RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 PTGIRP43119 386 aa6.91□□□□□ -1.3
SKP1-212ENST00000523966 SCNN1DP51172 638 aa6.91□□□□□ -1.3
SKP1-212ENST00000523966 RELBQ01201 579 aa6.91□□□□□ -1.3
SKP1-212ENST00000523966 Q6ZVU0 165 aa6.91□□□□□ -1.3
SKP1-212ENST00000523966 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
SKP1-212ENST00000523966 XAGE2Q96GT9 111 aa6.91□□□□□ -1.3
SKP1-212ENST00000523966 ZFAND3Q9H8U3 227 aa6.91□□□□□ -1.3
SKP1-212ENST00000523966 IVNS1ABPQ9Y6Y0 642 aa6.91□□□□□ -1.3
SKP1-212ENST00000523966 A0A1W2PRU2 124 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 A6NJY4 79 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 CAPN5O15484 640 aaPredicted RBP6.9□□□□□ -1.3
SKP1-212ENST00000523966 LGR5O75473 907 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 STAU1O95793 577 aaKnown RBP6.9□□□□□ -1.3
SKP1-212ENST00000523966 SMTNP53814 917 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 TLR1Q15399 786 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 TNS4Q8IZW8 715 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 GAS2L2Q8NHY3 880 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 CHMP7Q8WUX9 453 aaPredicted RBP6.9□□□□□ -1.3
SKP1-212ENST00000523966 SCG3Q8WXD2 468 aaKnown RBP6.9□□□□□ -1.3
SKP1-212ENST00000523966 HPS1Q92902 700 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 AGBL1Q96MI9 1066 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 SLC4A9Q96Q91 983 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 ESYT1Q9BSJ8 1104 aa6.9□□□□□ -1.3
SKP1-212ENST00000523966 TSEN34Q9BSV6 310 aaKnown RBP6.9□□□□□ -1.3
SKP1-212ENST00000523966 CXXC1Q9P0U4 656 aaPredicted RBP6.9□□□□□ -1.3
SKP1-212ENST00000523966 FAM187AA6NFU0 413 aa6.89□□□□□ -1.31
SKP1-212ENST00000523966 PTCD1O75127 700 aaKnown RBP6.89□□□□□ -1.31
SKP1-212ENST00000523966 IGFBP4P22692 258 aa6.89□□□□□ -1.31
SKP1-212ENST00000523966 CLN3Q13286 438 aa6.89□□□□□ -1.31
SKP1-212ENST00000523966 TRIM67Q6ZTA4 783 aa6.89□□□□□ -1.31
SKP1-212ENST00000523966 NBPF15Q8N660 670 aa6.89□□□□□ -1.31
SKP1-212ENST00000523966 KLF16Q9BXK1 252 aaPredicted RBP6.89□□□□□ -1.31
SKP1-212ENST00000523966 CCDC9Q9Y3X0 531 aaKnown RBP6.89□□□□□ -1.31
SKP1-212ENST00000523966 ATAD2Q6PL18 1390 aa6.89□□□□□ -1.31
SKP1-212ENST00000523966 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
SKP1-212ENST00000523966 SLC27A3Q5K4L6 730 aa6.88□□□□□ -1.31
SKP1-212ENST00000523966 TMCO4Q5TGY1 634 aa6.88□□□□□ -1.31
SKP1-212ENST00000523966 C1orf216Q8TAB5 229 aa6.88□□□□□ -1.31
SKP1-212ENST00000523966 ZNF395Q9H8N7 513 aaPredicted RBP6.88□□□□□ -1.31
SKP1-212ENST00000523966 CDK2AP1O14519 115 aa6.87□□□□□ -1.31
SKP1-212ENST00000523966 FOXO3O43524 673 aa6.87□□□□□ -1.31
SKP1-212ENST00000523966 IL2RAP01589 272 aa6.87□□□□□ -1.31
SKP1-212ENST00000523966 WEE1P30291 646 aa6.87□□□□□ -1.31
SKP1-212ENST00000523966 CENPCQ03188 943 aa6.87□□□□□ -1.31
SKP1-212ENST00000523966 PKDCCQ504Y2 493 aa6.87□□□□□ -1.31
SKP1-212ENST00000523966 TMEM214Q6NUQ4 689 aaKnown RBP6.87□□□□□ -1.31
SKP1-212ENST00000523966 MEIOBQ8N635 442 aa6.87□□□□□ -1.31
SKP1-212ENST00000523966 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
SKP1-212ENST00000523966 POLMQ9NP87 494 aaPredicted RBP6.87□□□□□ -1.31
SKP1-212ENST00000523966 GNEQ9Y223 722 aaKnown RBP6.87□□□□□ -1.31
SKP1-212ENST00000523966 ABL1P00519 1130 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 BMP2P12643 396 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 SCARF1Q14162 830 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 OCLNQ16625 522 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 GNASQ5JWF2 1037 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 PHLDB3Q6NSJ2 640 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 SLC9A9Q8IVB4 645 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 MKNK1Q9BUB5 465 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 TSPAN10Q9H1Z9 355 aaPredicted RBP6.86□□□□□ -1.31
SKP1-212ENST00000523966 CABP1Q9NZU7 370 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 SCHIP1Q9P0W5 487 aaPredicted RBP6.86□□□□□ -1.31
SKP1-212ENST00000523966 SLAIN2Q9P270 581 aa6.86□□□□□ -1.31
SKP1-212ENST00000523966 GFRA3O60609 400 aa6.85□□□□□ -1.31
SKP1-212ENST00000523966 GPC1P35052 558 aa6.85□□□□□ -1.31
SKP1-212ENST00000523966 PSMA6P60900 246 aaKnown RBP6.85□□□□□ -1.31
SKP1-212ENST00000523966 TBCELQ5QJ74 424 aa6.85□□□□□ -1.31
SKP1-212ENST00000523966 TAS1R3Q7RTX0 852 aa6.85□□□□□ -1.31
SKP1-212ENST00000523966 TXNDC2Q86VQ3 553 aa6.85□□□□□ -1.31
SKP1-212ENST00000523966 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
SKP1-212ENST00000523966 ZNF232Q9UNY5 417 aa6.85□□□□□ -1.31
SKP1-212ENST00000523966 DGAT1O75907 488 aa6.84□□□□□ -1.31
SKP1-212ENST00000523966 FKBP5Q13451 457 aaPredicted RBP6.84□□□□□ -1.31
SKP1-212ENST00000523966 MTFR1Q15390 333 aa6.84□□□□□ -1.31
SKP1-212ENST00000523966 C6orf118Q5T5N4 469 aa6.84□□□□□ -1.31
SKP1-212ENST00000523966 SERTM1A2A2V5 107 aa6.83□□□□□ -1.32
SKP1-212ENST00000523966 NRG2O14511 850 aaPredicted RBP6.83□□□□□ -1.32
SKP1-212ENST00000523966 EPHA4P54764 986 aa6.83□□□□□ -1.32
SKP1-212ENST00000523966 LAPTM4AQ15012 233 aa6.83□□□□□ -1.32
SKP1-212ENST00000523966 CTC1Q2NKJ3 1217 aa6.83□□□□□ -1.32
SKP1-212ENST00000523966 KDF1Q8NAX2 398 aaPredicted RBP6.83□□□□□ -1.32
SKP1-212ENST00000523966 COL26A1Q96A83 441 aa6.83□□□□□ -1.32
SKP1-212ENST00000523966 INSM2Q96T92 566 aaPredicted RBP6.83□□□□□ -1.32
SKP1-212ENST00000523966 NIFKQ9BYG3 293 aaKnown RBP6.83□□□□□ -1.32
SKP1-212ENST00000523966 BIN2Q9UBW5 565 aaPredicted RBP6.83□□□□□ -1.32
SKP1-212ENST00000523966 SPINT1O43278 529 aa6.82□□□□□ -1.32
SKP1-212ENST00000523966 RNF144AP50876 292 aaPredicted RBP6.82□□□□□ -1.32
SKP1-212ENST00000523966 FOXK2Q01167 660 aa6.82□□□□□ -1.32
SKP1-212ENST00000523966 NAA30Q147X3 362 aaPredicted RBP6.82□□□□□ -1.32
SKP1-212ENST00000523966 MRPL14Q6P1L8 145 aaKnown RBP6.82□□□□□ -1.32
SKP1-212ENST00000523966 PPARGC1BQ86YN6 1023 aaKnown RBP6.82□□□□□ -1.32
SKP1-212ENST00000523966 STAG2Q8N3U4 1231 aa6.82□□□□□ -1.32
SKP1-212ENST00000523966 RHBDD1Q8TEB9 315 aa6.82□□□□□ -1.32
SKP1-212ENST00000523966 HRH3Q9Y5N1 445 aa6.82□□□□□ -1.32
SKP1-212ENST00000523966 AXIN1O15169 862 aa6.81□□□□□ -1.32
SKP1-212ENST00000523966 NOS2P35228 1153 aa6.81□□□□□ -1.32
SKP1-212ENST00000523966 SERPINB4P48594 390 aa6.81□□□□□ -1.32
SKP1-212ENST00000523966 TEAD4Q15561 434 aa6.81□□□□□ -1.32
SKP1-212ENST00000523966 CCDC27Q2M243 656 aa6.81□□□□□ -1.32
SKP1-212ENST00000523966 SND1Q7KZF4 910 aaKnown RBP eCLIP6.81□□□□□ -1.322e-12■■□□□ 11.8
SKP1-212ENST00000523966 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms