RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 IRF5Q13568 498 aa9.29□□□□□ -0.92
NSMCE2-211ENST00000523549 UBAP2LQ14157 1087 aaKnown RBP9.29□□□□□ -0.92
NSMCE2-211ENST00000523549 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
NSMCE2-211ENST00000523549 MYCP01106 439 aaPredicted RBP9.28□□□□□ -0.92
NSMCE2-211ENST00000523549 GPAT2Q6NUI2 795 aa9.28□□□□□ -0.92
NSMCE2-211ENST00000523549 ZSCAN10Q96SZ4 725 aaPredicted RBP9.28□□□□□ -0.92
NSMCE2-211ENST00000523549 TBC1D2BQ9UPU7 963 aa9.28□□□□□ -0.92
NSMCE2-211ENST00000523549 BEND7Q8N7W2 519 aaPredicted RBP9.27□□□□□ -0.93
NSMCE2-211ENST00000523549 A0A1B0GTH6 734 aa9.26□□□□□ -0.93
NSMCE2-211ENST00000523549 OIP5O43482 229 aa9.26□□□□□ -0.93
NSMCE2-211ENST00000523549 PHKA2P46019 1235 aa9.26□□□□□ -0.93
NSMCE2-211ENST00000523549 USP4Q13107 963 aa9.26□□□□□ -0.93
NSMCE2-211ENST00000523549 PHF20L1A8MW92 1017 aa9.25□□□□□ -0.93
NSMCE2-211ENST00000523549 ITGB2P05107 769 aa9.25□□□□□ -0.93
NSMCE2-211ENST00000523549 EIF4G2P78344 907 aaKnown RBP eCLIP9.25□□□□□ -0.93
NSMCE2-211ENST00000523549 C4orf17Q53FE4 359 aa9.25□□□□□ -0.93
NSMCE2-211ENST00000523549 DCAF5Q96JK2 942 aa9.25□□□□□ -0.93
NSMCE2-211ENST00000523549 NSFL1CQ9UNZ2 370 aaKnown RBP9.25□□□□□ -0.93
NSMCE2-211ENST00000523549 MAP2K3P46734 347 aa9.24□□□□□ -0.93
NSMCE2-211ENST00000523549 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
NSMCE2-211ENST00000523549 ESCO1Q5FWF5 840 aa9.24□□□□□ -0.93
NSMCE2-211ENST00000523549 NEDD1Q8NHV4 660 aa9.24□□□□□ -0.93
NSMCE2-211ENST00000523549 GPAMQ9HCL2 828 aa9.24□□□□□ -0.93
NSMCE2-211ENST00000523549 PPARGC1BQ86YN6 1023 aaKnown RBP9.23□□□□□ -0.93
NSMCE2-211ENST00000523549 KLRG1Q96E93 195 aa9.23□□□□□ -0.93
NSMCE2-211ENST00000523549 OXCT2Q9BYC2 517 aaPredicted RBP9.23□□□□□ -0.93
NSMCE2-211ENST00000523549 ETNK1Q9HBU6 452 aa9.23□□□□□ -0.93
NSMCE2-211ENST00000523549 STAU1O95793 577 aaKnown RBP9.22□□□□□ -0.93
NSMCE2-211ENST00000523549 MSX1P28360 303 aa9.22□□□□□ -0.93
NSMCE2-211ENST00000523549 PLA2G4EQ3MJ16 856 aa9.22□□□□□ -0.93
NSMCE2-211ENST00000523549 GNASQ5JWF2 1037 aa9.22□□□□□ -0.93
NSMCE2-211ENST00000523549 C1orf229Q6ZS94 237 aaPredicted RBP9.22□□□□□ -0.93
NSMCE2-211ENST00000523549 DOLKQ9UPQ8 538 aa9.22□□□□□ -0.93
NSMCE2-211ENST00000523549 TMEM214Q6NUQ4 689 aaKnown RBP9.21□□□□□ -0.94
NSMCE2-211ENST00000523549 NDFIP2Q9NV92 336 aa9.21□□□□□ -0.94
NSMCE2-211ENST00000523549 SLFNL1Q499Z3 407 aa9.2□□□□□ -0.94
NSMCE2-211ENST00000523549 RHBDD1Q8TEB9 315 aa9.2□□□□□ -0.94
NSMCE2-211ENST00000523549 RUBCNLQ9H714 662 aa9.2□□□□□ -0.94
NSMCE2-211ENST00000523549 PRM3Q9NNZ6 103 aa9.2□□□□□ -0.94
NSMCE2-211ENST00000523549 PHF24Q9UPV7 400 aa9.2□□□□□ -0.94
NSMCE2-211ENST00000523549 SHISA8B8ZZ34 492 aa9.19□□□□□ -0.94
NSMCE2-211ENST00000523549 C2CD2LO14523 706 aa9.19□□□□□ -0.94
NSMCE2-211ENST00000523549 SCNN1DP51172 638 aa9.19□□□□□ -0.94
NSMCE2-211ENST00000523549 SNRPNP63162 240 aaKnown RBP9.19□□□□□ -0.94
NSMCE2-211ENST00000523549 RNF135Q8IUD6 432 aa9.19□□□□□ -0.94
NSMCE2-211ENST00000523549 CRISPLD1Q9H336 500 aa9.19□□□□□ -0.94
NSMCE2-211ENST00000523549 GTF2E1P29083 439 aaPredicted RBP9.18□□□□□ -0.94
NSMCE2-211ENST00000523549 VAC14Q08AM6 782 aa9.18□□□□□ -0.94
NSMCE2-211ENST00000523549 PODNQ7Z5L7 613 aa9.18□□□□□ -0.94
NSMCE2-211ENST00000523549 GALNT6Q8NCL4 622 aa9.18□□□□□ -0.94
NSMCE2-211ENST00000523549 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
NSMCE2-211ENST00000523549 ATXN7L1Q9ULK2 861 aaPredicted RBP9.18□□□□□ -0.94
NSMCE2-211ENST00000523549 BNIP3LO60238 219 aa9.17□□□□□ -0.94
NSMCE2-211ENST00000523549 INHAP05111 366 aa9.17□□□□□ -0.94
NSMCE2-211ENST00000523549 CSB-PGBD3P0DP91 1061 aa9.17□□□□□ -0.94
NSMCE2-211ENST00000523549 PGBD3Q8N328 593 aa9.17□□□□□ -0.94
NSMCE2-211ENST00000523549 GDF2Q9UK05 429 aaPredicted RBP9.17□□□□□ -0.94
NSMCE2-211ENST00000523549 HOXB4P17483 251 aaPredicted RBP9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 TLR1Q15399 786 aa9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 MAP7D1Q3KQU3 841 aa9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 TPRNQ4KMQ1 711 aa9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 OXLD1Q5BKU9 147 aa9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 EFHC2Q5JST6 749 aa9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 EDARADDQ8WWZ3 215 aa9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 SPOCK3Q9BQ16 436 aa9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
NSMCE2-211ENST00000523549 MSTNO14793 375 aa9.15□□□□□ -0.94
NSMCE2-211ENST00000523549 PROCP04070 461 aa9.15□□□□□ -0.94
NSMCE2-211ENST00000523549 CTBSQ01459 385 aa9.15□□□□□ -0.94
NSMCE2-211ENST00000523549 ZNF295-AS1Q8N0V1 137 aa9.15□□□□□ -0.94
NSMCE2-211ENST00000523549 ABHD17AQ96GS6 310 aa9.15□□□□□ -0.94
NSMCE2-211ENST00000523549 GDF10P55107 478 aa9.14□□□□□ -0.95
NSMCE2-211ENST00000523549 GOLGA6L1Q8N7Z2 621 aa9.14□□□□□ -0.95
NSMCE2-211ENST00000523549 FGFR3P22607 806 aa9.13□□□□□ -0.95
NSMCE2-211ENST00000523549 SMTNP53814 917 aa9.13□□□□□ -0.95
NSMCE2-211ENST00000523549 WASHC4Q2M389 1173 aa9.13□□□□□ -0.95
NSMCE2-211ENST00000523549 LINC00114Q6XXX2 140 aa9.13□□□□□ -0.95
NSMCE2-211ENST00000523549 PLPP7Q8NBV4 271 aa9.13□□□□□ -0.95
NSMCE2-211ENST00000523549 SLC4A9Q96Q91 983 aa9.13□□□□□ -0.95
NSMCE2-211ENST00000523549 HCN2Q9UL51 889 aa9.13□□□□□ -0.95
NSMCE2-211ENST00000523549 ATP4AP20648 1035 aa9.12□□□□□ -0.95
NSMCE2-211ENST00000523549 C1orf216Q8TAB5 229 aa9.12□□□□□ -0.95
NSMCE2-211ENST00000523549 ZCCHC2Q9C0B9 1178 aaKnown RBP9.12□□□□□ -0.95
NSMCE2-211ENST00000523549 MKL2Q9ULH7 1088 aa9.12□□□□□ -0.95
NSMCE2-211ENST00000523549 KRBA1A5PL33 1030 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 TMEM229AB2RXF0 380 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 BMP4P12644 408 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 COL8A1P27658 744 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 ABL2P42684 1182 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 PLA2G4AP47712 749 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 TBC1D9Q6ZT07 1266 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 NLRP8Q86W28 1048 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 NIFKQ9BYG3 293 aaKnown RBP9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 GGA1Q9UJY5 639 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 IQSEC3Q9UPP2 1182 aaPredicted RBP9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 PCDHGC4Q9Y5F7 938 aa9.11□□□□□ -0.95
NSMCE2-211ENST00000523549 ADAM23O75077 832 aa9.1□□□□□ -0.95
NSMCE2-211ENST00000523549 SOX11P35716 441 aa9.1□□□□□ -0.95
NSMCE2-211ENST00000523549 MTFR1Q15390 333 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms