RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 C4orf17Q53FE4 359 aa7.17□□□□□ -1.26
CTR9-205ENST00000529898 ZNF295-AS1Q8N0V1 137 aa7.17□□□□□ -1.26
CTR9-205ENST00000529898 FNBP4Q8N3X1 1017 aaPredicted RBP7.17□□□□□ -1.26
CTR9-205ENST00000529898 ADAMTS19Q8TE59 1207 aa7.17□□□□□ -1.26
CTR9-205ENST00000529898 TMEM229AB2RXF0 380 aa7.16□□□□□ -1.26
CTR9-205ENST00000529898 ARHGEF15O94989 841 aa7.16□□□□□ -1.26
CTR9-205ENST00000529898 STAU1O95793 577 aaKnown RBP7.16□□□□□ -1.26
CTR9-205ENST00000529898 THBS1P07996 1170 aa7.16□□□□□ -1.26
CTR9-205ENST00000529898 GDF10P55107 478 aa7.16□□□□□ -1.26
CTR9-205ENST00000529898 MTFR1Q15390 333 aa7.16□□□□□ -1.26
CTR9-205ENST00000529898 GNASQ5JWF2 1037 aa7.16□□□□□ -1.26
CTR9-205ENST00000529898 ZNF385CQ66K41 422 aaPredicted RBP7.16□□□□□ -1.26
CTR9-205ENST00000529898 RHBDD1Q8TEB9 315 aa7.16□□□□□ -1.26
CTR9-205ENST00000529898 POM121CA8CG34 1229 aa7.15□□□□□ -1.26
CTR9-205ENST00000529898 UBAP2LQ14157 1087 aaKnown RBP7.15□□□□□ -1.26
CTR9-205ENST00000529898 TMEM214Q6NUQ4 689 aaKnown RBP7.15□□□□□ -1.26
CTR9-205ENST00000529898 FOXR1Q6PIV2 292 aa7.15□□□□□ -1.26
CTR9-205ENST00000529898 RIPOR1Q6ZS17 1223 aa7.15□□□□□ -1.26
CTR9-205ENST00000529898 GAS2L1Q99501 681 aaPredicted RBP7.15□□□□□ -1.26
CTR9-205ENST00000529898 MBIPQ9NS73 344 aa7.15□□□□□ -1.26
CTR9-205ENST00000529898 ADAMTS2O95450 1211 aa7.14□□□□□ -1.27
CTR9-205ENST00000529898 SKIP12755 728 aa7.14□□□□□ -1.27
CTR9-205ENST00000529898 SMTNP53814 917 aa7.14□□□□□ -1.27
CTR9-205ENST00000529898 TLR1Q15399 786 aa7.14□□□□□ -1.27
CTR9-205ENST00000529898 EML3Q32P44 896 aa7.14□□□□□ -1.27
CTR9-205ENST00000529898 PLEKHM2Q8IWE5 1019 aa7.14□□□□□ -1.27
CTR9-205ENST00000529898 WHAMMQ8TF30 809 aa7.14□□□□□ -1.27
CTR9-205ENST00000529898 GTPBP3Q969Y2 492 aaKnown RBP7.14□□□□□ -1.27
CTR9-205ENST00000529898 CFHR5Q9BXR6 569 aa7.14□□□□□ -1.27
CTR9-205ENST00000529898 NUCKS1Q9H1E3 243 aaKnown RBP7.14□□□□□ -1.27
CTR9-205ENST00000529898 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
CTR9-205ENST00000529898 CDK2AP1O14519 115 aa7.13□□□□□ -1.27
CTR9-205ENST00000529898 GTF2E1P29083 439 aaPredicted RBP7.13□□□□□ -1.27
CTR9-205ENST00000529898 KCNMA1Q12791 1236 aa7.13□□□□□ -1.27
CTR9-205ENST00000529898 CRISPLD1Q9H336 500 aa7.13□□□□□ -1.27
CTR9-205ENST00000529898 ADAMTS8Q9UP79 889 aa7.13□□□□□ -1.27
CTR9-205ENST00000529898 NOD1Q9Y239 953 aa7.13□□□□□ -1.27
CTR9-205ENST00000529898 USP17L5A8MUK1 530 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 MSX1P28360 303 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 PHKA2P46019 1235 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 GSK3AP49840 483 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 NCOA4Q13772 614 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 HDGFL1Q5TGJ6 251 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 C1orf216Q8TAB5 229 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 UCN2Q96RP3 112 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 LRRC4BQ9NT99 713 aa7.12□□□□□ -1.27
CTR9-205ENST00000529898 A6NJR5 290 aa7.11□□□□□ -1.27
CTR9-205ENST00000529898 A6NJY4 79 aa7.11□□□□□ -1.27
CTR9-205ENST00000529898 GPR25O00155 361 aa7.11□□□□□ -1.27
CTR9-205ENST00000529898 LYPD4Q6UWN0 246 aa7.11□□□□□ -1.27
CTR9-205ENST00000529898 TRERF1Q96PN7 1200 aa7.11□□□□□ -1.27
CTR9-205ENST00000529898 NIFKQ9BYG3 293 aaKnown RBP7.11□□□□□ -1.27
CTR9-205ENST00000529898 IGF1RP08069 1367 aa7.1□□□□□ -1.27
CTR9-205ENST00000529898 TTBK1Q5TCY1 1321 aaPredicted RBP7.1□□□□□ -1.27
CTR9-205ENST00000529898 ZBTB7BO15156 539 aaPredicted RBP7.1□□□□□ -1.27
CTR9-205ENST00000529898 CELA2BP08218 269 aaPredicted RBP7.1□□□□□ -1.27
CTR9-205ENST00000529898 GTF2IP78347 998 aa7.1□□□□□ -1.27
CTR9-205ENST00000529898 SVOPQ8N4V2 548 aa7.1□□□□□ -1.27
CTR9-205ENST00000529898 NDFIP2Q9NV92 336 aa7.1□□□□□ -1.27
CTR9-205ENST00000529898 BACH1O14867 736 aa7.09□□□□□ -1.27
CTR9-205ENST00000529898 ATP9BO43861 1147 aa7.09□□□□□ -1.27
CTR9-205ENST00000529898 EPHA4P54764 986 aa7.09□□□□□ -1.27
CTR9-205ENST00000529898 TBC1D9Q6ZT07 1266 aa7.09□□□□□ -1.27
CTR9-205ENST00000529898 PROSER2Q86WR7 435 aaPredicted RBP7.09□□□□□ -1.27
CTR9-205ENST00000529898 CLUAP1Q96AJ1 413 aa7.09□□□□□ -1.27
CTR9-205ENST00000529898 GPAMQ9HCL2 828 aa7.09□□□□□ -1.27
CTR9-205ENST00000529898 ATP4AP20648 1035 aa7.08□□□□□ -1.28
CTR9-205ENST00000529898 FOXK2Q01167 660 aa7.08□□□□□ -1.28
CTR9-205ENST00000529898 TRIM50Q86XT4 487 aa7.08□□□□□ -1.28
CTR9-205ENST00000529898 DNAAF2Q9NVR5 837 aaKnown RBP7.08□□□□□ -1.28
CTR9-205ENST00000529898 ZNF358Q9NW07 568 aa7.08□□□□□ -1.28
CTR9-205ENST00000529898 SCHIP1Q9P0W5 487 aaPredicted RBP7.08□□□□□ -1.28
CTR9-205ENST00000529898 SERTAD1Q9UHV2 236 aa7.08□□□□□ -1.28
CTR9-205ENST00000529898 PHF24Q9UPV7 400 aa7.08□□□□□ -1.28
CTR9-205ENST00000529898 USP17L3A6NCW0 530 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 USP17L4A6NCW7 530 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 CSB-PGBD3P0DP91 1061 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 MX2P20592 715 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 EFHC2Q5JST6 749 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 USP17L2Q6R6M4 530 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 USP17L1Q7RTZ2 530 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 NLRP8Q86W28 1048 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 PGBD3Q8N328 593 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 ACDQ96AP0 544 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 RUBCNLQ9H714 662 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 ZDHHC3Q9NYG2 299 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 ATXN7L1Q9ULK2 861 aaPredicted RBP7.07□□□□□ -1.28
CTR9-205ENST00000529898 USP3Q9Y6I4 520 aa7.07□□□□□ -1.28
CTR9-205ENST00000529898 M0R2N6 131 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 DKK1O94907 266 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 BCRP11274 1271 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 MAP2K3P46734 347 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 PLA2G4AP47712 749 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 CLDN10P78369 228 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 TEAD4Q15561 434 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 DEPDC4Q8N2C3 294 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 LARGE2Q8N3Y3 721 aa7.06□□□□□ -1.28
CTR9-205ENST00000529898 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.06□□□□□ -1.28
CTR9-205ENST00000529898 NSFL1CQ9UNZ2 370 aaKnown RBP7.06□□□□□ -1.28
CTR9-205ENST00000529898 BNIP3LO60238 219 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms