RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 DEUP1Q05D60 604 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 HNRNPUL2Q1KMD3 747 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 HHATQ5VTY9 493 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 MSL1Q68DK7 614 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 SPC24Q8NBT2 197 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 KCNV2Q8TDN2 545 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 CDC5LQ99459 802 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 RANBP17Q9H2T7 1088 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 DCTN1Q14203 1278 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 DNAJC21Q5F1R6 531 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 RRP12Q5JTH9 1297 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 ARHGEF1Q92888 912 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 MPHOSPH6Q99547 160 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 LMNB1P20700 586 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 ABL2P42684 1182 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 NMIQ13287 307 aaPredicted RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 NAA25Q14CX7 972 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 CEP135Q66GS9 1140 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 C1orf131Q8NDD1 294 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 BICD1Q96G01 975 aa8.1□□□□□ -1.11
LIN7C-202ENST00000524596 SPAG9O60271 1321 aaKnown RBP8.1□□□□□ -1.11
LIN7C-202ENST00000524596 KLHL33A6NCF5 533 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 ZFXP17010 805 aaPredicted RBP8.09□□□□□ -1.11
LIN7C-202ENST00000524596 ACBD5Q5T8D3 534 aaPredicted RBP8.09□□□□□ -1.11
LIN7C-202ENST00000524596 ITM2BQ9Y287 266 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 BIRC3Q13489 604 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 LRRCC1Q9C099 1032 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 TMOD4Q9NZQ9 345 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 RABL2AQ9UBK7 228 aaPredicted RBP8.09□□□□□ -1.11
LIN7C-202ENST00000524596 TBCAO75347 108 aaKnown RBP8.09□□□□□ -1.11
LIN7C-202ENST00000524596 KRT38O76015 456 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 GJA8P48165 433 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 XPCQ01831 940 aaPredicted RBP8.09□□□□□ -1.11
LIN7C-202ENST00000524596 TRIM42Q8IWZ5 723 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 CHMP5Q9NZZ3 219 aa8.09□□□□□ -1.11
LIN7C-202ENST00000524596 SLC4A3P48751 1232 aa8.09□□□□□ -1.12
LIN7C-202ENST00000524596 POU5F1Q01860 360 aaKnown RBP8.09□□□□□ -1.12
LIN7C-202ENST00000524596 CCDC186Q7Z3E2 898 aa8.09□□□□□ -1.12
LIN7C-202ENST00000524596 SH2D4BQ5SQS7 431 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 TRIM74Q86UV6 250 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 TRIM73Q86UV7 250 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 SLC24A3Q9HC58 644 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 NACADO15069 1562 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 ERCC5P28715 1186 aaPredicted RBP8.08□□□□□ -1.12
LIN7C-202ENST00000524596 RANBP1P43487 201 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 CCDC146Q8IYE0 955 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 CCDC112Q8NEF3 446 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 G3BP2Q9UN86 482 aaKnown RBP8.08□□□□□ -1.12
LIN7C-202ENST00000524596 LRRFIP2Q9Y608 721 aaKnown RBP8.08□□□□□ -1.12
LIN7C-202ENST00000524596 SASH1O94885 1247 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 ATP2B1P20020 1258 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 KRI1Q8N9T8 703 aaKnown RBP8.08□□□□□ -1.12
LIN7C-202ENST00000524596 MYRIPQ8NFW9 859 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.08□□□□□ -1.12
LIN7C-202ENST00000524596 HDAC9Q9UKV0 1011 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 MKL2Q9ULH7 1088 aa8.08□□□□□ -1.12
LIN7C-202ENST00000524596 PAIP2BQ9ULR5 123 aaKnown RBP8.08□□□□□ -1.12
LIN7C-202ENST00000524596 TPP2P29144 1249 aaPredicted RBP8.07□□□□□ -1.12
LIN7C-202ENST00000524596 DRC7Q8IY82 874 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 PDCD7Q8N8D1 485 aaKnown RBP8.07□□□□□ -1.12
LIN7C-202ENST00000524596 KIF18AQ8NI77 898 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 NEK1Q96PY6 1258 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 GABBR1Q9UBS5 961 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 MAGEA8P43361 318 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 PABPN1Q86U42 306 aaKnown RBP eCLIP8.07□□□□□ -1.12
LIN7C-202ENST00000524596 JADE2Q9NQC1 790 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 ITGB1BP2Q9UKP3 347 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 MMS22LQ6ZRQ5 1243 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 FMNL2Q96PY5 1086 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 ODF2LQ9ULJ1 636 aa8.07□□□□□ -1.12
LIN7C-202ENST00000524596 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.07□□□□□ -1.12
LIN7C-202ENST00000524596 BICDL2A1A5D9 508 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 E2F6O75461 281 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 SFSWAPQ12872 951 aaKnown RBP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 E2F4Q16254 413 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 MICALL1Q8N3F8 863 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 ATP6V1E2Q96A05 226 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 VTI1AQ96AJ9 217 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 SCLT1Q96NL6 688 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 SH3GL1Q99961 368 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 TMA7Q9Y2S6 64 aaKnown RBP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 TRIM17Q9Y577 477 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 IQCA1Q86XH1 822 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 IQCF2Q8IXL9 164 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 NOL7Q9UMY1 257 aaKnown RBP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 ZCCHC6Q5VYS8 1495 aaKnown RBP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 ERC2O15083 957 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 SNRNP27Q8WVK2 155 aaKnown RBP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 CDK5RAP3Q96JB5 506 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 FAM81BQ96LP2 452 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 ATG3Q9NT62 314 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 FAM184BQ9ULE4 1060 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 RPGRIP1LQ68CZ1 1315 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 SEPT6Q14141 434 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 WDR75Q8IWA0 830 aaKnown RBP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 RETREG2Q8NC44 543 aa8.06□□□□□ -1.12
LIN7C-202ENST00000524596 NOC3LQ8WTT2 800 aaKnown RBP8.06□□□□□ -1.12
LIN7C-202ENST00000524596 SAAL1Q96ER3 474 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms