicted RBP20.43■□□□□ 0.86
MSANTD4-204ENST00000530788 PIM2Q9P1W9 311 aa20.43■□□□□ 0.86
MSANTD4-204ENST00000530788 MKRN1Q9UHC7 482 aaKnown RBP20.43■□□□□ 0.86
MSANTD4-204ENST00000530788 C4AP0C0L4 1744 aa20.42■□□□□ 0.86
MSANTD4-204ENST00000530788 NLGN1Q8N2Q7 840 aa20.42■□□□□ 0.86
MSANTD4-204ENST00000530788 USHBP1Q8N6Y0 703 aa20.42■□□□□ 0.86
MSANTD4-204ENST00000530788 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
MSANTD4-204ENST00000530788 PCDH11XQ9BZA7 1347 aa20.42■□□□□ 0.86
MSANTD4-204ENST00000530788 PCDH11YQ9BZA8 1340 aa20.42■□□□□ 0.86
MSANTD4-204ENST00000530788 LOC102724428A0A0B4J2F2 783 aa20.41■□□□□ 0.86
MSANTD4-204ENST00000530788 SIK1P57059 783 aa20.41■□□□□ 0.86
MSANTD4-204ENST00000530788 TMF1P82094 1093 aa20.41■□□□□ 0.86
MSANTD4-204ENST00000530788 DALRD3Q5D0E6 543 aaKnown RBP20.41■□□□□ 0.86
MSANTD4-204ENST00000530788 NBPF6Q5VWK0 638 aa20.41■□□□□ 0.86
MSANTD4-204ENST00000530788 NBPF4Q96M43 638 aa20.41■□□□□ 0.86
MSANTD4-204ENST00000530788 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
MSANTD4-204ENST00000530788 TATP17735 454 aaPredicted RBP20.4■□□□□ 0.86
MSANTD4-204ENST00000530788 AMPHP49418 695 aa20.4■□□□□ 0.86
MSANTD4-204ENST00000530788 EDC4Q6P2E9 1401 aaKnown RBP20.4■□□□□ 0.86
MSANTD4-204ENST00000530788 PIGBQ92521 554 aa20.4■□□□□ 0.86
MSANTD4-204ENST00000530788 CTCFP49711 727 aaPredicted RBP20.39■□□□□ 0.85
MSANTD4-204ENST00000530788 ITPK1Q13572 414 aa20.39■□□□□ 0.85
MSANTD4-204ENST00000530788 HDGFL2Q7Z4V5 671 aaPredicted RBP20.39■□□□□ 0.85
MSANTD4-204ENST00000530788 ABHD8Q96I13 439 aa20.39■□□□□ 0.85
MSANTD4-204ENST00000530788 ZC3H4Q9UPT8 1303 aaKnown RBP20.38■□□□□ 0.85
MSANTD4-204ENST00000530788 MLLT1Q03111 559 aaPredicted RBP20.38■□□□□ 0.85
MSANTD4-204ENST00000530788 TMC1Q8TDI8 760 aa20.37■□□□□ 0.85
MSANTD4-204ENST00000530788 CREBZFQ9NS37 354 aa20.37■□□□□ 0.85
MSANTD4-204ENST00000530788 PARP3Q9Y6F1 533 aa20.37■□□□□ 0.85
MSANTD4-204ENST00000530788 GLTPD2A6NH11 291 aa20.36■□□□□ 0.85
MSANTD4-204ENST00000530788 CYP27B1O15528 508 aa20.36■□□□□ 0.85
MSANTD4-204ENST00000530788 FBLN1P23142 703 aa20.36■□□□□ 0.85
MSANTD4-204ENST00000530788 TRAPPC3LQ5T215 181 aa20.36■□□□□ 0.85
MSANTD4-204ENST00000530788 AIDAQ96BJ3 306 aa20.36■□□□□ 0.85
MSANTD4-204ENST00000530788 ATP6V1AP38606 617 aa20.35■□□□□ 0.85
MSANTD4-204ENST00000530788 EIF4G2P78344 907 aaKnown RBP eCLIP20.34■□□□□ 0.85
MSANTD4-204ENST00000530788 RASSF7Q02833 373 aa20.34■□□□□ 0.85
MSANTD4-204ENST00000530788 GYS1P13807 737 aa20.33■□□□□ 0.85
MSANTD4-204ENST00000530788 LBX1P52954 281 aa20.33■□□□□ 0.85
MSANTD4-204ENST00000530788 SLC12A5Q9H2X9 1139 aa20.33■□□□□ 0.85
MSANTD4-204ENST00000530788 RTCBQ9Y3I0 505 aaKnown RBP20.33■□□□□ 0.85
MSANTD4-204ENST00000530788 KDM6AO15550 1401 aaPredicted RBP20.33■□□□□ 0.84
MSANTD4-204ENST00000530788 CNTNAP1P78357 1384 aa20.32■□□□□ 0.84
MSANTD4-204ENST00000530788 CHRNA5P30532 468 aa20.31■□□□□ 0.84
MSANTD4-204ENST00000530788 ARHGEF1Q92888 912 aaKnown RBP20.31■□□□□ 0.84
MSANTD4-204ENST00000530788 A0A1W2PP64 1363 aa20.31■□□□□ 0.84
MSANTD4-204ENST00000530788 POTECB2RU33 542 aa20.3■□□□□ 0.84
MSANTD4-204ENST00000530788 COG3Q96JB2 828 aa20.3■□□□□ 0.84
MSANTD4-204ENST00000530788 TERF2IPQ9NYB0 399 aa20.3■□□□□ 0.84
MSANTD4-204ENST00000530788 ASAP1Q9ULH1 1129 aa20.3■□□□□ 0.84
MSANTD4-204ENST00000530788 SMG6Q86US8 1419 aaKnown RBP20.29■□□□□ 0.84
MSANTD4-204ENST00000530788 LMNB1P20700 586 aa20.29■□□□□ 0.84
MSANTD4-204ENST00000530788 RGS19P49795 217 aa20.29■□□□□ 0.84
MSANTD4-204ENST00000530788 TIAM2Q8IVF5 1701 aa20.29■□□□□ 0.84
MSANTD4-204ENST00000530788 RTL1A6NKG5 1358 aa20.29■□□□□ 0.84
MSANTD4-204ENST00000530788 HSPA5P11021 654 aaKnown RBP20.28■□□□□ 0.84
MSANTD4-204ENST00000530788 RFC4P35249 363 aa20.28■□□□□ 0.84
MSANTD4-204ENST00000530788 TMOD3Q9NYL9 352 aa20.28■□□□□ 0.84
MSANTD4-204ENST00000530788 CCDC85CA6NKD9 419 aa20.27■□□□□ 0.84
MSANTD4-204ENST00000530788 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
MSANTD4-204ENST00000530788 CHADLQ6NUI6 762 aa20.26■□□□□ 0.83
MSANTD4-204ENST00000530788 WBP1LQ9NX94 342 aa20.26■□□□□ 0.83
MSANTD4-204ENST00000530788 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
MSANTD4-204ENST00000530788 ROCK2O75116 1388 aaKnown RBP20.25■□□□□ 0.83
MSANTD4-204ENST00000530788 VEGFBP49765 207 aa20.25■□□□□ 0.83
MSANTD4-204ENST00000530788 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
MSANTD4-204ENST00000530788 HSPA8P11142 646 aaKnown RBP20.24■□□□□ 0.83
MSANTD4-204ENST00000530788 VIRMAQ69YN4 1812 aaKnown RBP20.24■□□□□ 0.83
MSANTD4-204ENST00000530788 ATG3Q9NT62 314 aa20.23■□□□□ 0.83
MSANTD4-204ENST00000530788 DDR1Q08345 913 aa20.22■□□□□ 0.83
MSANTD4-204ENST00000530788 RC3H1Q5TC82 1133 aaKnown RBP20.22■□□□□ 0.83
MSANTD4-204ENST00000530788 KDRP35968 1356 aa20.21■□□□□ 0.83
MSANTD4-204ENST00000530788 RPS6KA4O75676 772 aa20.21■□□□□ 0.83
MSANTD4-204ENST00000530788 POTEIP0CG38 1075 aa20.21■□□□□ 0.83
MSANTD4-204ENST00000530788 POTEJP0CG39 1038 aa20.21■□□□□ 0.83
MSANTD4-204ENST00000530788 DPY19L2Q6NUT2 758 aa20.21■□□□□ 0.83
MSANTD4-204ENST00000530788 COL5A3P25940 1745 aaPredicted RBP20.2■□□□□ 0.82
MSANTD4-204ENST00000530788 HSP90AB2PQ58FF8 381 aa20.2■□□□□ 0.82
MSANTD4-204ENST00000530788 SLC4A9Q96Q91 983 aa20.2■□□□□ 0.82
MSANTD4-204ENST00000530788 FKBP8Q14318 412 aa20.19■□□□□ 0.82
MSANTD4-204ENST00000530788 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
MSANTD4-204ENST00000530788 MIER1Q8N108 512 aa20.18■□□□□ 0.82
MSANTD4-204ENST00000530788 CARD11Q9BXL7 1154 aa20.18■□□□□ 0.82
MSANTD4-204ENST00000530788 SRP68Q9UHB9 627 aaKnown RBP20.18■□□□□ 0.82
MSANTD4-204ENST00000530788 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
MSANTD4-204ENST00000530788 PASKQ96RG2 1323 aa20.18■□□□□ 0.82
MSANTD4-204ENST00000530788 INSRP06213 1382 aa20.18■□□□□ 0.82
MSANTD4-204ENST00000530788 TNRC18O15417 2968 aaPredicted RBP20.18■□□□□ 0.82
MSANTD4-204ENST00000530788 ZNF831Q5JPB2 1677 aa20.17■□□□□ 0.82
MSANTD4-204ENST00000530788 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
MSANTD4-204ENST00000530788 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
MSANTD4-204ENST00000530788 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
MSANTD4-204ENST00000530788 TMEM88BA6NKF7 163 aa20.15■□□□□ 0.82
MSANTD4-204ENST00000530788 NFKBIEO00221 500 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms