RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 KIF13BQ9NQT8 1826 aa28.63■■■□□ 2.17
PKP3-205ENST00000527442 PPM1GO15355 546 aaPredicted RBP28.62■■■□□ 2.17
PKP3-205ENST00000527442 ITPK1Q13572 414 aa28.61■■■□□ 2.17
PKP3-205ENST00000527442 TMOD3Q9NYL9 352 aa28.6■■■□□ 2.17
PKP3-205ENST00000527442 ASAP1Q9ULH1 1129 aa28.6■■■□□ 2.17
PKP3-205ENST00000527442 N4BP2Q86UW6 1770 aaPredicted RBP28.6■■■□□ 2.17
PKP3-205ENST00000527442 DDX10Q13206 875 aaKnown RBP28.59■■■□□ 2.17
PKP3-205ENST00000527442 EYA1Q99502 592 aa28.59■■■□□ 2.17
PKP3-205ENST00000527442 GNPATO15228 680 aa28.58■■■□□ 2.17
PKP3-205ENST00000527442 HSPA6P17066 643 aa28.58■■■□□ 2.17
PKP3-205ENST00000527442 PXDNLA1KZ92 1463 aa28.56■■■□□ 2.16
PKP3-205ENST00000527442 PHKG2P15735 406 aa28.56■■■□□ 2.16
PKP3-205ENST00000527442 COL5A3P25940 1745 aaPredicted RBP28.56■■■□□ 2.16
PKP3-205ENST00000527442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.56■■■□□ 2.16
PKP3-205ENST00000527442 ZNF831Q5JPB2 1677 aa28.55■■■□□ 2.16
PKP3-205ENST00000527442 ATP6V1AP38606 617 aa28.55■■■□□ 2.16
PKP3-205ENST00000527442 KDRP35968 1356 aa28.54■■■□□ 2.16
PKP3-205ENST00000527442 IFNL2Q8IZJ0 200 aa28.53■■■□□ 2.16
PKP3-205ENST00000527442 ATG3Q9NT62 314 aa28.53■■■□□ 2.16
PKP3-205ENST00000527442 MMP10P09238 476 aa28.52■■■□□ 2.16
PKP3-205ENST00000527442 KIF3CO14782 793 aa28.51■■■□□ 2.15
PKP3-205ENST00000527442 POLKQ9UBT6 870 aa28.51■■■□□ 2.15
PKP3-205ENST00000527442 BRCA1P38398 1863 aaKnown RBP28.51■■■□□ 2.15
PKP3-205ENST00000527442 C4AP0C0L4 1744 aa28.5■■■□□ 2.15
PKP3-205ENST00000527442 C10orf71Q711Q0 1435 aa28.48■■■□□ 2.15
PKP3-205ENST00000527442 EIF4A2Q14240 407 aaKnown RBP28.47■■■□□ 2.15
PKP3-205ENST00000527442 DIEXFQ68CQ4 756 aaKnown RBP28.47■■■□□ 2.15
PKP3-205ENST00000527442 SLC4A9Q96Q91 983 aa28.47■■■□□ 2.15
PKP3-205ENST00000527442 PANK3Q9H999 370 aa28.46■■■□□ 2.15
PKP3-205ENST00000527442 MYH14Q7Z406 1995 aaKnown RBP28.45■■■□□ 2.14
PKP3-205ENST00000527442 PLEKHG2Q9H7P9 1386 aa28.45■■■□□ 2.14
PKP3-205ENST00000527442 RTCBQ9Y3I0 505 aaKnown RBP28.44■■■□□ 2.14
PKP3-205ENST00000527442 TRAPPC3LQ5T215 181 aa28.43■■■□□ 2.14
PKP3-205ENST00000527442 A0A0G2JLW4 131 aa28.42■■■□□ 2.14
PKP3-205ENST00000527442 TNNT2P45379 298 aaPredicted RBP28.42■■■□□ 2.14
PKP3-205ENST00000527442 BCS1LQ9Y276 419 aa28.42■■■□□ 2.14
PKP3-205ENST00000527442 ARFGEF1Q9Y6D6 1849 aa28.41■■■□□ 2.14
PKP3-205ENST00000527442 PER1O15534 1290 aaPredicted RBP28.41■■■□□ 2.14
PKP3-205ENST00000527442 TGFB2P61812 414 aa28.41■■■□□ 2.14
PKP3-205ENST00000527442 NLGN1Q8N2Q7 840 aa28.41■■■□□ 2.14
PKP3-205ENST00000527442 RBM42Q9BTD8 480 aaKnown RBP28.41■■■□□ 2.14
PKP3-205ENST00000527442 KDM6AO15550 1401 aaPredicted RBP28.41■■■□□ 2.14
PKP3-205ENST00000527442 ERVV-2B6SEH9 535 aa28.39■■■□□ 2.14
PKP3-205ENST00000527442 ARHGEF1Q92888 912 aaKnown RBP28.39■■■□□ 2.14
PKP3-205ENST00000527442 CNTNAP4Q9C0A0 1308 aa28.39■■■□□ 2.13
PKP3-205ENST00000527442 GYS1P13807 737 aa28.38■■■□□ 2.13
PKP3-205ENST00000527442 RC3H1Q5TC82 1133 aaKnown RBP28.38■■■□□ 2.13
PKP3-205ENST00000527442 TJP1Q07157 1748 aa28.38■■■□□ 2.13
PKP3-205ENST00000527442 DPEP1P16444 411 aa28.37■■■□□ 2.13
PKP3-205ENST00000527442 ADRA2BP18089 450 aa28.37■■■□□ 2.13
PKP3-205ENST00000527442 DCAF5Q96JK2 942 aa28.36■■■□□ 2.13
PKP3-205ENST00000527442 CCDC87Q9NVE4 849 aa28.36■■■□□ 2.13
PKP3-205ENST00000527442 NPC1L1Q9UHC9 1359 aa28.36■■■□□ 2.13
PKP3-205ENST00000527442 RPS6KA4O75676 772 aa28.35■■■□□ 2.13
PKP3-205ENST00000527442 ARHGAP27Q6ZUM4 889 aa28.35■■■□□ 2.13
PKP3-205ENST00000527442 RFC4P35249 363 aa28.34■■■□□ 2.13
PKP3-205ENST00000527442 WDR90Q96KV7 1748 aa28.33■■■□□ 2.13
PKP3-205ENST00000527442 FCHSD2O94868 740 aa28.33■■■□□ 2.13
PKP3-205ENST00000527442 HSP90AB1P08238 724 aaKnown RBP28.33■■■□□ 2.13
PKP3-205ENST00000527442 ZNF530Q6P9A1 599 aaPredicted RBP28.33■■■□□ 2.13
PKP3-205ENST00000527442 NMRK2Q9NPI5 230 aa28.33■■■□□ 2.13
PKP3-205ENST00000527442 TOMM70O94826 608 aa28.32■■■□□ 2.12
PKP3-205ENST00000527442 APLP1P51693 650 aa28.32■■■□□ 2.12
PKP3-205ENST00000527442 PLEKHO1Q53GL0 409 aaPredicted RBP28.32■■■□□ 2.12
PKP3-205ENST00000527442 KNSTRNQ9Y448 316 aa28.32■■■□□ 2.12
PKP3-205ENST00000527442 PARP3Q9Y6F1 533 aa28.32■■■□□ 2.12
PKP3-205ENST00000527442 CABP4P57796 275 aa28.31■■■□□ 2.12
PKP3-205ENST00000527442 ADAMTS7Q9UKP4 1686 aa28.31■■■□□ 2.12
PKP3-205ENST00000527442 SCN11AQ9UI33 1791 aa28.3■■■□□ 2.12
PKP3-205ENST00000527442 KCNA3P22001 575 aa28.3■■■□□ 2.12
PKP3-205ENST00000527442 AMER1Q5JTC6 1135 aaPredicted RBP28.29■■■□□ 2.12
PKP3-205ENST00000527442 PTCD1O75127 700 aaKnown RBP28.28■■■□□ 2.12
PKP3-205ENST00000527442 AEBP1Q8IUX7 1158 aa28.28■■■□□ 2.12
PKP3-205ENST00000527442 SRP68Q9UHB9 627 aaKnown RBP28.27■■■□□ 2.12
PKP3-205ENST00000527442 CRKLP46109 303 aaKnown RBP28.26■■■□□ 2.11
PKP3-205ENST00000527442 AMOTQ4VCS5 1084 aa28.26■■■□□ 2.11
PKP3-205ENST00000527442 DNAJC5GQ8N7S2 189 aa28.26■■■□□ 2.11
PKP3-205ENST00000527442 SBF1O95248 1867 aa28.25■■■□□ 2.11
PKP3-205ENST00000527442 USP42Q9H9J4 1324 aaKnown RBP28.25■■■□□ 2.11
PKP3-205ENST00000527442 DDR1Q08345 913 aa28.25■■■□□ 2.11
PKP3-205ENST00000527442 C9orf131Q5VYM1 1079 aa28.25■■■□□ 2.11
PKP3-205ENST00000527442 MTHFSP49914 203 aa28.24■■■□□ 2.11
PKP3-205ENST00000527442 FKBP8Q14318 412 aa28.24■■■□□ 2.11
PKP3-205ENST00000527442 VIRMAQ69YN4 1812 aaKnown RBP28.24■■■□□ 2.11
PKP3-205ENST00000527442 ANP32CO43423 234 aa28.23■■■□□ 2.11
PKP3-205ENST00000527442 C1orf141Q5JVX7 400 aa28.23■■■□□ 2.11
PKP3-205ENST00000527442 KCPQ6ZWJ8 1503 aa28.23■■■□□ 2.11
PKP3-205ENST00000527442 NFATC2IPQ8NCF5 419 aa28.22■■■□□ 2.11
PKP3-205ENST00000527442 PIM2Q9P1W9 311 aa28.22■■■□□ 2.11
PKP3-205ENST00000527442 TNRC6CQ9HCJ0 1690 aaKnown RBP28.22■■■□□ 2.11
PKP3-205ENST00000527442 AFDNP55196 1824 aaKnown RBP28.2■■■□□ 2.11
PKP3-205ENST00000527442 RBM46Q8TBY0 533 aaKnown RBP28.2■■■□□ 2.1
PKP3-205ENST00000527442 PRKRIP1Q9H875 184 aaPredicted RBP28.2■■■□□ 2.1
PKP3-205ENST00000527442 CHRNA5P30532 468 aa28.19■■■□□ 2.1
PKP3-205ENST00000527442 DALRD3Q5D0E6 543 aaKnown RBP28.19■■■□□ 2.1
PKP3-205ENST00000527442 SULT6B1Q6IMI4 303 aa28.17■■■□□ 2.1
PKP3-205ENST00000527442 INTS5Q6P9B9 1019 aaKnown RBP28.17■■■□□ 2.1
PKP3-205ENST00000527442 RNF181Q9P0P0 153 aa28.17■■■□□ 2.1
PKP3-205ENST00000527442 DLEC1Q9Y238 1755 aa28.16■■■□□ 2.1
PKP3-205ENST00000527442 RALBP1Q15311 655 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms