RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 ATG3Q9NT62 314 aa20.79■□□□□ 0.92
PACS1-203ENST00000524815 TMF1P82094 1093 aa20.78■□□□□ 0.92
PACS1-203ENST00000524815 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
PACS1-203ENST00000524815 KIF20BQ96Q89 1820 aa20.78■□□□□ 0.92
PACS1-203ENST00000524815 N4BP2Q86UW6 1770 aaPredicted RBP20.77■□□□□ 0.92
PACS1-203ENST00000524815 PHKG2P15735 406 aa20.77■□□□□ 0.92
PACS1-203ENST00000524815 ARHGAP27Q6ZUM4 889 aa20.77■□□□□ 0.92
PACS1-203ENST00000524815 EYA1Q99502 592 aa20.77■□□□□ 0.92
PACS1-203ENST00000524815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.77■□□□□ 0.92
PACS1-203ENST00000524815 C10orf71Q711Q0 1435 aa20.77■□□□□ 0.91
PACS1-203ENST00000524815 DPEP1P16444 411 aa20.76■□□□□ 0.91
PACS1-203ENST00000524815 PPM1GO15355 546 aaPredicted RBP20.75■□□□□ 0.91
PACS1-203ENST00000524815 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
PACS1-203ENST00000524815 IFNL2Q8IZJ0 200 aa20.75■□□□□ 0.91
PACS1-203ENST00000524815 NLGN1Q8N2Q7 840 aa20.75■□□□□ 0.91
PACS1-203ENST00000524815 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
PACS1-203ENST00000524815 WASHC2AQ641Q2 1341 aa20.75■□□□□ 0.91
PACS1-203ENST00000524815 KDRP35968 1356 aa20.74■□□□□ 0.91
PACS1-203ENST00000524815 ARHGEF1Q92888 912 aaKnown RBP20.74■□□□□ 0.91
PACS1-203ENST00000524815 RTCBQ9Y3I0 505 aaKnown RBP20.74■□□□□ 0.91
PACS1-203ENST00000524815 FCHSD2O94868 740 aa20.73■□□□□ 0.91
PACS1-203ENST00000524815 GYS1P13807 737 aa20.72■□□□□ 0.91
PACS1-203ENST00000524815 KCNA3P22001 575 aa20.72■□□□□ 0.91
PACS1-203ENST00000524815 HTRA3P83110 453 aa20.72■□□□□ 0.91
PACS1-203ENST00000524815 RBM46Q8TBY0 533 aaKnown RBP20.72■□□□□ 0.91
PACS1-203ENST00000524815 C9orf131Q5VYM1 1079 aa20.71■□□□□ 0.91
PACS1-203ENST00000524815 CCDC87Q9NVE4 849 aa20.71■□□□□ 0.91
PACS1-203ENST00000524815 ANKRD26Q9UPS8 1709 aa20.7■□□□□ 0.9
PACS1-203ENST00000524815 RC3H1Q5TC82 1133 aaKnown RBP20.7■□□□□ 0.9
PACS1-203ENST00000524815 C4AP0C0L4 1744 aa20.7■□□□□ 0.9
PACS1-203ENST00000524815 WDR90Q96KV7 1748 aa20.7■□□□□ 0.9
PACS1-203ENST00000524815 ADRA2BP18089 450 aa20.69■□□□□ 0.9
PACS1-203ENST00000524815 COL13A1Q5TAT6 717 aaPredicted RBP20.69■□□□□ 0.9
PACS1-203ENST00000524815 KLRG1Q96E93 195 aa20.69■□□□□ 0.9
PACS1-203ENST00000524815 BRCA1P38398 1863 aaKnown RBP20.69■□□□□ 0.9
PACS1-203ENST00000524815 RPS6KA4O75676 772 aa20.68■□□□□ 0.9
PACS1-203ENST00000524815 JMYQ8N9B5 988 aa20.68■□□□□ 0.9
PACS1-203ENST00000524815 RBM42Q9BTD8 480 aaKnown RBP20.68■□□□□ 0.9
PACS1-203ENST00000524815 POLKQ9UBT6 870 aa20.68■□□□□ 0.9
PACS1-203ENST00000524815 PARP3Q9Y6F1 533 aa20.68■□□□□ 0.9
PACS1-203ENST00000524815 CNTNAP4Q9C0A0 1308 aa20.68■□□□□ 0.9
PACS1-203ENST00000524815 RFC4P35249 363 aa20.67■□□□□ 0.9
PACS1-203ENST00000524815 CDCA8Q53HL2 280 aa20.67■□□□□ 0.9
PACS1-203ENST00000524815 ZNF831Q5JPB2 1677 aa20.67■□□□□ 0.9
PACS1-203ENST00000524815 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
PACS1-203ENST00000524815 FSTL1Q12841 308 aa20.66■□□□□ 0.9
PACS1-203ENST00000524815 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
PACS1-203ENST00000524815 PLEKHG2Q9H7P9 1386 aa20.65■□□□□ 0.9
PACS1-203ENST00000524815 EIF4A2Q14240 407 aaKnown RBP20.65■□□□□ 0.9
PACS1-203ENST00000524815 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
PACS1-203ENST00000524815 PIM2Q9P1W9 311 aa20.65■□□□□ 0.9
PACS1-203ENST00000524815 COL5A3P25940 1745 aaPredicted RBP20.64■□□□□ 0.9
PACS1-203ENST00000524815 KCPQ6ZWJ8 1503 aa20.64■□□□□ 0.9
PACS1-203ENST00000524815 ARFGEF1Q9Y6D6 1849 aa20.64■□□□□ 0.89
PACS1-203ENST00000524815 RRAGCQ9HB90 399 aa20.63■□□□□ 0.89
PACS1-203ENST00000524815 DALRD3Q5D0E6 543 aaKnown RBP20.62■□□□□ 0.89
PACS1-203ENST00000524815 RNF181Q9P0P0 153 aa20.62■□□□□ 0.89
PACS1-203ENST00000524815 MYH14Q7Z406 1995 aaKnown RBP20.62■□□□□ 0.89
PACS1-203ENST00000524815 KDM2BQ8NHM5 1336 aa20.61■□□□□ 0.89
PACS1-203ENST00000524815 DDR1Q08345 913 aa20.61■□□□□ 0.89
PACS1-203ENST00000524815 FKBP8Q14318 412 aa20.61■□□□□ 0.89
PACS1-203ENST00000524815 SRP68Q9UHB9 627 aaKnown RBP20.61■□□□□ 0.89
PACS1-203ENST00000524815 KDM6AO15550 1401 aaPredicted RBP20.6■□□□□ 0.89
PACS1-203ENST00000524815 HSP90AB1P08238 724 aaKnown RBP20.59■□□□□ 0.89
PACS1-203ENST00000524815 CHRNA5P30532 468 aa20.59■□□□□ 0.89
PACS1-203ENST00000524815 PCNTO95613 3336 aa20.59■□□□□ 0.89
PACS1-203ENST00000524815 PTCD1O75127 700 aaKnown RBP20.58■□□□□ 0.89
PACS1-203ENST00000524815 CRKLP46109 303 aaKnown RBP20.58■□□□□ 0.89
PACS1-203ENST00000524815 CABP4P57796 275 aa20.58■□□□□ 0.89
PACS1-203ENST00000524815 USP42Q9H9J4 1324 aaKnown RBP20.57■□□□□ 0.88
PACS1-203ENST00000524815 CAPN15O75808 1086 aa20.57■□□□□ 0.88
PACS1-203ENST00000524815 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
PACS1-203ENST00000524815 PLEKHO1Q53GL0 409 aaPredicted RBP20.56■□□□□ 0.88
PACS1-203ENST00000524815 ZNF530Q6P9A1 599 aaPredicted RBP20.56■□□□□ 0.88
PACS1-203ENST00000524815 POLRMTO00411 1230 aaKnown RBP20.55■□□□□ 0.88
PACS1-203ENST00000524815 TM4SF1P30408 202 aa20.55■□□□□ 0.88
PACS1-203ENST00000524815 TNS4Q8IZW8 715 aa20.55■□□□□ 0.88
PACS1-203ENST00000524815 SMC1BQ8NDV3 1235 aa20.55■□□□□ 0.88
PACS1-203ENST00000524815 SBF1O95248 1867 aa20.55■□□□□ 0.88
PACS1-203ENST00000524815 INTS5Q6P9B9 1019 aaKnown RBP20.54■□□□□ 0.88
PACS1-203ENST00000524815 TNRC6CQ9HCJ0 1690 aaKnown RBP20.54■□□□□ 0.88
PACS1-203ENST00000524815 MTHFSP49914 203 aa20.53■□□□□ 0.88
PACS1-203ENST00000524815 AMOTQ4VCS5 1084 aa20.53■□□□□ 0.88
PACS1-203ENST00000524815 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
PACS1-203ENST00000524815 PRELPP51888 382 aa20.52■□□□□ 0.88
PACS1-203ENST00000524815 RASSF7Q02833 373 aa20.52■□□□□ 0.88
PACS1-203ENST00000524815 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
PACS1-203ENST00000524815 TJP1Q07157 1748 aa20.5■□□□□ 0.87
PACS1-203ENST00000524815 AEBP1Q8IUX7 1158 aa20.5■□□□□ 0.87
PACS1-203ENST00000524815 USPL1Q5W0Q7 1092 aa20.49■□□□□ 0.87
PACS1-203ENST00000524815 ZC3H4Q9UPT8 1303 aaKnown RBP20.49■□□□□ 0.87
PACS1-203ENST00000524815 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
PACS1-203ENST00000524815 HSPA1AP0DMV8 641 aaKnown RBP20.47■□□□□ 0.87
PACS1-203ENST00000524815 HSPA1BP0DMV9 641 aaKnown RBP20.47■□□□□ 0.87
PACS1-203ENST00000524815 VEGFAP15692 232 aaPredicted RBP20.47■□□□□ 0.87
PACS1-203ENST00000524815 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
PACS1-203ENST00000524815 ZPR1O75312 459 aa20.46■□□□□ 0.87
PACS1-203ENST00000524815 LMNB1P20700 586 aa20.46■□□□□ 0.87
PACS1-203ENST00000524815 DNAJC10Q8IXB1 793 aa20.46■□□□□ 0.87
PACS1-203ENST00000524815 SOS1Q07889 1333 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms