RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 ESCO1Q5FWF5 840 aa9.38□□□□□ -0.91
NUP98-216ENST00000529379 TRIM46Q7Z4K8 759 aa9.38□□□□□ -0.91
NUP98-216ENST00000529379 HOMEZQ8IX15 550 aa9.38□□□□□ -0.91
NUP98-216ENST00000529379 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
NUP98-216ENST00000529379 RBM19Q9Y4C8 960 aaKnown RBP9.38□□□□□ -0.91
NUP98-216ENST00000529379 HRH3Q9Y5N1 445 aa9.38□□□□□ -0.91
NUP98-216ENST00000529379 FAM69CQ0P6D2 419 aa9.37□□□□□ -0.91
NUP98-216ENST00000529379 CLN3Q13286 438 aa9.37□□□□□ -0.91
NUP98-216ENST00000529379 CNKSR1Q969H4 720 aa9.37□□□□□ -0.91
NUP98-216ENST00000529379 ESYT1Q9BSJ8 1104 aa9.37□□□□□ -0.91
NUP98-216ENST00000529379 M0R2N6 131 aa9.36□□□□□ -0.91
NUP98-216ENST00000529379 MEN1O00255 615 aa9.36□□□□□ -0.91
NUP98-216ENST00000529379 SPINT1O43278 529 aa9.36□□□□□ -0.91
NUP98-216ENST00000529379 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
NUP98-216ENST00000529379 ZNF787Q6DD87 383 aa9.36□□□□□ -0.91
NUP98-216ENST00000529379 TSEN2Q8NCE0 465 aaKnown RBP9.36□□□□□ -0.91
NUP98-216ENST00000529379 LGR5O75473 907 aa9.35□□□□□ -0.91
NUP98-216ENST00000529379 UPP2O95045 317 aa9.35□□□□□ -0.91
NUP98-216ENST00000529379 BMP2P12643 396 aa9.35□□□□□ -0.91
NUP98-216ENST00000529379 SLC4A9Q96Q91 983 aa9.35□□□□□ -0.91
NUP98-216ENST00000529379 PURBQ96QR8 312 aaKnown RBP9.35□□□□□ -0.91
NUP98-216ENST00000529379 INSM2Q96T92 566 aaPredicted RBP9.35□□□□□ -0.91
NUP98-216ENST00000529379 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
NUP98-216ENST00000529379 GMPR2Q9P2T1 348 aaKnown RBP9.35□□□□□ -0.91
NUP98-216ENST00000529379 USTQ9Y2C2 406 aa9.35□□□□□ -0.91
NUP98-216ENST00000529379 BACH1O14867 736 aa9.34□□□□□ -0.91
NUP98-216ENST00000529379 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
NUP98-216ENST00000529379 SMTNP53814 917 aa9.34□□□□□ -0.91
NUP98-216ENST00000529379 EPHA4P54764 986 aa9.34□□□□□ -0.91
NUP98-216ENST00000529379 CENPCQ03188 943 aa9.34□□□□□ -0.91
NUP98-216ENST00000529379 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
NUP98-216ENST00000529379 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
NUP98-216ENST00000529379 ATP13A2Q9NQ11 1180 aa9.34□□□□□ -0.91
NUP98-216ENST00000529379 FOXD4L5Q5VV16 416 aaPredicted RBP9.33□□□□□ -0.92
NUP98-216ENST00000529379 ZFP42Q96MM3 310 aa9.33□□□□□ -0.92
NUP98-216ENST00000529379 FHDC1Q9C0D6 1143 aaPredicted RBP9.33□□□□□ -0.92
NUP98-216ENST00000529379 A6NJY4 79 aa9.32□□□□□ -0.92
NUP98-216ENST00000529379 SCARF1Q14162 830 aa9.32□□□□□ -0.92
NUP98-216ENST00000529379 MTFR1Q15390 333 aa9.32□□□□□ -0.92
NUP98-216ENST00000529379 TLR1Q15399 786 aa9.32□□□□□ -0.92
NUP98-216ENST00000529379 SWI5Q1ZZU3 235 aa9.32□□□□□ -0.92
NUP98-216ENST00000529379 HINFPQ9BQA5 517 aa9.32□□□□□ -0.92
NUP98-216ENST00000529379 POLMQ9NP87 494 aaPredicted RBP9.32□□□□□ -0.92
NUP98-216ENST00000529379 RNF144AP50876 292 aaPredicted RBP9.31□□□□□ -0.92
NUP98-216ENST00000529379 CLP1Q92989 425 aaKnown RBP9.31□□□□□ -0.92
NUP98-216ENST00000529379 USP3Q9Y6I4 520 aa9.31□□□□□ -0.92
NUP98-216ENST00000529379 GPC1P35052 558 aa9.3□□□□□ -0.92
NUP98-216ENST00000529379 GRIP2Q9C0E4 1043 aa9.3□□□□□ -0.92
NUP98-216ENST00000529379 SOS2Q07890 1332 aaPredicted RBP9.3□□□□□ -0.92
NUP98-216ENST00000529379 SNRPBP14678 240 aaKnown RBP9.29□□□□□ -0.92
NUP98-216ENST00000529379 FOXK2Q01167 660 aa9.29□□□□□ -0.92
NUP98-216ENST00000529379 PDE4CQ08493 712 aa9.29□□□□□ -0.92
NUP98-216ENST00000529379 TBCELQ5QJ74 424 aa9.29□□□□□ -0.92
NUP98-216ENST00000529379 RNF217Q8TC41 542 aa9.29□□□□□ -0.92
NUP98-216ENST00000529379 ZSCAN10Q96SZ4 725 aaPredicted RBP9.29□□□□□ -0.92
NUP98-216ENST00000529379 TSPAN10Q9H1Z9 355 aaPredicted RBP9.29□□□□□ -0.92
NUP98-216ENST00000529379 SCHIP1Q9P0W5 487 aaPredicted RBP9.29□□□□□ -0.92
NUP98-216ENST00000529379 TTLL8A6PVC2 850 aa9.28□□□□□ -0.92
NUP98-216ENST00000529379 CDK2AP1O14519 115 aa9.28□□□□□ -0.92
NUP98-216ENST00000529379 PRMT3O60678 531 aa9.28□□□□□ -0.92
NUP98-216ENST00000529379 SLC27A3Q5K4L6 730 aa9.28□□□□□ -0.92
NUP98-216ENST00000529379 SLC9A9Q8IVB4 645 aa9.28□□□□□ -0.92
NUP98-216ENST00000529379 GAS2L2Q8NHY3 880 aa9.28□□□□□ -0.92
NUP98-216ENST00000529379 PRIMPOLQ96LW4 560 aa9.28□□□□□ -0.92
NUP98-216ENST00000529379 TRAIPQ9BWF2 469 aa9.28□□□□□ -0.92
NUP98-216ENST00000529379 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
NUP98-216ENST00000529379 C21orf2O43822 256 aa9.27□□□□□ -0.93
NUP98-216ENST00000529379 PDIA4P13667 645 aaKnown RBP9.27□□□□□ -0.93
NUP98-216ENST00000529379 WEE1P30291 646 aa9.27□□□□□ -0.93
NUP98-216ENST00000529379 OCLNQ16625 522 aa9.27□□□□□ -0.93
NUP98-216ENST00000529379 FIGNL2A6NMB9 653 aa9.26□□□□□ -0.93
NUP98-216ENST00000529379 PPARGC1BQ86YN6 1023 aaKnown RBP9.26□□□□□ -0.93
NUP98-216ENST00000529379 ZNF295-AS1Q8N0V1 137 aa9.26□□□□□ -0.93
NUP98-216ENST00000529379 SCG3Q8WXD2 468 aaKnown RBP9.26□□□□□ -0.93
NUP98-216ENST00000529379 ZNF775Q96BV0 537 aaPredicted RBP9.26□□□□□ -0.93
NUP98-216ENST00000529379 ATAD2Q6PL18 1390 aa9.25□□□□□ -0.93
NUP98-216ENST00000529379 ATP2B4P23634 1241 aa9.25□□□□□ -0.93
NUP98-216ENST00000529379 TMEM214Q6NUQ4 689 aaKnown RBP9.25□□□□□ -0.93
NUP98-216ENST00000529379 PRICKLE2Q7Z3G6 844 aa9.25□□□□□ -0.93
NUP98-216ENST00000529379 TRIM47Q96LD4 638 aa9.25□□□□□ -0.93
NUP98-216ENST00000529379 CXXC1Q9P0U4 656 aaPredicted RBP9.25□□□□□ -0.93
NUP98-216ENST00000529379 DNMT3LQ9UJW3 386 aa9.25□□□□□ -0.93
NUP98-216ENST00000529379 C11orf95C9JLR9 678 aaPredicted RBP9.24□□□□□ -0.93
NUP98-216ENST00000529379 IGFBP4P22692 258 aa9.24□□□□□ -0.93
NUP98-216ENST00000529379 SSFA2P28290 1259 aa9.24□□□□□ -0.93
NUP98-216ENST00000529379 PHLDB3Q6NSJ2 640 aa9.24□□□□□ -0.93
NUP98-216ENST00000529379 LYSMD3Q7Z3D4 306 aa9.24□□□□□ -0.93
NUP98-216ENST00000529379 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
NUP98-216ENST00000529379 SPATA31C2B4DYI2 1134 aa9.23□□□□□ -0.93
NUP98-216ENST00000529379 POU4F2Q12837 409 aa9.23□□□□□ -0.93
NUP98-216ENST00000529379 C4orf17Q53FE4 359 aa9.23□□□□□ -0.93
NUP98-216ENST00000529379 NBPF15Q8N660 670 aa9.23□□□□□ -0.93
NUP98-216ENST00000529379 RHBDD1Q8TEB9 315 aa9.23□□□□□ -0.93
NUP98-216ENST00000529379 ZDHHC1Q8WTX9 485 aa9.23□□□□□ -0.93
NUP98-216ENST00000529379 CABP1Q9NZU7 370 aa9.23□□□□□ -0.93
NUP98-216ENST00000529379 PPP1R12BO60237 982 aaPredicted RBP9.22□□□□□ -0.93
NUP98-216ENST00000529379 GTF2E1P29083 439 aaPredicted RBP9.22□□□□□ -0.93
NUP98-216ENST00000529379 SCNN1AP37088 669 aa9.22□□□□□ -0.93
NUP98-216ENST00000529379 FKBP5Q13451 457 aaPredicted RBP9.22□□□□□ -0.93
NUP98-216ENST00000529379 CHMP7Q8WUX9 453 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms