RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 CCNL1Q9UK58 526 aaPredicted RBP15.68■□□□□ 0.1
PVT1-215ENST00000522963 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
PVT1-215ENST00000522963 PALLDQ8WX93 1383 aa15.67■□□□□ 0.1
PVT1-215ENST00000522963 ERVV-2B6SEH9 535 aa15.67■□□□□ 0.1
PVT1-215ENST00000522963 SMARCC1Q92922 1105 aaPredicted RBP15.67■□□□□ 0.1
PVT1-215ENST00000522963 YTHDC1Q96MU7 727 aaKnown RBP15.67■□□□□ 0.1
PVT1-215ENST00000522963 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
PVT1-215ENST00000522963 LRRC4BQ9NT99 713 aa15.67■□□□□ 0.1
PVT1-215ENST00000522963 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
PVT1-215ENST00000522963 TRIM35Q9UPQ4 493 aa15.67■□□□□ 0.1
PVT1-215ENST00000522963 VIRMAQ69YN4 1812 aaKnown RBP15.66■□□□□ 0.1
PVT1-215ENST00000522963 MAP3K5Q99683 1374 aa15.66■□□□□ 0.1
PVT1-215ENST00000522963 GNAT3A8MTJ3 354 aa15.66■□□□□ 0.1
PVT1-215ENST00000522963 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
PVT1-215ENST00000522963 SLC27A3Q5K4L6 730 aa15.66■□□□□ 0.1
PVT1-215ENST00000522963 LY75O60449 1722 aa15.65■□□□□ 0.1
PVT1-215ENST00000522963 SCN11AQ9UI33 1791 aa15.65■□□□□ 0.1
PVT1-215ENST00000522963 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
PVT1-215ENST00000522963 DCTN1Q14203 1278 aa15.65■□□□□ 0.1
PVT1-215ENST00000522963 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
PVT1-215ENST00000522963 NFATC2IPQ8NCF5 419 aa15.65■□□□□ 0.1
PVT1-215ENST00000522963 HTATSF1O43719 755 aaKnown RBP15.64■□□□□ 0.09
PVT1-215ENST00000522963 LMOD3Q0VAK6 560 aa15.64■□□□□ 0.09
PVT1-215ENST00000522963 MCM10Q7L590 875 aa15.64■□□□□ 0.09
PVT1-215ENST00000522963 NGEFQ8N5V2 710 aa15.64■□□□□ 0.09
PVT1-215ENST00000522963 IL17REQ8NFR9 667 aa15.64■□□□□ 0.09
PVT1-215ENST00000522963 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
PVT1-215ENST00000522963 ATG3Q9NT62 314 aa15.64■□□□□ 0.09
PVT1-215ENST00000522963 SLC15A2Q16348 729 aa15.63■□□□□ 0.09
PVT1-215ENST00000522963 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
PVT1-215ENST00000522963 RTF1Q92541 710 aaKnown RBP15.63■□□□□ 0.09
PVT1-215ENST00000522963 THUMPD2Q9BTF0 503 aaKnown RBP15.63■□□□□ 0.09
PVT1-215ENST00000522963 ZNF827Q17R98 1081 aa15.62■□□□□ 0.09
PVT1-215ENST00000522963 ZNF521Q96K83 1311 aa15.62■□□□□ 0.09
PVT1-215ENST00000522963 LOC102724428A0A0B4J2F2 783 aa15.61■□□□□ 0.09
PVT1-215ENST00000522963 ATP6V1AP38606 617 aa15.61■□□□□ 0.09
PVT1-215ENST00000522963 SIK1P57059 783 aa15.61■□□□□ 0.09
PVT1-215ENST00000522963 SLC52A2Q9HAB3 445 aa15.61■□□□□ 0.09
PVT1-215ENST00000522963 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
PVT1-215ENST00000522963 CEMIPQ8WUJ3 1361 aa15.61■□□□□ 0.09
PVT1-215ENST00000522963 PTCD1O75127 700 aaKnown RBP15.6■□□□□ 0.09
PVT1-215ENST00000522963 TEFQ10587 303 aa15.6■□□□□ 0.09
PVT1-215ENST00000522963 PDGFDQ9GZP0 370 aaPredicted RBP15.6■□□□□ 0.09
PVT1-215ENST00000522963 ZBED9Q6R2W3 1325 aa15.6■□□□□ 0.09
PVT1-215ENST00000522963 PAPPAQ13219 1627 aa15.59■□□□□ 0.09
PVT1-215ENST00000522963 MSH5O43196 834 aa15.59■□□□□ 0.09
PVT1-215ENST00000522963 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
PVT1-215ENST00000522963 C5P01031 1676 aa15.58■□□□□ 0.08
PVT1-215ENST00000522963 WDR63Q8IWG1 891 aa15.58■□□□□ 0.08
PVT1-215ENST00000522963 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
PVT1-215ENST00000522963 TAF1LQ8IZX4 1826 aa15.58■□□□□ 0.08
PVT1-215ENST00000522963 DLG5Q8TDM6 1919 aa15.57■□□□□ 0.08
PVT1-215ENST00000522963 ZBTB7AO95365 584 aa15.57■□□□□ 0.08
PVT1-215ENST00000522963 ITPK1Q13572 414 aa15.57■□□□□ 0.08
PVT1-215ENST00000522963 AK7Q96M32 723 aa15.57■□□□□ 0.08
PVT1-215ENST00000522963 CALD1Q05682 793 aaKnown RBP15.56■□□□□ 0.08
PVT1-215ENST00000522963 LINC00116Q8NCU8 138 aa15.56■□□□□ 0.08
PVT1-215ENST00000522963 SPINK5Q9NQ38 1064 aaPredicted RBP15.56■□□□□ 0.08
PVT1-215ENST00000522963 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
PVT1-215ENST00000522963 ADAMTS7Q9UKP4 1686 aa15.56■□□□□ 0.08
PVT1-215ENST00000522963 TUBGCP6Q96RT7 1819 aa15.55■□□□□ 0.08
PVT1-215ENST00000522963 IL16Q14005 1332 aa15.55■□□□□ 0.08
PVT1-215ENST00000522963 GOLGA2Q08379 1002 aa15.55■□□□□ 0.08
PVT1-215ENST00000522963 TTC5Q8N0Z6 440 aa15.55■□□□□ 0.08
PVT1-215ENST00000522963 CDCA7LQ96GN5 454 aa15.55■□□□□ 0.08
PVT1-215ENST00000522963 SLC4A9Q96Q91 983 aa15.55■□□□□ 0.08
PVT1-215ENST00000522963 MRC1P22897 1456 aa15.54■□□□□ 0.08
PVT1-215ENST00000522963 PNPLA7Q6ZV29 1317 aa15.54■□□□□ 0.08
PVT1-215ENST00000522963 PHF14O94880 888 aa15.54■□□□□ 0.08
PVT1-215ENST00000522963 ZNF853P0CG23 659 aa15.54■□□□□ 0.08
PVT1-215ENST00000522963 HMGB2P26583 209 aaKnown RBP15.54■□□□□ 0.08
PVT1-215ENST00000522963 TAF7Q15545 349 aaPredicted RBP15.54■□□□□ 0.08
PVT1-215ENST00000522963 SMIM5Q71RC9 77 aa15.54■□□□□ 0.08
PVT1-215ENST00000522963 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
PVT1-215ENST00000522963 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
PVT1-215ENST00000522963 C4BP0C0L5 1744 aa15.54■□□□□ 0.08
PVT1-215ENST00000522963 BTBD11A6QL63 1104 aa15.53■□□□□ 0.08
PVT1-215ENST00000522963 CHL1O00533 1208 aa15.53■□□□□ 0.08
PVT1-215ENST00000522963 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
PVT1-215ENST00000522963 IFT57Q9NWB7 429 aa15.53■□□□□ 0.08
PVT1-215ENST00000522963 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
PVT1-215ENST00000522963 CASZ1Q86V15 1759 aa15.53■□□□□ 0.08
PVT1-215ENST00000522963 GNPATO15228 680 aa15.52■□□□□ 0.08
PVT1-215ENST00000522963 GNAI1P63096 354 aa15.52■□□□□ 0.08
PVT1-215ENST00000522963 SLFN5Q08AF3 891 aa15.52■□□□□ 0.08
PVT1-215ENST00000522963 E9PSI1 815 aa15.51■□□□□ 0.07
PVT1-215ENST00000522963 COL23A1Q86Y22 540 aaPredicted RBP15.51■□□□□ 0.07
PVT1-215ENST00000522963 DNAJC10Q8IXB1 793 aa15.51■□□□□ 0.07
PVT1-215ENST00000522963 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
PVT1-215ENST00000522963 PPP1R1BQ9UD71 204 aaPredicted RBP15.51■□□□□ 0.07
PVT1-215ENST00000522963 TSPYL4Q9UJ04 414 aa15.51■□□□□ 0.07
PVT1-215ENST00000522963 SIPA1L3O60292 1781 aaPredicted RBP15.51■□□□□ 0.07
PVT1-215ENST00000522963 KCNQ3O43525 872 aa15.5■□□□□ 0.07
PVT1-215ENST00000522963 ZNF790Q6PG37 636 aa15.5■□□□□ 0.07
PVT1-215ENST00000522963 TRMT2AQ8IZ69 625 aaKnown RBP15.5■□□□□ 0.07
PVT1-215ENST00000522963 MBIPQ9NS73 344 aa15.5■□□□□ 0.07
PVT1-215ENST00000522963 BABAM1Q9NWV8 329 aa15.5■□□□□ 0.07
PVT1-215ENST00000522963 FANCIQ9NVI1 1328 aa15.49■□□□□ 0.07
PVT1-215ENST00000522963 QSER1Q2KHR3 1735 aa15.49■□□□□ 0.07
PVT1-215ENST00000522963 MSL1Q68DK7 614 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms