RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 APLP1P51693 650 aa16.1■□□□□ 0.17
RPUSD4-203ENST00000526942 TMOD3Q9NYL9 352 aa16.1■□□□□ 0.17
RPUSD4-203ENST00000526942 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
RPUSD4-203ENST00000526942 MIER1Q8N108 512 aa16.1■□□□□ 0.17
RPUSD4-203ENST00000526942 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
RPUSD4-203ENST00000526942 ATP6V1AP38606 617 aa16.09■□□□□ 0.17
RPUSD4-203ENST00000526942 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
RPUSD4-203ENST00000526942 C10orf71Q711Q0 1435 aa16.08■□□□□ 0.16
RPUSD4-203ENST00000526942 TOMM70O94826 608 aa16.08■□□□□ 0.16
RPUSD4-203ENST00000526942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPUSD4-203ENST00000526942 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
RPUSD4-203ENST00000526942 N4BP2Q86UW6 1770 aaPredicted RBP16.07■□□□□ 0.16
RPUSD4-203ENST00000526942 TGFB2P61812 414 aa16.07■□□□□ 0.16
RPUSD4-203ENST00000526942 KDRP35968 1356 aa16.07■□□□□ 0.16
RPUSD4-203ENST00000526942 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
RPUSD4-203ENST00000526942 PHKG2P15735 406 aa16.06■□□□□ 0.16
RPUSD4-203ENST00000526942 DNAJC5GQ8N7S2 189 aa16.06■□□□□ 0.16
RPUSD4-203ENST00000526942 ATG3Q9NT62 314 aa16.06■□□□□ 0.16
RPUSD4-203ENST00000526942 IFNL2Q8IZJ0 200 aa16.05■□□□□ 0.16
RPUSD4-203ENST00000526942 EYA1Q99502 592 aa16.05■□□□□ 0.16
RPUSD4-203ENST00000526942 CARD14Q9BXL6 1004 aa16.05■□□□□ 0.16
RPUSD4-203ENST00000526942 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
RPUSD4-203ENST00000526942 A0A0G2JLW4 131 aa16.05■□□□□ 0.16
RPUSD4-203ENST00000526942 RTCBQ9Y3I0 505 aaKnown RBP16.05■□□□□ 0.16
RPUSD4-203ENST00000526942 CDCA8Q53HL2 280 aa16.04■□□□□ 0.16
RPUSD4-203ENST00000526942 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
RPUSD4-203ENST00000526942 NMRK2Q9NPI5 230 aa16.04■□□□□ 0.16
RPUSD4-203ENST00000526942 C4AP0C0L4 1744 aa16.03■□□□□ 0.16
RPUSD4-203ENST00000526942 TRAPPC3LQ5T215 181 aa16.03■□□□□ 0.16
RPUSD4-203ENST00000526942 ARHGAP27Q6ZUM4 889 aa16.03■□□□□ 0.16
RPUSD4-203ENST00000526942 ZNF831Q5JPB2 1677 aa16.03■□□□□ 0.16
RPUSD4-203ENST00000526942 DPEP1P16444 411 aa16.03■□□□□ 0.16
RPUSD4-203ENST00000526942 SLC4A9Q96Q91 983 aa16.03■□□□□ 0.16
RPUSD4-203ENST00000526942 CCDC87Q9NVE4 849 aa16.03■□□□□ 0.16
RPUSD4-203ENST00000526942 WDR90Q96KV7 1748 aa16.02■□□□□ 0.16
RPUSD4-203ENST00000526942 FCHSD2O94868 740 aa16.02■□□□□ 0.15
RPUSD4-203ENST00000526942 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.15
RPUSD4-203ENST00000526942 BRCA1P38398 1863 aaKnown RBP16.02■□□□□ 0.15
RPUSD4-203ENST00000526942 COL5A3P25940 1745 aaPredicted RBP16.01■□□□□ 0.15
RPUSD4-203ENST00000526942 ADRA2BP18089 450 aa16.01■□□□□ 0.15
RPUSD4-203ENST00000526942 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
RPUSD4-203ENST00000526942 PLEKHG2Q9H7P9 1386 aa16.01■□□□□ 0.15
RPUSD4-203ENST00000526942 GYS1P13807 737 aa16■□□□□ 0.15
RPUSD4-203ENST00000526942 RC3H1Q5TC82 1133 aaKnown RBP16■□□□□ 0.15
RPUSD4-203ENST00000526942 RBM46Q8TBY0 533 aaKnown RBP16■□□□□ 0.15
RPUSD4-203ENST00000526942 CNTNAP4Q9C0A0 1308 aa16■□□□□ 0.15
RPUSD4-203ENST00000526942 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
RPUSD4-203ENST00000526942 PARP3Q9Y6F1 533 aa16■□□□□ 0.15
RPUSD4-203ENST00000526942 C9orf131Q5VYM1 1079 aa15.99■□□□□ 0.15
RPUSD4-203ENST00000526942 POLKQ9UBT6 870 aa15.99■□□□□ 0.15
RPUSD4-203ENST00000526942 RPS6KA4O75676 772 aa15.98■□□□□ 0.15
RPUSD4-203ENST00000526942 KCNA3P22001 575 aa15.98■□□□□ 0.15
RPUSD4-203ENST00000526942 RFC4P35249 363 aa15.98■□□□□ 0.15
RPUSD4-203ENST00000526942 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
RPUSD4-203ENST00000526942 ERVV-2B6SEH9 535 aa15.98■□□□□ 0.15
RPUSD4-203ENST00000526942 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
RPUSD4-203ENST00000526942 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
RPUSD4-203ENST00000526942 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
RPUSD4-203ENST00000526942 KCPQ6ZWJ8 1503 aa15.96■□□□□ 0.15
RPUSD4-203ENST00000526942 HTRA3P83110 453 aa15.96■□□□□ 0.15
RPUSD4-203ENST00000526942 HSP90AB1P08238 724 aaKnown RBP15.95■□□□□ 0.14
RPUSD4-203ENST00000526942 FSTL1Q12841 308 aa15.95■□□□□ 0.14
RPUSD4-203ENST00000526942 DCAF5Q96JK2 942 aa15.95■□□□□ 0.14
RPUSD4-203ENST00000526942 PIM2Q9P1W9 311 aa15.95■□□□□ 0.14
RPUSD4-203ENST00000526942 KDM6AO15550 1401 aaPredicted RBP15.95■□□□□ 0.14
RPUSD4-203ENST00000526942 MYH14Q7Z406 1995 aaKnown RBP15.95■□□□□ 0.14
RPUSD4-203ENST00000526942 JMYQ8N9B5 988 aa15.95■□□□□ 0.14
RPUSD4-203ENST00000526942 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
RPUSD4-203ENST00000526942 DALRD3Q5D0E6 543 aaKnown RBP15.93■□□□□ 0.14
RPUSD4-203ENST00000526942 RNF181Q9P0P0 153 aa15.93■□□□□ 0.14
RPUSD4-203ENST00000526942 CABP4P57796 275 aa15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 DDR1Q08345 913 aa15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 COL13A1Q5TAT6 717 aaPredicted RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 SRP68Q9UHB9 627 aaKnown RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 TNNT2P45379 298 aaPredicted RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 CRKLP46109 303 aaKnown RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 FKBP8Q14318 412 aa15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 PLEKHO1Q53GL0 409 aaPredicted RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
RPUSD4-203ENST00000526942 PTCD1O75127 700 aaKnown RBP15.91■□□□□ 0.14
RPUSD4-203ENST00000526942 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
RPUSD4-203ENST00000526942 TJP1Q07157 1748 aa15.9■□□□□ 0.14
RPUSD4-203ENST00000526942 CHRNA5P30532 468 aa15.9■□□□□ 0.14
RPUSD4-203ENST00000526942 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
RPUSD4-203ENST00000526942 ADAMTS7Q9UKP4 1686 aa15.88■□□□□ 0.13
RPUSD4-203ENST00000526942 POLRMTO00411 1230 aaKnown RBP15.88■□□□□ 0.13
RPUSD4-203ENST00000526942 SBF1O95248 1867 aa15.87■□□□□ 0.13
RPUSD4-203ENST00000526942 MTHFSP49914 203 aa15.87■□□□□ 0.13
RPUSD4-203ENST00000526942 SMC1BQ8NDV3 1235 aa15.87■□□□□ 0.13
RPUSD4-203ENST00000526942 PCNTO95613 3336 aa15.87■□□□□ 0.13
RPUSD4-203ENST00000526942 NFATC2IPQ8NCF5 419 aa15.87■□□□□ 0.13
RPUSD4-203ENST00000526942 ZC3H4Q9UPT8 1303 aaKnown RBP15.86■□□□□ 0.13
RPUSD4-203ENST00000526942 TM4SF1P30408 202 aa15.86■□□□□ 0.13
RPUSD4-203ENST00000526942 RASSF7Q02833 373 aa15.86■□□□□ 0.13
RPUSD4-203ENST00000526942 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
RPUSD4-203ENST00000526942 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
RPUSD4-203ENST00000526942 CAPN15O75808 1086 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms