RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 TRAPPC3LQ5T215 181 aa11.04□□□□□ -0.64
NSMCE2-213ENST00000523824 IFNL2Q8IZJ0 200 aa11.04□□□□□ -0.64
NSMCE2-213ENST00000523824 A0A0G2JLW4 131 aa11.03□□□□□ -0.64
NSMCE2-213ENST00000523824 TOMM70O94826 608 aa11.03□□□□□ -0.64
NSMCE2-213ENST00000523824 ARHGAP27Q6ZUM4 889 aa11.03□□□□□ -0.64
NSMCE2-213ENST00000523824 NLGN1Q8N2Q7 840 aa11.03□□□□□ -0.64
NSMCE2-213ENST00000523824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.03□□□□□ -0.643e-10■■■■■ 39.1
NSMCE2-213ENST00000523824 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
NSMCE2-213ENST00000523824 TOGARAM1Q9Y4F4 1720 aa11.02□□□□□ -0.65
NSMCE2-213ENST00000523824 PHKG2P15735 406 aa11.02□□□□□ -0.65
NSMCE2-213ENST00000523824 EYA1Q99502 592 aa11.02□□□□□ -0.65
NSMCE2-213ENST00000523824 CARD14Q9BXL6 1004 aa11.02□□□□□ -0.65
NSMCE2-213ENST00000523824 ATG3Q9NT62 314 aa11.02□□□□□ -0.65
NSMCE2-213ENST00000523824 CCDC87Q9NVE4 849 aa11.02□□□□□ -0.65
NSMCE2-213ENST00000523824 ITGB4P16144 1822 aa11.02□□□□□ -0.65
NSMCE2-213ENST00000523824 UBR3Q6ZT12 1888 aa11.02□□□□□ -0.65
NSMCE2-213ENST00000523824 FCHSD2O94868 740 aa11.01□□□□□ -0.65
NSMCE2-213ENST00000523824 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
NSMCE2-213ENST00000523824 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
NSMCE2-213ENST00000523824 PARP3Q9Y6F1 533 aa11.01□□□□□ -0.65
NSMCE2-213ENST00000523824 WASHC2AQ641Q2 1341 aa11.01□□□□□ -0.65
NSMCE2-213ENST00000523824 DPEP1P16444 411 aa11□□□□□ -0.65
NSMCE2-213ENST00000523824 RFC4P35249 363 aa11□□□□□ -0.65
NSMCE2-213ENST00000523824 DNAJC5GQ8N7S2 189 aa11□□□□□ -0.65
NSMCE2-213ENST00000523824 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
NSMCE2-213ENST00000523824 PXDNLA1KZ92 1463 aa11□□□□□ -0.65
NSMCE2-213ENST00000523824 PKD1L3Q7Z443 1732 aa10.99□□□□□ -0.65
NSMCE2-213ENST00000523824 RC3H1Q5TC82 1133 aaKnown RBP10.99□□□□□ -0.65
NSMCE2-213ENST00000523824 NMRK2Q9NPI5 230 aa10.99□□□□□ -0.65
NSMCE2-213ENST00000523824 NCAPD2Q15021 1401 aa10.99□□□□□ -0.65
NSMCE2-213ENST00000523824 MAP2P11137 1827 aaKnown RBP10.98□□□□□ -0.65
NSMCE2-213ENST00000523824 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
NSMCE2-213ENST00000523824 ERVV-2B6SEH9 535 aa10.98□□□□□ -0.65
NSMCE2-213ENST00000523824 RPS6KA4O75676 772 aa10.98□□□□□ -0.65
NSMCE2-213ENST00000523824 GYS1P13807 737 aa10.98□□□□□ -0.65
NSMCE2-213ENST00000523824 C9orf131Q5VYM1 1079 aa10.98□□□□□ -0.65
NSMCE2-213ENST00000523824 POLKQ9UBT6 870 aa10.98□□□□□ -0.65
NSMCE2-213ENST00000523824 CICQ96RK0 1608 aaPredicted RBP10.98□□□□□ -0.65
NSMCE2-213ENST00000523824 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
NSMCE2-213ENST00000523824 RBM46Q8TBY0 533 aaKnown RBP10.97□□□□□ -0.65
NSMCE2-213ENST00000523824 SLC4A9Q96Q91 983 aa10.97□□□□□ -0.65
NSMCE2-213ENST00000523824 RNF39Q9H2S5 420 aa10.97□□□□□ -0.65
NSMCE2-213ENST00000523824 PIM2Q9P1W9 311 aa10.97□□□□□ -0.65
NSMCE2-213ENST00000523824 C10orf71Q711Q0 1435 aa10.97□□□□□ -0.65
NSMCE2-213ENST00000523824 CNTNAP4Q9C0A0 1308 aa10.96□□□□□ -0.65
NSMCE2-213ENST00000523824 TNNT2P45379 298 aaPredicted RBP10.96□□□□□ -0.65
NSMCE2-213ENST00000523824 CABP4P57796 275 aa10.96□□□□□ -0.65
NSMCE2-213ENST00000523824 EIF4A2Q14240 407 aaKnown RBP10.96□□□□□ -0.65
NSMCE2-213ENST00000523824 PLEKHO1Q53GL0 409 aaPredicted RBP10.96□□□□□ -0.65
NSMCE2-213ENST00000523824 DCAF5Q96JK2 942 aa10.96□□□□□ -0.65
NSMCE2-213ENST00000523824 KDRP35968 1356 aa10.95□□□□□ -0.66
NSMCE2-213ENST00000523824 KDM2BQ8NHM5 1336 aa10.95□□□□□ -0.66
NSMCE2-213ENST00000523824 KCNA3P22001 575 aa10.95□□□□□ -0.66
NSMCE2-213ENST00000523824 CACNB1Q02641 598 aaPredicted RBP10.95□□□□□ -0.66
NSMCE2-213ENST00000523824 FSTL1Q12841 308 aa10.95□□□□□ -0.66
NSMCE2-213ENST00000523824 DALRD3Q5D0E6 543 aaKnown RBP10.95□□□□□ -0.66
NSMCE2-213ENST00000523824 KLRG1Q96E93 195 aa10.95□□□□□ -0.66
NSMCE2-213ENST00000523824 N4BP2Q86UW6 1770 aaPredicted RBP10.95□□□□□ -0.66
NSMCE2-213ENST00000523824 PLEKHG2Q9H7P9 1386 aa10.94□□□□□ -0.66
NSMCE2-213ENST00000523824 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
NSMCE2-213ENST00000523824 HTRA3P83110 453 aa10.94□□□□□ -0.66
NSMCE2-213ENST00000523824 POLR3GLQ9BT43 218 aa10.94□□□□□ -0.66
NSMCE2-213ENST00000523824 RRAGCQ9HB90 399 aa10.94□□□□□ -0.66
NSMCE2-213ENST00000523824 RNF181Q9P0P0 153 aa10.94□□□□□ -0.66
NSMCE2-213ENST00000523824 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
NSMCE2-213ENST00000523824 MTHFSP49914 203 aa10.93□□□□□ -0.66
NSMCE2-213ENST00000523824 AMOTQ4VCS5 1084 aa10.93□□□□□ -0.66
NSMCE2-213ENST00000523824 ZNF530Q6P9A1 599 aaPredicted RBP10.93□□□□□ -0.66
NSMCE2-213ENST00000523824 SRP68Q9UHB9 627 aaKnown RBP10.93□□□□□ -0.66
NSMCE2-213ENST00000523824 C4AP0C0L4 1744 aa10.92□□□□□ -0.66
NSMCE2-213ENST00000523824 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
NSMCE2-213ENST00000523824 CRKLP46109 303 aaKnown RBP10.92□□□□□ -0.66
NSMCE2-213ENST00000523824 FKBP8Q14318 412 aa10.92□□□□□ -0.66
NSMCE2-213ENST00000523824 C1orf141Q5JVX7 400 aa10.92□□□□□ -0.66
NSMCE2-213ENST00000523824 KCPQ6ZWJ8 1503 aa10.91□□□□□ -0.66
NSMCE2-213ENST00000523824 CHRNA5P30532 468 aa10.91□□□□□ -0.66
NSMCE2-213ENST00000523824 COL13A1Q5TAT6 717 aaPredicted RBP10.91□□□□□ -0.66
NSMCE2-213ENST00000523824 JMYQ8N9B5 988 aa10.91□□□□□ -0.66
NSMCE2-213ENST00000523824 NFATC2IPQ8NCF5 419 aa10.91□□□□□ -0.66
NSMCE2-213ENST00000523824 USP42Q9H9J4 1324 aaKnown RBP10.9□□□□□ -0.66
NSMCE2-213ENST00000523824 ANKRD26Q9UPS8 1709 aa10.9□□□□□ -0.66
NSMCE2-213ENST00000523824 ZPR1O75312 459 aa10.9□□□□□ -0.66
NSMCE2-213ENST00000523824 CAPN15O75808 1086 aa10.9□□□□□ -0.66
NSMCE2-213ENST00000523824 DDR1Q08345 913 aa10.9□□□□□ -0.66
NSMCE2-213ENST00000523824 SMC1BQ8NDV3 1235 aa10.9□□□□□ -0.66
NSMCE2-213ENST00000523824 WDR90Q96KV7 1748 aa10.89□□□□□ -0.67
NSMCE2-213ENST00000523824 TM4SF1P30408 202 aa10.89□□□□□ -0.67
NSMCE2-213ENST00000523824 KDM6AO15550 1401 aaPredicted RBP10.89□□□□□ -0.67
NSMCE2-213ENST00000523824 ZNF831Q5JPB2 1677 aa10.89□□□□□ -0.67
NSMCE2-213ENST00000523824 POLRMTO00411 1230 aaKnown RBP10.88□□□□□ -0.67
NSMCE2-213ENST00000523824 INTS5Q6P9B9 1019 aaKnown RBP10.88□□□□□ -0.67
NSMCE2-213ENST00000523824 TNS4Q8IZW8 715 aa10.88□□□□□ -0.67
NSMCE2-213ENST00000523824 COL5A3P25940 1745 aaPredicted RBP10.87□□□□□ -0.67
NSMCE2-213ENST00000523824 USPL1Q5W0Q7 1092 aa10.87□□□□□ -0.67
NSMCE2-213ENST00000523824 SULT6B1Q6IMI4 303 aa10.87□□□□□ -0.67
NSMCE2-213ENST00000523824 AEBP1Q8IUX7 1158 aa10.87□□□□□ -0.67
NSMCE2-213ENST00000523824 ZC3H4Q9UPT8 1303 aaKnown RBP10.86□□□□□ -0.67
NSMCE2-213ENST00000523824 ARFGEF1Q9Y6D6 1849 aa10.86□□□□□ -0.67
NSMCE2-213ENST00000523824 VEGFAP15692 232 aaPredicted RBP10.86□□□□□ -0.67
NSMCE2-213ENST00000523824 LMNB1P20700 586 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms