RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 TBC1D2Q9BYX2 928 aa16.44■□□□□ 0.22
RBM39-243ENST00000528062 EP400Q96L91 3159 aa16.44■□□□□ 0.22
RBM39-243ENST00000528062 FCHSD2O94868 740 aa16.44■□□□□ 0.22
RBM39-243ENST00000528062 ZKSCAN2Q63HK3 967 aa16.44■□□□□ 0.22
RBM39-243ENST00000528062 OVOS2A0A0G2JMS6 1433 aa16.43■□□□□ 0.22
RBM39-243ENST00000528062 DZIP1LQ8IYY4 767 aaKnown RBP16.43■□□□□ 0.22
RBM39-243ENST00000528062 EXOSC9Q06265 439 aaKnown RBP16.42■□□□□ 0.22
RBM39-243ENST00000528062 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
RBM39-243ENST00000528062 TRIM35Q9UPQ4 493 aa16.41■□□□□ 0.22
RBM39-243ENST00000528062 TRIM27P14373 513 aa16.41■□□□□ 0.22
RBM39-243ENST00000528062 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
RBM39-243ENST00000528062 GJD4Q96KN9 370 aaPredicted RBP16.41■□□□□ 0.22
RBM39-243ENST00000528062 TRPC5Q9UL62 973 aaPredicted RBP16.41■□□□□ 0.22
RBM39-243ENST00000528062 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
RBM39-243ENST00000528062 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
RBM39-243ENST00000528062 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
RBM39-243ENST00000528062 SMC4Q9NTJ3 1288 aa16.4■□□□□ 0.22
RBM39-243ENST00000528062 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
RBM39-243ENST00000528062 BRWD3Q6RI45 1802 aa16.39■□□□□ 0.21
RBM39-243ENST00000528062 IL2RBP14784 551 aa16.39■□□□□ 0.21
RBM39-243ENST00000528062 BARGINQ6ZT62 677 aa16.39■□□□□ 0.21
RBM39-243ENST00000528062 THRAP3Q9Y2W1 955 aaKnown RBP16.39■□□□□ 0.21
RBM39-243ENST00000528062 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
RBM39-243ENST00000528062 FAM98CQ17RN3 349 aaKnown RBP16.38■□□□□ 0.21
RBM39-243ENST00000528062 POTEAQ6S8J7 498 aa16.38■□□□□ 0.21
RBM39-243ENST00000528062 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
RBM39-243ENST00000528062 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
RBM39-243ENST00000528062 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.38■□□□□ 0.21
RBM39-243ENST00000528062 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
RBM39-243ENST00000528062 PLEKHG2Q9H7P9 1386 aa16.37■□□□□ 0.21
RBM39-243ENST00000528062 TNS2Q63HR2 1409 aa16.37■□□□□ 0.21
RBM39-243ENST00000528062 ADAMTS7Q9UKP4 1686 aa16.36■□□□□ 0.21
RBM39-243ENST00000528062 HDAC1Q13547 482 aaPredicted RBP16.36■□□□□ 0.21
RBM39-243ENST00000528062 ITPRIPQ8IWB1 547 aa16.36■□□□□ 0.21
RBM39-243ENST00000528062 SPRYD3Q8NCJ5 442 aa16.36■□□□□ 0.21
RBM39-243ENST00000528062 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
RBM39-243ENST00000528062 ATF7IPQ6VMQ6 1270 aa16.36■□□□□ 0.21
RBM39-243ENST00000528062 NOB1Q9ULX3 412 aaKnown RBP16.36■□□□□ 0.21
RBM39-243ENST00000528062 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
RBM39-243ENST00000528062 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
RBM39-243ENST00000528062 MFAP1P55081 439 aaKnown RBP16.35■□□□□ 0.21
RBM39-243ENST00000528062 SCN11AQ9UI33 1791 aa16.35■□□□□ 0.21
RBM39-243ENST00000528062 CYP27B1O15528 508 aa16.34■□□□□ 0.21
RBM39-243ENST00000528062 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
RBM39-243ENST00000528062 C22orf23Q9BZE7 217 aa16.34■□□□□ 0.21
RBM39-243ENST00000528062 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
RBM39-243ENST00000528062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.33■□□□□ 0.22e-26■■■□□ 15.2
RBM39-243ENST00000528062 NFE2L2Q16236 605 aa16.33■□□□□ 0.2
RBM39-243ENST00000528062 SMC5Q8IY18 1101 aa16.33■□□□□ 0.2
RBM39-243ENST00000528062 RIPK4P57078 832 aa16.32■□□□□ 0.2
RBM39-243ENST00000528062 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
RBM39-243ENST00000528062 ZBTB40Q9NUA8 1239 aa16.32■□□□□ 0.2
RBM39-243ENST00000528062 RGS12O14924 1447 aa16.32■□□□□ 0.2
RBM39-243ENST00000528062 IL16Q14005 1332 aa16.32■□□□□ 0.2
RBM39-243ENST00000528062 RBM6P78332 1123 aaKnown RBP16.31■□□□□ 0.2
RBM39-243ENST00000528062 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
RBM39-243ENST00000528062 KDM6AO15550 1401 aaPredicted RBP16.31■□□□□ 0.2
RBM39-243ENST00000528062 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
RBM39-243ENST00000528062 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
RBM39-243ENST00000528062 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
RBM39-243ENST00000528062 CDCA7Q9BWT1 371 aaPredicted RBP16.31■□□□□ 0.2
RBM39-243ENST00000528062 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
RBM39-243ENST00000528062 DOT1LQ8TEK3 1739 aa16.3■□□□□ 0.2
RBM39-243ENST00000528062 PHKG2P15735 406 aa16.3■□□□□ 0.2
RBM39-243ENST00000528062 GAS2L2Q8NHY3 880 aa16.3■□□□□ 0.2
RBM39-243ENST00000528062 DDB1Q16531 1140 aa16.29■□□□□ 0.2
RBM39-243ENST00000528062 SEPT12Q8IYM1 358 aa16.29■□□□□ 0.2
RBM39-243ENST00000528062 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
RBM39-243ENST00000528062 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
RBM39-243ENST00000528062 MAP3K5Q99683 1374 aa16.29■□□□□ 0.2
RBM39-243ENST00000528062 PCDH11XQ9BZA7 1347 aa16.29■□□□□ 0.2
RBM39-243ENST00000528062 PCDH11YQ9BZA8 1340 aa16.29■□□□□ 0.2
RBM39-243ENST00000528062 ITGB4P16144 1822 aa16.29■□□□□ 0.2
RBM39-243ENST00000528062 MARCH10Q8NA82 808 aaPredicted RBP16.29■□□□□ 0.2
RBM39-243ENST00000528062 SBF2Q86WG5 1849 aa16.28■□□□□ 0.2
RBM39-243ENST00000528062 MCM4P33991 863 aa16.28■□□□□ 0.2
RBM39-243ENST00000528062 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
RBM39-243ENST00000528062 EXOC5O00471 708 aa16.28■□□□□ 0.2
RBM39-243ENST00000528062 RXRBP28702 533 aa16.28■□□□□ 0.2
RBM39-243ENST00000528062 THUMPD2Q9BTF0 503 aaKnown RBP16.28■□□□□ 0.2
RBM39-243ENST00000528062 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.2
RBM39-243ENST00000528062 DDX54Q8TDD1 881 aaKnown RBP16.27■□□□□ 0.2
RBM39-243ENST00000528062 IL17REQ8NFR9 667 aa16.27■□□□□ 0.19
RBM39-243ENST00000528062 LGR6Q9HBX8 967 aa16.27■□□□□ 0.19
RBM39-243ENST00000528062 CEMIPQ8WUJ3 1361 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 NUCB1Q02818 461 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 MCM10Q7L590 875 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 IFNL2Q8IZJ0 200 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 MRC1P22897 1456 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 A0A0G2JS52 829 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 GNAT3A8MTJ3 354 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
RBM39-243ENST00000528062 FAM182BQ5T319 152 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
RBM39-243ENST00000528062 LNPKQ9C0E8 428 aa16.25■□□□□ 0.19
RBM39-243ENST00000528062 CHMP5Q9NZZ3 219 aa16.25■□□□□ 0.19
RBM39-243ENST00000528062 C1orf141Q5JVX7 400 aa16.24■□□□□ 0.19
RBM39-243ENST00000528062 L1TD1Q5T7N2 865 aaKnown RBP16.24■□□□□ 0.19
RBM39-243ENST00000528062 ARXQ96QS3 562 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms