RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 SLC52A2Q9HAB3 445 aa11.81□□□□□ -0.52
CDC27-204ENST00000527547 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
CDC27-204ENST00000527547 SCN11AQ9UI33 1791 aa11.81□□□□□ -0.52
CDC27-204ENST00000527547 NWD2Q9ULI1 1742 aa11.81□□□□□ -0.52
CDC27-204ENST00000527547 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.81□□□□□ -0.52
CDC27-204ENST00000527547 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
CDC27-204ENST00000527547 FNBP4Q8N3X1 1017 aaPredicted RBP11.8□□□□□ -0.52
CDC27-204ENST00000527547 USP21Q9UK80 565 aa11.8□□□□□ -0.52
CDC27-204ENST00000527547 RLBP1P12271 317 aa11.8□□□□□ -0.52
CDC27-204ENST00000527547 EIF4A1P60842 406 aaKnown RBP11.8□□□□□ -0.52
CDC27-204ENST00000527547 FAM98CQ17RN3 349 aaKnown RBP11.79□□□□□ -0.52
CDC27-204ENST00000527547 ALDH1L2Q3SY69 923 aa11.79□□□□□ -0.52
CDC27-204ENST00000527547 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
CDC27-204ENST00000527547 SIPA1L3O60292 1781 aaPredicted RBP11.79□□□□□ -0.52
CDC27-204ENST00000527547 PLEKHG2Q9H7P9 1386 aa11.79□□□□□ -0.52
CDC27-204ENST00000527547 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
CDC27-204ENST00000527547 EXOC5O00471 708 aa11.79□□□□□ -0.52
CDC27-204ENST00000527547 CABP4P57796 275 aa11.79□□□□□ -0.52
CDC27-204ENST00000527547 B4GALNT3Q6L9W6 998 aa11.79□□□□□ -0.52
CDC27-204ENST00000527547 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
CDC27-204ENST00000527547 HSP90AB1P08238 724 aaKnown RBP11.78□□□□□ -0.52
CDC27-204ENST00000527547 BABAM1Q9NWV8 329 aa11.78□□□□□ -0.52
CDC27-204ENST00000527547 AFF2P51816 1311 aa11.78□□□□□ -0.52
CDC27-204ENST00000527547 WNK3Q9BYP7 1800 aa11.78□□□□□ -0.52
CDC27-204ENST00000527547 TRIM27P14373 513 aa11.78□□□□□ -0.52
CDC27-204ENST00000527547 COG6Q9Y2V7 657 aa11.78□□□□□ -0.52
CDC27-204ENST00000527547 EIF2S2P20042 333 aaKnown RBP11.77□□□□□ -0.52
CDC27-204ENST00000527547 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.52
CDC27-204ENST00000527547 VPS72Q15906 364 aa11.77□□□□□ -0.52
CDC27-204ENST00000527547 ZKSCAN2Q63HK3 967 aa11.77□□□□□ -0.52
CDC27-204ENST00000527547 DDB1Q16531 1140 aa11.77□□□□□ -0.53
CDC27-204ENST00000527547 ZNF790Q6PG37 636 aa11.77□□□□□ -0.53
CDC27-204ENST00000527547 THRAP3Q9Y2W1 955 aaKnown RBP11.77□□□□□ -0.53
CDC27-204ENST00000527547 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.53
CDC27-204ENST00000527547 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 PPP4R2Q9NY27 417 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 MRC1P22897 1456 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 A0A0G2JS52 829 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 MYT1Q01538 1121 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 ATF7IPQ6VMQ6 1270 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 G2E3Q7L622 706 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 TNS2Q63HR2 1409 aa11.76□□□□□ -0.53
CDC27-204ENST00000527547 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
CDC27-204ENST00000527547 PDE3AQ14432 1141 aa11.75□□□□□ -0.53
CDC27-204ENST00000527547 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
CDC27-204ENST00000527547 ERICH6BQ5W0A0 696 aa11.75□□□□□ -0.53
CDC27-204ENST00000527547 MARCH10Q8NA82 808 aaPredicted RBP11.75□□□□□ -0.53
CDC27-204ENST00000527547 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
CDC27-204ENST00000527547 KIF16BQ96L93 1317 aa11.75□□□□□ -0.53
CDC27-204ENST00000527547 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
CDC27-204ENST00000527547 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
CDC27-204ENST00000527547 ANXA1P04083 346 aa11.74□□□□□ -0.53
CDC27-204ENST00000527547 FTSJ3Q8IY81 847 aaKnown RBP11.74□□□□□ -0.53
CDC27-204ENST00000527547 DZIP1LQ8IYY4 767 aaKnown RBP11.74□□□□□ -0.53
CDC27-204ENST00000527547 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
CDC27-204ENST00000527547 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
CDC27-204ENST00000527547 TTC5Q8N0Z6 440 aa11.74□□□□□ -0.53
CDC27-204ENST00000527547 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
CDC27-204ENST00000527547 CDCA7Q9BWT1 371 aaPredicted RBP11.74□□□□□ -0.53
CDC27-204ENST00000527547 CCDC30Q5VVM6 783 aa11.73□□□□□ -0.53
CDC27-204ENST00000527547 TMEM57Q8N5G2 664 aa11.73□□□□□ -0.53
CDC27-204ENST00000527547 PIGBQ92521 554 aa11.73□□□□□ -0.53
CDC27-204ENST00000527547 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
CDC27-204ENST00000527547 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
CDC27-204ENST00000527547 IPO8O15397 1037 aaKnown RBP11.73□□□□□ -0.53
CDC27-204ENST00000527547 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
CDC27-204ENST00000527547 FAM182BQ5T319 152 aa11.73□□□□□ -0.53
CDC27-204ENST00000527547 GJD4Q96KN9 370 aaPredicted RBP11.73□□□□□ -0.53
CDC27-204ENST00000527547 STK31Q9BXU1 1019 aa11.73□□□□□ -0.53
CDC27-204ENST00000527547 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
CDC27-204ENST00000527547 GLI3P10071 1580 aa11.72□□□□□ -0.53
CDC27-204ENST00000527547 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
CDC27-204ENST00000527547 PHAXQ9H814 394 aaKnown RBP11.72□□□□□ -0.53
CDC27-204ENST00000527547 ASAP1Q9ULH1 1129 aa11.72□□□□□ -0.53
CDC27-204ENST00000527547 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
CDC27-204ENST00000527547 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.72□□□□□ -0.53
CDC27-204ENST00000527547 PIP4K2AP48426 406 aaPredicted RBP11.72□□□□□ -0.53
CDC27-204ENST00000527547 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
CDC27-204ENST00000527547 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
CDC27-204ENST00000527547 ITPRIPQ8IWB1 547 aa11.72□□□□□ -0.53
CDC27-204ENST00000527547 C5P01031 1676 aa11.71□□□□□ -0.53
CDC27-204ENST00000527547 MVPQ14764 893 aaKnown RBP11.71□□□□□ -0.53
CDC27-204ENST00000527547 QTRT2Q9H974 415 aaKnown RBP11.71□□□□□ -0.53
CDC27-204ENST00000527547 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
CDC27-204ENST00000527547 F6X3S4 739 aa11.71□□□□□ -0.54
CDC27-204ENST00000527547 ITGB4P16144 1822 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 RGS12O14924 1447 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 FLIIQ13045 1269 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 DOT1LQ8TEK3 1739 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 ATRNO75882 1429 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 HOXB7P09629 217 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 ARHGAP45Q92619 1136 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 ATG3Q9NT62 314 aa11.7□□□□□ -0.54
CDC27-204ENST00000527547 TRPC5Q9UL62 973 aaPredicted RBP11.7□□□□□ -0.54
CDC27-204ENST00000527547 KCNQ2O43526 872 aa11.69□□□□□ -0.54
CDC27-204ENST00000527547 ABCC4O15439 1325 aa11.69□□□□□ -0.54
CDC27-204ENST00000527547 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
CDC27-204ENST00000527547 BCL9O00512 1426 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms