RNA–Protein interactions for RNA: ENST00000529640.5

UBXN1-210, Transcript of UBX domain protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBXN1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-210ENST00000529640 TGFB2P61812 414 aa23.57■■□□□ 1.36
UBXN1-210ENST00000529640 ASAP1Q9ULH1 1129 aa23.57■■□□□ 1.36
UBXN1-210ENST00000529640 ATP6V1AP38606 617 aa23.56■■□□□ 1.36
UBXN1-210ENST00000529640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.56■■□□□ 1.36
UBXN1-210ENST00000529640 EMILIN1Q9Y6C2 1016 aa23.56■■□□□ 1.36
UBXN1-210ENST00000529640 ARFGEF1Q9Y6D6 1849 aa23.56■■□□□ 1.36
UBXN1-210ENST00000529640 C4AP0C0L4 1744 aa23.56■■□□□ 1.36
UBXN1-210ENST00000529640 TMF1P82094 1093 aa23.55■■□□□ 1.36
UBXN1-210ENST00000529640 BCS1LQ9Y276 419 aa23.55■■□□□ 1.36
UBXN1-210ENST00000529640 COL5A3P25940 1745 aaPredicted RBP23.54■■□□□ 1.36
UBXN1-210ENST00000529640 KDRP35968 1356 aa23.53■■□□□ 1.36
UBXN1-210ENST00000529640 NMRK2Q9NPI5 230 aa23.53■■□□□ 1.36
UBXN1-210ENST00000529640 A0A0G2JLW4 131 aa23.52■■□□□ 1.36
UBXN1-210ENST00000529640 NLGN1Q8N2Q7 840 aa23.52■■□□□ 1.36
UBXN1-210ENST00000529640 ATG3Q9NT62 314 aa23.52■■□□□ 1.36
UBXN1-210ENST00000529640 PHKG2P15735 406 aa23.51■■□□□ 1.35
UBXN1-210ENST00000529640 ARHGAP27Q6ZUM4 889 aa23.51■■□□□ 1.35
UBXN1-210ENST00000529640 IFNL2Q8IZJ0 200 aa23.51■■□□□ 1.35
UBXN1-210ENST00000529640 RTCBQ9Y3I0 505 aaKnown RBP23.51■■□□□ 1.35
UBXN1-210ENST00000529640 TRAPPC3LQ5T215 181 aa23.5■■□□□ 1.35
UBXN1-210ENST00000529640 RBM46Q8TBY0 533 aaKnown RBP23.5■■□□□ 1.35
UBXN1-210ENST00000529640 PLEKHG2Q9H7P9 1386 aa23.5■■□□□ 1.35
UBXN1-210ENST00000529640 ADRA2BP18089 450 aa23.49■■□□□ 1.35
UBXN1-210ENST00000529640 EYA1Q99502 592 aa23.49■■□□□ 1.35
UBXN1-210ENST00000529640 CCDC87Q9NVE4 849 aa23.49■■□□□ 1.35
UBXN1-210ENST00000529640 WASHC2AQ641Q2 1341 aa23.49■■□□□ 1.35
UBXN1-210ENST00000529640 DPEP1P16444 411 aa23.48■■□□□ 1.35
UBXN1-210ENST00000529640 PPM1GO15355 546 aaPredicted RBP23.47■■□□□ 1.35
UBXN1-210ENST00000529640 FCHSD2O94868 740 aa23.47■■□□□ 1.35
UBXN1-210ENST00000529640 CDCA8Q53HL2 280 aa23.47■■□□□ 1.35
UBXN1-210ENST00000529640 CARD14Q9BXL6 1004 aa23.47■■□□□ 1.35
UBXN1-210ENST00000529640 MYH14Q7Z406 1995 aaKnown RBP23.47■■□□□ 1.35
UBXN1-210ENST00000529640 RC3H1Q5TC82 1133 aaKnown RBP23.46■■□□□ 1.35
UBXN1-210ENST00000529640 CNTNAP4Q9C0A0 1308 aa23.45■■□□□ 1.34
UBXN1-210ENST00000529640 GYS1P13807 737 aa23.45■■□□□ 1.34
UBXN1-210ENST00000529640 ARHGEF1Q92888 912 aaKnown RBP23.45■■□□□ 1.34
UBXN1-210ENST00000529640 KLRG1Q96E93 195 aa23.45■■□□□ 1.34
UBXN1-210ENST00000529640 SLC4A9Q96Q91 983 aa23.45■■□□□ 1.34
UBXN1-210ENST00000529640 TNRC6CQ9HCJ0 1690 aaKnown RBP23.44■■□□□ 1.34
UBXN1-210ENST00000529640 C9orf131Q5VYM1 1079 aa23.44■■□□□ 1.34
UBXN1-210ENST00000529640 C16orf71Q8IYS4 520 aaPredicted RBP23.44■■□□□ 1.34
UBXN1-210ENST00000529640 JMYQ8N9B5 988 aa23.44■■□□□ 1.34
UBXN1-210ENST00000529640 PARP3Q9Y6F1 533 aa23.44■■□□□ 1.34
UBXN1-210ENST00000529640 SBF1O95248 1867 aa23.43■■□□□ 1.34
UBXN1-210ENST00000529640 KCNA3P22001 575 aa23.43■■□□□ 1.34
UBXN1-210ENST00000529640 FSTL1Q12841 308 aa23.43■■□□□ 1.34
UBXN1-210ENST00000529640 RPS6KA4O75676 772 aa23.42■■□□□ 1.34
UBXN1-210ENST00000529640 RFC4P35249 363 aa23.42■■□□□ 1.34
UBXN1-210ENST00000529640 KCPQ6ZWJ8 1503 aa23.42■■□□□ 1.34
UBXN1-210ENST00000529640 ERVV-2B6SEH9 535 aa23.41■■□□□ 1.34
UBXN1-210ENST00000529640 KDM2BQ8NHM5 1336 aa23.4■■□□□ 1.34
UBXN1-210ENST00000529640 HTRA3P83110 453 aa23.4■■□□□ 1.34
UBXN1-210ENST00000529640 DCAF5Q96JK2 942 aa23.4■■□□□ 1.34
UBXN1-210ENST00000529640 RBM42Q9BTD8 480 aaKnown RBP23.4■■□□□ 1.34
UBXN1-210ENST00000529640 COL13A1Q5TAT6 717 aaPredicted RBP23.39■■□□□ 1.33
UBXN1-210ENST00000529640 PIM2Q9P1W9 311 aa23.39■■□□□ 1.33
UBXN1-210ENST00000529640 POLKQ9UBT6 870 aa23.39■■□□□ 1.33
UBXN1-210ENST00000529640 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
UBXN1-210ENST00000529640 KDM6AO15550 1401 aaPredicted RBP23.36■■□□□ 1.33
UBXN1-210ENST00000529640 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
UBXN1-210ENST00000529640 DALRD3Q5D0E6 543 aaKnown RBP23.36■■□□□ 1.33
UBXN1-210ENST00000529640 RNF181Q9P0P0 153 aa23.36■■□□□ 1.33
UBXN1-210ENST00000529640 TJP1Q07157 1748 aa23.35■■□□□ 1.33
UBXN1-210ENST00000529640 ADAMTS7Q9UKP4 1686 aa23.33■■□□□ 1.33
UBXN1-210ENST00000529640 USP42Q9H9J4 1324 aaKnown RBP23.33■■□□□ 1.32
UBXN1-210ENST00000529640 DDR1Q08345 913 aa23.32■■□□□ 1.32
UBXN1-210ENST00000529640 RRAGCQ9HB90 399 aa23.32■■□□□ 1.32
UBXN1-210ENST00000529640 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
UBXN1-210ENST00000529640 CABP4P57796 275 aa23.31■■□□□ 1.32
UBXN1-210ENST00000529640 FKBP8Q14318 412 aa23.31■■□□□ 1.32
UBXN1-210ENST00000529640 SMC1BQ8NDV3 1235 aa23.31■■□□□ 1.32
UBXN1-210ENST00000529640 SRP68Q9UHB9 627 aaKnown RBP23.31■■□□□ 1.32
UBXN1-210ENST00000529640 PCNTO95613 3336 aa23.3■■□□□ 1.32
UBXN1-210ENST00000529640 PLEKHO1Q53GL0 409 aaPredicted RBP23.3■■□□□ 1.32
UBXN1-210ENST00000529640 ZC3H4Q9UPT8 1303 aaKnown RBP23.3■■□□□ 1.32
UBXN1-210ENST00000529640 CHRNA5P30532 468 aa23.29■■□□□ 1.32
UBXN1-210ENST00000529640 ZNF530Q6P9A1 599 aaPredicted RBP23.29■■□□□ 1.32
UBXN1-210ENST00000529640 TNS4Q8IZW8 715 aa23.29■■□□□ 1.32
UBXN1-210ENST00000529640 DLEC1Q9Y238 1755 aa23.29■■□□□ 1.32
UBXN1-210ENST00000529640 AFDNP55196 1824 aaKnown RBP23.28■■□□□ 1.32
UBXN1-210ENST00000529640 PTCD1O75127 700 aaKnown RBP23.27■■□□□ 1.32
UBXN1-210ENST00000529640 CAPN15O75808 1086 aa23.27■■□□□ 1.32
UBXN1-210ENST00000529640 AMOTQ4VCS5 1084 aa23.27■■□□□ 1.32
UBXN1-210ENST00000529640 SCN11AQ9UI33 1791 aa23.27■■□□□ 1.32
UBXN1-210ENST00000529640 POLRMTO00411 1230 aaKnown RBP23.26■■□□□ 1.31
UBXN1-210ENST00000529640 PRELPP51888 382 aa23.26■■□□□ 1.31
UBXN1-210ENST00000529640 TIAM2Q8IVF5 1701 aa23.25■■□□□ 1.31
UBXN1-210ENST00000529640 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
UBXN1-210ENST00000529640 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
UBXN1-210ENST00000529640 CCDC88AQ3V6T2 1871 aa23.25■■□□□ 1.31
UBXN1-210ENST00000529640 TM4SF1P30408 202 aa23.24■■□□□ 1.31
UBXN1-210ENST00000529640 MTHFSP49914 203 aa23.24■■□□□ 1.31
UBXN1-210ENST00000529640 RASSF7Q02833 373 aa23.22■■□□□ 1.31
UBXN1-210ENST00000529640 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
UBXN1-210ENST00000529640 INTS5Q6P9B9 1019 aaKnown RBP23.22■■□□□ 1.31
UBXN1-210ENST00000529640 NFATC2IPQ8NCF5 419 aa23.22■■□□□ 1.31
UBXN1-210ENST00000529640 GLTPD2A6NH11 291 aa23.2■■□□□ 1.3
UBXN1-210ENST00000529640 VEGFAP15692 232 aaPredicted RBP23.2■■□□□ 1.3
UBXN1-210ENST00000529640 LMNB1P20700 586 aa23.2■■□□□ 1.3
UBXN1-210ENST00000529640 ZPR1O75312 459 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms