RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 CICQ96RK0 1608 aaPredicted RBP27.92■■■□□ 2.06
TRAPPC9-215ENST00000524162 MTFR1LQ9H019 292 aa27.92■■■□□ 2.06
TRAPPC9-215ENST00000524162 U2AF1L5P0DN76 240 aaPredicted RBP27.91■■■□□ 2.06
TRAPPC9-215ENST00000524162 KCNQ4P56696 695 aa27.91■■■□□ 2.06
TRAPPC9-215ENST00000524162 U2AF1Q01081 240 aaKnown RBP eCLIP27.91■■■□□ 2.06
TRAPPC9-215ENST00000524162 TFCP2L1Q9NZI6 479 aa27.91■■■□□ 2.06
TRAPPC9-215ENST00000524162 RNMTO43148 476 aaKnown RBP27.9■■■□□ 2.06
TRAPPC9-215ENST00000524162 PRKAR2BP31323 418 aa27.9■■■□□ 2.06
TRAPPC9-215ENST00000524162 NFATC2IPQ8NCF5 419 aa27.9■■■□□ 2.06
TRAPPC9-215ENST00000524162 FLAD1Q8NFF5 587 aa27.9■■■□□ 2.06
TRAPPC9-215ENST00000524162 PDGFDQ9GZP0 370 aaPredicted RBP27.9■■■□□ 2.06
TRAPPC9-215ENST00000524162 SLC52A2Q9HAB3 445 aa27.9■■■□□ 2.06
TRAPPC9-215ENST00000524162 PNPLA7Q6ZV29 1317 aa27.9■■■□□ 2.06
TRAPPC9-215ENST00000524162 UBR3Q6ZT12 1888 aa27.89■■■□□ 2.06
TRAPPC9-215ENST00000524162 MAP3K5Q99683 1374 aa27.89■■■□□ 2.06
TRAPPC9-215ENST00000524162 MYBBP1AQ9BQG0 1328 aaKnown RBP27.89■■■□□ 2.05
TRAPPC9-215ENST00000524162 GNAT3A8MTJ3 354 aa27.88■■■□□ 2.05
TRAPPC9-215ENST00000524162 COL5A3P25940 1745 aaPredicted RBP27.87■■■□□ 2.05
TRAPPC9-215ENST00000524162 LGR6Q9HBX8 967 aa27.87■■■□□ 2.05
TRAPPC9-215ENST00000524162 PHACTR3Q96KR7 559 aa27.86■■■□□ 2.05
TRAPPC9-215ENST00000524162 SIPA1L3O60292 1781 aaPredicted RBP27.86■■■□□ 2.05
TRAPPC9-215ENST00000524162 ATP6V1AP38606 617 aa27.85■■■□□ 2.05
TRAPPC9-215ENST00000524162 PNNQ9H307 717 aaKnown RBP27.85■■■□□ 2.05
TRAPPC9-215ENST00000524162 PTGER2P43116 358 aa27.84■■■□□ 2.05
TRAPPC9-215ENST00000524162 CEMIPQ8WUJ3 1361 aa27.84■■■□□ 2.05
TRAPPC9-215ENST00000524162 ZBTB7AO95365 584 aa27.83■■■□□ 2.05
TRAPPC9-215ENST00000524162 SGIP1Q9BQI5 828 aa27.83■■■□□ 2.05
TRAPPC9-215ENST00000524162 UBR2Q8IWV8 1755 aa27.82■■■□□ 2.04
TRAPPC9-215ENST00000524162 HTATSF1O43719 755 aaKnown RBP27.82■■■□□ 2.04
TRAPPC9-215ENST00000524162 ITPK1Q13572 414 aa27.82■■■□□ 2.04
TRAPPC9-215ENST00000524162 PRKRIP1Q9H875 184 aaPredicted RBP27.82■■■□□ 2.04
TRAPPC9-215ENST00000524162 RC3H1Q5TC82 1133 aaKnown RBP27.81■■■□□ 2.04
TRAPPC9-215ENST00000524162 LINC00116Q8NCU8 138 aa27.81■■■□□ 2.04
TRAPPC9-215ENST00000524162 AK7Q96M32 723 aa27.81■■■□□ 2.04
TRAPPC9-215ENST00000524162 SLC4A9Q96Q91 983 aa27.81■■■□□ 2.04
TRAPPC9-215ENST00000524162 ZNF316A6NFI3 1004 aaPredicted RBP27.8■■■□□ 2.04
TRAPPC9-215ENST00000524162 SSFA2P28290 1259 aa27.8■■■□□ 2.04
TRAPPC9-215ENST00000524162 IL17REQ8NFR9 667 aa27.8■■■□□ 2.04
TRAPPC9-215ENST00000524162 MYH14Q7Z406 1995 aaKnown RBP27.79■■■□□ 2.04
TRAPPC9-215ENST00000524162 NEFMP07197 916 aa27.79■■■□□ 2.04
TRAPPC9-215ENST00000524162 CNTNAP4Q9C0A0 1308 aa27.78■■■□□ 2.04
TRAPPC9-215ENST00000524162 COL23A1Q86Y22 540 aaPredicted RBP27.78■■■□□ 2.04
TRAPPC9-215ENST00000524162 RBM42Q9BTD8 480 aaKnown RBP27.78■■■□□ 2.04
TRAPPC9-215ENST00000524162 TJP1Q07157 1748 aa27.78■■■□□ 2.04
TRAPPC9-215ENST00000524162 DLG5Q8TDM6 1919 aa27.77■■■□□ 2.04
TRAPPC9-215ENST00000524162 PLEKHF1Q96S99 279 aa27.77■■■□□ 2.04
TRAPPC9-215ENST00000524162 PPP1R1BQ9UD71 204 aaPredicted RBP27.77■■■□□ 2.04
TRAPPC9-215ENST00000524162 ATF5Q9Y2D1 282 aaPredicted RBP27.77■■■□□ 2.04
TRAPPC9-215ENST00000524162 TEFQ10587 303 aa27.76■■■□□ 2.03
TRAPPC9-215ENST00000524162 VSIG10Q8N0Z9 540 aa27.76■■■□□ 2.03
TRAPPC9-215ENST00000524162 KCPQ6ZWJ8 1503 aa27.76■■■□□ 2.03
TRAPPC9-215ENST00000524162 PTCD1O75127 700 aaKnown RBP27.74■■■□□ 2.03
TRAPPC9-215ENST00000524162 ADRA2BP18089 450 aa27.73■■■□□ 2.03
TRAPPC9-215ENST00000524162 RTF1Q92541 710 aaKnown RBP27.73■■■□□ 2.03
TRAPPC9-215ENST00000524162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.72■■■□□ 2.03
TRAPPC9-215ENST00000524162 POLD1P28340 1107 aa27.71■■■□□ 2.03
TRAPPC9-215ENST00000524162 GNPATO15228 680 aa27.7■■■□□ 2.02
TRAPPC9-215ENST00000524162 RPS6KA4O75676 772 aa27.7■■■□□ 2.02
TRAPPC9-215ENST00000524162 RTCBQ9Y3I0 505 aaKnown RBP27.7■■■□□ 2.02
TRAPPC9-215ENST00000524162 ZNF790Q6PG37 636 aa27.69■■■□□ 2.02
TRAPPC9-215ENST00000524162 AMIGO3Q86WK7 504 aa27.69■■■□□ 2.02
TRAPPC9-215ENST00000524162 ARXQ96QS3 562 aa27.69■■■□□ 2.02
TRAPPC9-215ENST00000524162 SLC39A6Q13433 755 aa27.68■■■□□ 2.02
TRAPPC9-215ENST00000524162 NFE2L2Q16236 605 aa27.68■■■□□ 2.02
TRAPPC9-215ENST00000524162 TTC5Q8N0Z6 440 aa27.68■■■□□ 2.02
TRAPPC9-215ENST00000524162 MAPK8IP3Q9UPT6 1336 aa27.67■■■□□ 2.02
TRAPPC9-215ENST00000524162 MSH5O43196 834 aa27.66■■■□□ 2.02
TRAPPC9-215ENST00000524162 TRAPPC3LQ5T215 181 aa27.66■■■□□ 2.02
TRAPPC9-215ENST00000524162 CRKLP46109 303 aaKnown RBP27.65■■■□□ 2.02
TRAPPC9-215ENST00000524162 TEX13AQ9BXU3 409 aaPredicted RBP27.65■■■□□ 2.02
TRAPPC9-215ENST00000524162 C4AP0C0L4 1744 aa27.64■■■□□ 2.01
TRAPPC9-215ENST00000524162 HEG1Q9ULI3 1381 aa27.63■■■□□ 2.01
TRAPPC9-215ENST00000524162 BTBD11A6QL63 1104 aa27.63■■■□□ 2.01
TRAPPC9-215ENST00000524162 CYP19A1P11511 503 aaPredicted RBP27.63■■■□□ 2.01
TRAPPC9-215ENST00000524162 PHF14O94880 888 aa27.62■■■□□ 2.01
TRAPPC9-215ENST00000524162 WDR43Q15061 677 aaKnown RBP eCLIP27.62■■■□□ 2.01
TRAPPC9-215ENST00000524162 INTS5Q6P9B9 1019 aaKnown RBP27.62■■■□□ 2.01
TRAPPC9-215ENST00000524162 MCM10Q7L590 875 aa27.62■■■□□ 2.01
TRAPPC9-215ENST00000524162 DNAJC10Q8IXB1 793 aa27.62■■■□□ 2.01
TRAPPC9-215ENST00000524162 ZNF496Q96IT1 587 aaPredicted RBP27.62■■■□□ 2.01
TRAPPC9-215ENST00000524162 FMNL2Q96PY5 1086 aa27.61■■■□□ 2.01
TRAPPC9-215ENST00000524162 SYT17Q9BSW7 474 aa27.61■■■□□ 2.01
TRAPPC9-215ENST00000524162 FHDC1Q9C0D6 1143 aaPredicted RBP27.61■■■□□ 2.01
TRAPPC9-215ENST00000524162 CCDC87Q9NVE4 849 aa27.61■■■□□ 2.01
TRAPPC9-215ENST00000524162 TAF7Q15545 349 aaPredicted RBP27.6■■■□□ 2.01
TRAPPC9-215ENST00000524162 STARD3NLO95772 234 aa27.59■■■□□ 2.01
TRAPPC9-215ENST00000524162 PNISRQ8TF01 805 aaKnown RBP27.59■■■□□ 2.01
TRAPPC9-215ENST00000524162 ARHGEF1Q92888 912 aaKnown RBP27.59■■■□□ 2.01
TRAPPC9-215ENST00000524162 NLGN1Q8N2Q7 840 aa27.58■■■□□ 2.01
TRAPPC9-215ENST00000524162 KDM3BQ7LBC6 1761 aa27.58■■■□□ 2
TRAPPC9-215ENST00000524162 RFC4P35249 363 aa27.57■■■□□ 2
TRAPPC9-215ENST00000524162 LMOD3Q0VAK6 560 aa27.57■■■□□ 2
TRAPPC9-215ENST00000524162 DCTN1Q14203 1278 aa27.57■■■□□ 2
TRAPPC9-215ENST00000524162 RUNDC1Q96C34 613 aa27.57■■■□□ 2
TRAPPC9-215ENST00000524162 TMPOP42166 694 aaKnown RBP27.56■■■□□ 2
TRAPPC9-215ENST00000524162 SOS1Q07889 1333 aaPredicted RBP27.56■■■□□ 2
TRAPPC9-215ENST00000524162 SMIM5Q71RC9 77 aa27.55■■■□□ 2
TRAPPC9-215ENST00000524162 ADAMTS8Q9UP79 889 aa27.55■■■□□ 2
TRAPPC9-215ENST00000524162 MSL1Q68DK7 614 aa27.54■■■□□ 2
TRAPPC9-215ENST00000524162 BABAM1Q9NWV8 329 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms