RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 KDRP35968 1356 aa24.01■■□□□ 1.43
CMTM1-213ENST00000529506 C4BP0C0L5 1744 aa24.01■■□□□ 1.43
CMTM1-213ENST00000529506 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24■■□□□ 1.43
CMTM1-213ENST00000529506 NPC1L1Q9UHC9 1359 aa24■■□□□ 1.43
CMTM1-213ENST00000529506 DIAPH1O60610 1272 aaKnown RBP23.99■■□□□ 1.43
CMTM1-213ENST00000529506 MSL1Q68DK7 614 aa23.99■■□□□ 1.43
CMTM1-213ENST00000529506 LINC00116Q8NCU8 138 aa23.99■■□□□ 1.43
CMTM1-213ENST00000529506 RBM42Q9BTD8 480 aaKnown RBP23.99■■□□□ 1.43
CMTM1-213ENST00000529506 PHF14O94880 888 aa23.98■■□□□ 1.43
CMTM1-213ENST00000529506 CD2APQ9Y5K6 639 aa23.98■■□□□ 1.43
CMTM1-213ENST00000529506 GNPATO15228 680 aa23.97■■□□□ 1.43
CMTM1-213ENST00000529506 ITPK1Q13572 414 aa23.97■■□□□ 1.43
CMTM1-213ENST00000529506 AKAP4Q5JQC9 854 aa23.97■■□□□ 1.43
CMTM1-213ENST00000529506 RC3H1Q5TC82 1133 aaKnown RBP23.97■■□□□ 1.43
CMTM1-213ENST00000529506 NFATC2IPQ8NCF5 419 aa23.96■■□□□ 1.43
CMTM1-213ENST00000529506 RTCBQ9Y3I0 505 aaKnown RBP23.96■■□□□ 1.43
CMTM1-213ENST00000529506 CHD4Q14839 1912 aa23.95■■□□□ 1.42
CMTM1-213ENST00000529506 GRIN3BO60391 1043 aa23.95■■□□□ 1.42
CMTM1-213ENST00000529506 TRAPPC3LQ5T215 181 aa23.95■■□□□ 1.42
CMTM1-213ENST00000529506 PELP1Q8IZL8 1130 aaKnown RBP23.95■■□□□ 1.42
CMTM1-213ENST00000529506 UBR3Q6ZT12 1888 aa23.94■■□□□ 1.42
CMTM1-213ENST00000529506 ADRA2BP18089 450 aa23.93■■□□□ 1.42
CMTM1-213ENST00000529506 KDM6AO15550 1401 aaPredicted RBP23.93■■□□□ 1.42
CMTM1-213ENST00000529506 HMOX1P09601 288 aa23.92■■□□□ 1.42
CMTM1-213ENST00000529506 NLGN2Q8NFZ4 835 aa23.92■■□□□ 1.42
CMTM1-213ENST00000529506 ZNF831Q5JPB2 1677 aa23.9■■□□□ 1.42
CMTM1-213ENST00000529506 PTCD1O75127 700 aaKnown RBP23.9■■□□□ 1.42
CMTM1-213ENST00000529506 AMIGO3Q86WK7 504 aa23.9■■□□□ 1.42
CMTM1-213ENST00000529506 NLGN1Q8N2Q7 840 aa23.9■■□□□ 1.42
CMTM1-213ENST00000529506 CNTNAP4Q9C0A0 1308 aa23.89■■□□□ 1.42
CMTM1-213ENST00000529506 RPS6KA4O75676 772 aa23.89■■□□□ 1.41
CMTM1-213ENST00000529506 CNGB1Q14028 1251 aaPredicted RBP23.89■■□□□ 1.41
CMTM1-213ENST00000529506 SLC4A9Q96Q91 983 aa23.89■■□□□ 1.41
CMTM1-213ENST00000529506 SMIM5Q71RC9 77 aa23.88■■□□□ 1.41
CMTM1-213ENST00000529506 CFAP53Q96M91 514 aa23.88■■□□□ 1.41
CMTM1-213ENST00000529506 SLC52A2Q9HAB3 445 aa23.88■■□□□ 1.41
CMTM1-213ENST00000529506 RFC4P35249 363 aa23.87■■□□□ 1.41
CMTM1-213ENST00000529506 U2SURPO15042 1029 aaKnown RBP23.86■■□□□ 1.41
CMTM1-213ENST00000529506 RNMTO43148 476 aaKnown RBP23.86■■□□□ 1.41
CMTM1-213ENST00000529506 ZNF784Q8NCA9 323 aaPredicted RBP23.86■■□□□ 1.41
CMTM1-213ENST00000529506 ARHGEF1Q92888 912 aaKnown RBP23.86■■□□□ 1.41
CMTM1-213ENST00000529506 MTHFSDQ2M296 383 aaKnown RBP23.85■■□□□ 1.41
CMTM1-213ENST00000529506 LGR6Q9HBX8 967 aa23.85■■□□□ 1.41
CMTM1-213ENST00000529506 SCN11AQ9UI33 1791 aa23.84■■□□□ 1.41
CMTM1-213ENST00000529506 NUDCQ9Y266 331 aa23.84■■□□□ 1.41
CMTM1-213ENST00000529506 MMP10P09238 476 aa23.82■■□□□ 1.4
CMTM1-213ENST00000529506 CRKLP46109 303 aaKnown RBP23.82■■□□□ 1.4
CMTM1-213ENST00000529506 GAS2L2Q8NHY3 880 aa23.82■■□□□ 1.4
CMTM1-213ENST00000529506 YBX3P16989 372 aaKnown RBP eCLIP23.8■■□□□ 1.4
CMTM1-213ENST00000529506 PARP3Q9Y6F1 533 aa23.79■■□□□ 1.4
CMTM1-213ENST00000529506 GNAT3A8MTJ3 354 aa23.78■■□□□ 1.4
CMTM1-213ENST00000529506 GYS1P13807 737 aa23.78■■□□□ 1.4
CMTM1-213ENST00000529506 VSIG10Q8N0Z9 540 aa23.78■■□□□ 1.4
CMTM1-213ENST00000529506 COL5A3P25940 1745 aaPredicted RBP23.78■■□□□ 1.4
CMTM1-213ENST00000529506 TGFB2P61812 414 aa23.77■■□□□ 1.4
CMTM1-213ENST00000529506 CCDC87Q9NVE4 849 aa23.77■■□□□ 1.4
CMTM1-213ENST00000529506 MYH14Q7Z406 1995 aaKnown RBP23.77■■□□□ 1.4
CMTM1-213ENST00000529506 UTRNP46939 3433 aa23.77■■□□□ 1.39
CMTM1-213ENST00000529506 TEFQ10587 303 aa23.76■■□□□ 1.39
CMTM1-213ENST00000529506 TTC5Q8N0Z6 440 aa23.76■■□□□ 1.39
CMTM1-213ENST00000529506 SLC39A6Q13433 755 aa23.75■■□□□ 1.39
CMTM1-213ENST00000529506 DNAJC10Q8IXB1 793 aa23.75■■□□□ 1.39
CMTM1-213ENST00000529506 COL3A1P02461 1466 aaPredicted RBP23.75■■□□□ 1.39
CMTM1-213ENST00000529506 ZPR1O75312 459 aa23.74■■□□□ 1.39
CMTM1-213ENST00000529506 INTS5Q6P9B9 1019 aaKnown RBP23.74■■□□□ 1.39
CMTM1-213ENST00000529506 PPP2R1AP30153 589 aa23.73■■□□□ 1.39
CMTM1-213ENST00000529506 TEX13AQ9BXU3 409 aaPredicted RBP23.73■■□□□ 1.39
CMTM1-213ENST00000529506 MRC1P22897 1456 aa23.73■■□□□ 1.39
CMTM1-213ENST00000529506 STARD3NLO95772 234 aa23.72■■□□□ 1.39
CMTM1-213ENST00000529506 CYP19A1P11511 503 aaPredicted RBP23.72■■□□□ 1.39
CMTM1-213ENST00000529506 VIRMAQ69YN4 1812 aaKnown RBP23.71■■□□□ 1.39
CMTM1-213ENST00000529506 FCHSD2O94868 740 aa23.71■■□□□ 1.39
CMTM1-213ENST00000529506 U2AF1L5P0DN76 240 aaPredicted RBP23.71■■□□□ 1.39
CMTM1-213ENST00000529506 U2AF1Q01081 240 aaKnown RBP eCLIP23.71■■□□□ 1.39
CMTM1-213ENST00000529506 IL17REQ8NFR9 667 aa23.71■■□□□ 1.39
CMTM1-213ENST00000529506 CICQ96RK0 1608 aaPredicted RBP23.7■■□□□ 1.39
CMTM1-213ENST00000529506 USP42Q9H9J4 1324 aaKnown RBP23.7■■□□□ 1.38
CMTM1-213ENST00000529506 PRKAR2BP31323 418 aa23.7■■□□□ 1.38
CMTM1-213ENST00000529506 RSPH6AQ9H0K4 717 aa23.69■■□□□ 1.38
CMTM1-213ENST00000529506 ADAMTS7Q9UKP4 1686 aa23.69■■□□□ 1.38
CMTM1-213ENST00000529506 ZNF790Q6PG37 636 aa23.68■■□□□ 1.38
CMTM1-213ENST00000529506 RTF1Q92541 710 aaKnown RBP23.68■■□□□ 1.38
CMTM1-213ENST00000529506 SRP68Q9UHB9 627 aaKnown RBP23.68■■□□□ 1.38
CMTM1-213ENST00000529506 TJP1Q07157 1748 aa23.67■■□□□ 1.38
CMTM1-213ENST00000529506 SOS1Q07889 1333 aaPredicted RBP23.67■■□□□ 1.38
CMTM1-213ENST00000529506 NEFMP07197 916 aa23.67■■□□□ 1.38
CMTM1-213ENST00000529506 FKBP8Q14318 412 aa23.67■■□□□ 1.38
CMTM1-213ENST00000529506 PHACTR3Q96KR7 559 aa23.67■■□□□ 1.38
CMTM1-213ENST00000529506 A0A087WZG4 1122 aa23.66■■□□□ 1.38
CMTM1-213ENST00000529506 NARFQ9UHQ1 456 aa23.66■■□□□ 1.38
CMTM1-213ENST00000529506 A0A0G2JLW4 131 aa23.65■■□□□ 1.38
CMTM1-213ENST00000529506 TM4SF1P30408 202 aa23.65■■□□□ 1.38
CMTM1-213ENST00000529506 FMNL2Q96PY5 1086 aa23.65■■□□□ 1.38
CMTM1-213ENST00000529506 C4AP0C0L4 1744 aa23.64■■□□□ 1.38
CMTM1-213ENST00000529506 KIF13BQ9NQT8 1826 aa23.64■■□□□ 1.38
CMTM1-213ENST00000529506 HTATSF1O43719 755 aaKnown RBP23.64■■□□□ 1.37
CMTM1-213ENST00000529506 USPL1Q5W0Q7 1092 aa23.64■■□□□ 1.37
CMTM1-213ENST00000529506 NPM2Q86SE8 214 aaKnown RBP23.64■■□□□ 1.37
CMTM1-213ENST00000529506 KCPQ6ZWJ8 1503 aa23.64■■□□□ 1.37
CMTM1-213ENST00000529506 BTBD11A6QL63 1104 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms