RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 FAM161AQ3B820 660 aa21.29■■□□□ 1
SREK1-212ENST00000522912 C8orf34Q49A92 452 aa21.29■■□□□ 1
SREK1-212ENST00000522912 BTBD11A6QL63 1104 aa21.28■■□□□ 1
SREK1-212ENST00000522912 TATP17735 454 aaPredicted RBP21.28■■□□□ 1
SREK1-212ENST00000522912 PRDM11Q9NQV5 511 aa21.28■■□□□ 1
SREK1-212ENST00000522912 SCN11AQ9UI33 1791 aa21.27■■□□□ 1
SREK1-212ENST00000522912 F6X3S4 739 aa21.26■□□□□ 0.99
SREK1-212ENST00000522912 SIRT2Q8IXJ6 389 aa21.26■□□□□ 0.99
SREK1-212ENST00000522912 MSH5O43196 834 aa21.25■□□□□ 0.99
SREK1-212ENST00000522912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.25■□□□□ 0.992e-7■■■□□ 15.7
SREK1-212ENST00000522912 SPG7Q9UQ90 795 aa21.25■□□□□ 0.99
SREK1-212ENST00000522912 PKD1L3Q7Z443 1732 aa21.25■□□□□ 0.99
SREK1-212ENST00000522912 FLIIQ13045 1269 aa21.24■□□□□ 0.99
SREK1-212ENST00000522912 HDGFL1Q5TGJ6 251 aa21.24■□□□□ 0.99
SREK1-212ENST00000522912 PHKG2P15735 406 aa21.24■□□□□ 0.99
SREK1-212ENST00000522912 KDM6AO15550 1401 aaPredicted RBP21.23■□□□□ 0.99
SREK1-212ENST00000522912 HOXB7P09629 217 aa21.23■□□□□ 0.99
SREK1-212ENST00000522912 PLEKHG2Q9H7P9 1386 aa21.23■□□□□ 0.99
SREK1-212ENST00000522912 WDR17Q8IZU2 1322 aa21.22■□□□□ 0.99
SREK1-212ENST00000522912 COL5A2P05997 1499 aaPredicted RBP21.22■□□□□ 0.99
SREK1-212ENST00000522912 SLC4A10Q6U841 1118 aa21.21■□□□□ 0.99
SREK1-212ENST00000522912 EIF2S2P20042 333 aaKnown RBP21.21■□□□□ 0.99
SREK1-212ENST00000522912 FKBP5Q13451 457 aaPredicted RBP21.21■□□□□ 0.99
SREK1-212ENST00000522912 MEIS3Q99687 375 aa21.21■□□□□ 0.99
SREK1-212ENST00000522912 HEG1Q9ULI3 1381 aa21.21■□□□□ 0.99
SREK1-212ENST00000522912 ANP32AP39687 249 aaKnown RBP21.2■□□□□ 0.98
SREK1-212ENST00000522912 CCT4P50991 539 aaKnown RBP21.2■□□□□ 0.98
SREK1-212ENST00000522912 NUCB1Q02818 461 aa21.2■□□□□ 0.98
SREK1-212ENST00000522912 IFNL2Q8IZJ0 200 aa21.2■□□□□ 0.98
SREK1-212ENST00000522912 ROBO1Q9Y6N7 1651 aa21.2■□□□□ 0.98
SREK1-212ENST00000522912 N4BP2Q86UW6 1770 aaPredicted RBP21.2■□□□□ 0.98
SREK1-212ENST00000522912 CYP27B1O15528 508 aa21.19■□□□□ 0.98
SREK1-212ENST00000522912 LTBP4Q8N2S1 1624 aa21.19■□□□□ 0.98
SREK1-212ENST00000522912 ATP10DQ9P241 1426 aa21.19■□□□□ 0.98
SREK1-212ENST00000522912 NPM2Q86SE8 214 aaKnown RBP21.19■□□□□ 0.98
SREK1-212ENST00000522912 PHAXQ9H814 394 aaKnown RBP21.19■□□□□ 0.98
SREK1-212ENST00000522912 TOM1L2Q6ZVM7 507 aa21.18■□□□□ 0.98
SREK1-212ENST00000522912 GCC1Q96CN9 775 aa21.18■□□□□ 0.98
SREK1-212ENST00000522912 SLC52A2Q9HAB3 445 aa21.18■□□□□ 0.98
SREK1-212ENST00000522912 PARP4Q9UKK3 1724 aaKnown RBP21.18■□□□□ 0.98
SREK1-212ENST00000522912 CHPF2Q9P2E5 772 aa21.17■□□□□ 0.98
SREK1-212ENST00000522912 GIGYF1O75420 1035 aaPredicted RBP21.17■□□□□ 0.98
SREK1-212ENST00000522912 ANKRD44Q8N8A2 993 aa21.17■□□□□ 0.98
SREK1-212ENST00000522912 CHD1LQ86WJ1 897 aa21.16■□□□□ 0.98
SREK1-212ENST00000522912 CEP85Q6P2H3 762 aa21.15■□□□□ 0.98
SREK1-212ENST00000522912 NFATC2IPQ8NCF5 419 aa21.15■□□□□ 0.98
SREK1-212ENST00000522912 DCAF5Q96JK2 942 aa21.15■□□□□ 0.98
SREK1-212ENST00000522912 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
SREK1-212ENST00000522912 LNPKQ9C0E8 428 aa21.15■□□□□ 0.98
SREK1-212ENST00000522912 MRC1P22897 1456 aa21.14■□□□□ 0.98
SREK1-212ENST00000522912 PRAMEF22A3QJZ6 481 aa21.14■□□□□ 0.98
SREK1-212ENST00000522912 SLC39A6Q13433 755 aa21.14■□□□□ 0.98
SREK1-212ENST00000522912 RPAP2Q8IXW5 612 aaPredicted RBP21.14■□□□□ 0.98
SREK1-212ENST00000522912 CARD10Q9BWT7 1032 aa21.14■□□□□ 0.98
SREK1-212ENST00000522912 AHDC1Q5TGY3 1603 aaPredicted RBP21.14■□□□□ 0.97
SREK1-212ENST00000522912 PXDNLA1KZ92 1463 aa21.14■□□□□ 0.97
SREK1-212ENST00000522912 ANKRD45Q5TZF3 282 aa21.14■□□□□ 0.97
SREK1-212ENST00000522912 ANXA1P04083 346 aa21.13■□□□□ 0.97
SREK1-212ENST00000522912 ZNF790Q6PG37 636 aa21.13■□□□□ 0.97
SREK1-212ENST00000522912 LARP1Q6PKG0 1096 aaKnown RBP21.13■□□□□ 0.97
SREK1-212ENST00000522912 STRN4Q9NRL3 753 aa21.13■□□□□ 0.97
SREK1-212ENST00000522912 IPO9Q96P70 1041 aaKnown RBP21.12■□□□□ 0.97
SREK1-212ENST00000522912 DCTPP1Q9H773 170 aa21.12■□□□□ 0.97
SREK1-212ENST00000522912 HSP90AB1P08238 724 aaKnown RBP21.12■□□□□ 0.97
SREK1-212ENST00000522912 C5P01031 1676 aa21.12■□□□□ 0.97
SREK1-212ENST00000522912 ZCRB1Q8TBF4 217 aaKnown RBP21.11■□□□□ 0.97
SREK1-212ENST00000522912 EVA1CP58658 441 aa21.11■□□□□ 0.97
SREK1-212ENST00000522912 DBF4Q9UBU7 674 aaPredicted RBP21.11■□□□□ 0.97
SREK1-212ENST00000522912 SHANK3Q9BYB0 1731 aa21.1■□□□□ 0.97
SREK1-212ENST00000522912 SEC24BO95487 1268 aa21.09■□□□□ 0.97
SREK1-212ENST00000522912 PROSER3Q2NL68 480 aa21.09■□□□□ 0.97
SREK1-212ENST00000522912 COL22A1Q8NFW1 1626 aaPredicted RBP21.09■□□□□ 0.97
SREK1-212ENST00000522912 IL2RBP14784 551 aa21.09■□□□□ 0.97
SREK1-212ENST00000522912 PCDH11XQ9BZA7 1347 aa21.08■□□□□ 0.97
SREK1-212ENST00000522912 PCDH11YQ9BZA8 1340 aa21.08■□□□□ 0.97
SREK1-212ENST00000522912 GNAI2P04899 355 aa21.08■□□□□ 0.97
SREK1-212ENST00000522912 GNAI3P08754 354 aa21.07■□□□□ 0.96
SREK1-212ENST00000522912 ADCY9O60503 1353 aa21.07■□□□□ 0.96
SREK1-212ENST00000522912 PI4KAP2A4QPH2 592 aa21.07■□□□□ 0.96
SREK1-212ENST00000522912 CABP4P57796 275 aa21.07■□□□□ 0.96
SREK1-212ENST00000522912 PI4KAP1Q8N8J0 262 aa21.07■□□□□ 0.96
SREK1-212ENST00000522912 ZNF496Q96IT1 587 aaPredicted RBP21.07■□□□□ 0.96
SREK1-212ENST00000522912 USP44Q9H0E7 712 aa21.07■□□□□ 0.96
SREK1-212ENST00000522912 COL14A1Q05707 1796 aaKnown RBP21.06■□□□□ 0.96
SREK1-212ENST00000522912 DNAAF4Q8WXU2 420 aa21.06■□□□□ 0.96
SREK1-212ENST00000522912 BTG4Q9NY30 223 aa21.06■□□□□ 0.96
SREK1-212ENST00000522912 COL16A1Q07092 1604 aaPredicted RBP21.06■□□□□ 0.96
SREK1-212ENST00000522912 SRCIN1Q9C0H9 1055 aa21.05■□□□□ 0.96
SREK1-212ENST00000522912 PDIA6Q15084 440 aa21.04■□□□□ 0.96
SREK1-212ENST00000522912 BEND3Q5T5X7 828 aa21.04■□□□□ 0.96
SREK1-212ENST00000522912 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
SREK1-212ENST00000522912 DDX21Q9NR30 783 aaKnown RBP eCLIP21.04■□□□□ 0.96
SREK1-212ENST00000522912 HYPKQ9NX55 129 aa21.04■□□□□ 0.96
SREK1-212ENST00000522912 HMMRO75330 724 aa21.03■□□□□ 0.96
SREK1-212ENST00000522912 TTC5Q8N0Z6 440 aa21.03■□□□□ 0.96
SREK1-212ENST00000522912 PHLPP1O60346 1717 aa21.03■□□□□ 0.96
SREK1-212ENST00000522912 USP35Q9P2H5 1018 aa21.02■□□□□ 0.96
SREK1-212ENST00000522912 LRRFIP2Q9Y608 721 aaKnown RBP21.02■□□□□ 0.96
SREK1-212ENST00000522912 GLI3P10071 1580 aa21.02■□□□□ 0.96
SREK1-212ENST00000522912 DDX54Q8TDD1 881 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms