RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PHF14O94880 888 aa20.87■□□□□ 0.93
CAPN1-213ENST00000527897 POLD1P28340 1107 aa20.87■□□□□ 0.93
CAPN1-213ENST00000527897 KLHL34Q8N239 644 aa20.87■□□□□ 0.93
CAPN1-213ENST00000527897 NFATC2IPQ8NCF5 419 aa20.87■□□□□ 0.93
CAPN1-213ENST00000527897 LINC00116Q8NCU8 138 aa20.87■□□□□ 0.93
CAPN1-213ENST00000527897 ARXQ96QS3 562 aa20.87■□□□□ 0.93
CAPN1-213ENST00000527897 ITPK1Q13572 414 aa20.86■□□□□ 0.93
CAPN1-213ENST00000527897 MTHFSDQ2M296 383 aaKnown RBP20.86■□□□□ 0.93
CAPN1-213ENST00000527897 MSL1Q68DK7 614 aa20.86■□□□□ 0.93
CAPN1-213ENST00000527897 SMIM5Q71RC9 77 aa20.86■□□□□ 0.93
CAPN1-213ENST00000527897 SGIP1Q9BQI5 828 aa20.86■□□□□ 0.93
CAPN1-213ENST00000527897 FHDC1Q9C0D6 1143 aaPredicted RBP20.86■□□□□ 0.93
CAPN1-213ENST00000527897 SCN11AQ9UI33 1791 aa20.86■□□□□ 0.93
CAPN1-213ENST00000527897 LGR6Q9HBX8 967 aa20.85■□□□□ 0.93
CAPN1-213ENST00000527897 VIRMAQ69YN4 1812 aaKnown RBP20.84■□□□□ 0.93
CAPN1-213ENST00000527897 PTCD1O75127 700 aaKnown RBP20.84■□□□□ 0.93
CAPN1-213ENST00000527897 DCAF8L1A6NGE4 600 aa20.83■□□□□ 0.93
CAPN1-213ENST00000527897 FLAD1Q8NFF5 587 aa20.83■□□□□ 0.93
CAPN1-213ENST00000527897 NUDCQ9Y266 331 aa20.83■□□□□ 0.93
CAPN1-213ENST00000527897 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
CAPN1-213ENST00000527897 GNPATO15228 680 aa20.82■□□□□ 0.92
CAPN1-213ENST00000527897 RNMTO43148 476 aaKnown RBP20.82■□□□□ 0.92
CAPN1-213ENST00000527897 AMIGO3Q86WK7 504 aa20.82■□□□□ 0.92
CAPN1-213ENST00000527897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.81■□□□□ 0.92
CAPN1-213ENST00000527897 U2AF1L5P0DN76 240 aaPredicted RBP20.81■□□□□ 0.92
CAPN1-213ENST00000527897 U2AF1Q01081 240 aaKnown RBP eCLIP20.81■□□□□ 0.92
CAPN1-213ENST00000527897 SLC4A9Q96Q91 983 aa20.81■□□□□ 0.92
CAPN1-213ENST00000527897 SYT17Q9BSW7 474 aa20.81■□□□□ 0.92
CAPN1-213ENST00000527897 PRKAR2BP31323 418 aa20.8■□□□□ 0.92
CAPN1-213ENST00000527897 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
CAPN1-213ENST00000527897 SLC52A2Q9HAB3 445 aa20.8■□□□□ 0.92
CAPN1-213ENST00000527897 SSFA2P28290 1259 aa20.78■□□□□ 0.92
CAPN1-213ENST00000527897 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
CAPN1-213ENST00000527897 SLC39A6Q13433 755 aa20.77■□□□□ 0.92
CAPN1-213ENST00000527897 RSPH6AQ9H0K4 717 aa20.77■□□□□ 0.92
CAPN1-213ENST00000527897 COL24A1Q17RW2 1714 aa20.77■□□□□ 0.92
CAPN1-213ENST00000527897 MAP3K5Q99683 1374 aa20.76■□□□□ 0.91
CAPN1-213ENST00000527897 RTCBQ9Y3I0 505 aaKnown RBP20.76■□□□□ 0.91
CAPN1-213ENST00000527897 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
CAPN1-213ENST00000527897 ZNF831Q5JPB2 1677 aa20.75■□□□□ 0.91
CAPN1-213ENST00000527897 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
CAPN1-213ENST00000527897 PHACTR3Q96KR7 559 aa20.75■□□□□ 0.91
CAPN1-213ENST00000527897 MRC1P22897 1456 aa20.74■□□□□ 0.91
CAPN1-213ENST00000527897 TEFQ10587 303 aa20.73■□□□□ 0.91
CAPN1-213ENST00000527897 TRAPPC3LQ5T215 181 aa20.73■□□□□ 0.91
CAPN1-213ENST00000527897 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
CAPN1-213ENST00000527897 ADAMTS7Q9UKP4 1686 aa20.72■□□□□ 0.91
CAPN1-213ENST00000527897 CNTNAP4Q9C0A0 1308 aa20.72■□□□□ 0.91
CAPN1-213ENST00000527897 TJP1Q07157 1748 aa20.71■□□□□ 0.91
CAPN1-213ENST00000527897 CRKLP46109 303 aaKnown RBP20.71■□□□□ 0.91
CAPN1-213ENST00000527897 RC3H1Q5TC82 1133 aaKnown RBP20.71■□□□□ 0.91
CAPN1-213ENST00000527897 IL17REQ8NFR9 667 aa20.71■□□□□ 0.91
CAPN1-213ENST00000527897 MYH14Q7Z406 1995 aaKnown RBP20.71■□□□□ 0.91
CAPN1-213ENST00000527897 FCHSD2O94868 740 aa20.7■□□□□ 0.9
CAPN1-213ENST00000527897 DNAJC10Q8IXB1 793 aa20.7■□□□□ 0.9
CAPN1-213ENST00000527897 TTC5Q8N0Z6 440 aa20.7■□□□□ 0.9
CAPN1-213ENST00000527897 NLGN2Q8NFZ4 835 aa20.7■□□□□ 0.9
CAPN1-213ENST00000527897 RPS6KA4O75676 772 aa20.69■□□□□ 0.9
CAPN1-213ENST00000527897 RFC4P35249 363 aa20.69■□□□□ 0.9
CAPN1-213ENST00000527897 ARHGEF1Q92888 912 aaKnown RBP20.69■□□□□ 0.9
CAPN1-213ENST00000527897 NEFMP07197 916 aa20.68■□□□□ 0.9
CAPN1-213ENST00000527897 RALBP1Q15311 655 aa20.68■□□□□ 0.9
CAPN1-213ENST00000527897 GPR162Q16538 588 aa20.68■□□□□ 0.9
CAPN1-213ENST00000527897 RTF1Q92541 710 aaKnown RBP20.68■□□□□ 0.9
CAPN1-213ENST00000527897 KCPQ6ZWJ8 1503 aa20.67■□□□□ 0.9
CAPN1-213ENST00000527897 ADRA2BP18089 450 aa20.66■□□□□ 0.9
CAPN1-213ENST00000527897 YY1P25490 414 aa20.66■□□□□ 0.9
CAPN1-213ENST00000527897 ZEB1P37275 1124 aaPredicted RBP20.66■□□□□ 0.9
CAPN1-213ENST00000527897 MCM10Q7L590 875 aa20.66■□□□□ 0.9
CAPN1-213ENST00000527897 GOLGB1Q14789 3259 aaKnown RBP20.65■□□□□ 0.9
CAPN1-213ENST00000527897 MMP10P09238 476 aa20.65■□□□□ 0.9
CAPN1-213ENST00000527897 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
CAPN1-213ENST00000527897 UTRNP46939 3433 aa20.65■□□□□ 0.9
CAPN1-213ENST00000527897 SIPA1L3O60292 1781 aaPredicted RBP20.64■□□□□ 0.9
CAPN1-213ENST00000527897 C4AP0C0L4 1744 aa20.64■□□□□ 0.9
CAPN1-213ENST00000527897 CICQ96RK0 1608 aaPredicted RBP20.64■□□□□ 0.9
CAPN1-213ENST00000527897 DCTN1Q14203 1278 aa20.64■□□□□ 0.89
CAPN1-213ENST00000527897 INTS5Q6P9B9 1019 aaKnown RBP20.64■□□□□ 0.89
CAPN1-213ENST00000527897 UBR2Q8IWV8 1755 aa20.64■□□□□ 0.89
CAPN1-213ENST00000527897 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
CAPN1-213ENST00000527897 ZNF790Q6PG37 636 aa20.63■□□□□ 0.89
CAPN1-213ENST00000527897 SRP68Q9UHB9 627 aaKnown RBP20.63■□□□□ 0.89
CAPN1-213ENST00000527897 CEMIPQ8WUJ3 1361 aa20.62■□□□□ 0.89
CAPN1-213ENST00000527897 CYP19A1P11511 503 aaPredicted RBP20.62■□□□□ 0.89
CAPN1-213ENST00000527897 NLGN1Q8N2Q7 840 aa20.62■□□□□ 0.89
CAPN1-213ENST00000527897 ZNF496Q96IT1 587 aaPredicted RBP20.62■□□□□ 0.89
CAPN1-213ENST00000527897 GYS1P13807 737 aa20.61■□□□□ 0.89
CAPN1-213ENST00000527897 WWC3Q9ULE0 1092 aa20.61■□□□□ 0.89
CAPN1-213ENST00000527897 CD2APQ9Y5K6 639 aa20.61■□□□□ 0.89
CAPN1-213ENST00000527897 MYBBP1AQ9BQG0 1328 aaKnown RBP20.6■□□□□ 0.89
CAPN1-213ENST00000527897 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
CAPN1-213ENST00000527897 KCNQ3O43525 872 aa20.6■□□□□ 0.89
CAPN1-213ENST00000527897 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
CAPN1-213ENST00000527897 VSIG10Q8N0Z9 540 aa20.6■□□□□ 0.89
CAPN1-213ENST00000527897 ZBTB1Q9Y2K1 713 aa20.6■□□□□ 0.89
CAPN1-213ENST00000527897 DLG5Q8TDM6 1919 aa20.59■□□□□ 0.89
CAPN1-213ENST00000527897 STARD3NLO95772 234 aa20.59■□□□□ 0.89
CAPN1-213ENST00000527897 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
CAPN1-213ENST00000527897 HEG1Q9ULI3 1381 aa20.59■□□□□ 0.89
CAPN1-213ENST00000527897 USP42Q9H9J4 1324 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms