RNA–Protein interactions for RNA: ENST00000522563.5

NSMCE2-210, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NSMCE2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-210ENST00000522563 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.5□□□□□ -0.57
NSMCE2-210ENST00000522563 CCDC97Q96F63 343 aaPredicted RBP11.5□□□□□ -0.57
NSMCE2-210ENST00000522563 SERTAD1Q9UHV2 236 aa11.5□□□□□ -0.57
NSMCE2-210ENST00000522563 ZNF594Q96JF6 807 aaPredicted RBP11.49□□□□□ -0.57
NSMCE2-210ENST00000522563 FHDC1Q9C0D6 1143 aaPredicted RBP11.49□□□□□ -0.57
NSMCE2-210ENST00000522563 GRIP2Q9C0E4 1043 aa11.49□□□□□ -0.57
NSMCE2-210ENST00000522563 DNAAF2Q9NVR5 837 aaKnown RBP11.49□□□□□ -0.57
NSMCE2-210ENST00000522563 RASA1P20936 1047 aa11.48□□□□□ -0.57
NSMCE2-210ENST00000522563 CRTC2Q53ET0 693 aaPredicted RBP11.48□□□□□ -0.57
NSMCE2-210ENST00000522563 ESCO1Q5FWF5 840 aa11.48□□□□□ -0.57
NSMCE2-210ENST00000522563 TPCN2Q8NHX9 752 aa11.48□□□□□ -0.57
NSMCE2-210ENST00000522563 SERPINA10Q9UK55 444 aa11.48□□□□□ -0.57
NSMCE2-210ENST00000522563 DKK1O94907 266 aa11.47□□□□□ -0.57
NSMCE2-210ENST00000522563 RHOQP17081 205 aa11.47□□□□□ -0.57
NSMCE2-210ENST00000522563 GPC1P35052 558 aa11.47□□□□□ -0.57
NSMCE2-210ENST00000522563 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.47□□□□□ -0.57
NSMCE2-210ENST00000522563 SLC27A3Q5K4L6 730 aa11.47□□□□□ -0.57
NSMCE2-210ENST00000522563 VRTNQ9H8Y1 702 aa11.47□□□□□ -0.57
NSMCE2-210ENST00000522563 ZNF358Q9NW07 568 aa11.47□□□□□ -0.57
NSMCE2-210ENST00000522563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.46□□□□□ -0.57
NSMCE2-210ENST00000522563 ATP1A2P50993 1020 aa11.46□□□□□ -0.57
NSMCE2-210ENST00000522563 CCDC102BQ68D86 513 aa11.46□□□□□ -0.57
NSMCE2-210ENST00000522563 LYSMD3Q7Z3D4 306 aa11.46□□□□□ -0.57
NSMCE2-210ENST00000522563 WASLO00401 505 aaPredicted RBP11.45□□□□□ -0.58
NSMCE2-210ENST00000522563 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
NSMCE2-210ENST00000522563 POU4F2Q12837 409 aa11.45□□□□□ -0.58
NSMCE2-210ENST00000522563 TLR1Q15399 786 aa11.45□□□□□ -0.58
NSMCE2-210ENST00000522563 LARGE2Q8N3Y3 721 aa11.45□□□□□ -0.58
NSMCE2-210ENST00000522563 ZNF775Q96BV0 537 aaPredicted RBP11.45□□□□□ -0.58
NSMCE2-210ENST00000522563 SFI1A8K8P3 1242 aa11.44□□□□□ -0.58
NSMCE2-210ENST00000522563 VEGFBP49765 207 aa11.44□□□□□ -0.58
NSMCE2-210ENST00000522563 PTSQ03393 145 aa11.44□□□□□ -0.58
NSMCE2-210ENST00000522563 PTK7Q13308 1070 aa11.44□□□□□ -0.58
NSMCE2-210ENST00000522563 ZSCAN10Q96SZ4 725 aaPredicted RBP11.44□□□□□ -0.58
NSMCE2-210ENST00000522563 SENP3-EIF4A1A0A087X0R7 540 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L10C9JJH3 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L21D6R901 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 SMTNP53814 917 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 SIX5Q8N196 739 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 SLC4A9Q96Q91 983 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 USP3Q9Y6I4 520 aa11.43□□□□□ -0.58
NSMCE2-210ENST00000522563 LARP1Q6PKG0 1096 aaKnown RBP11.42□□□□□ -0.58
NSMCE2-210ENST00000522563 A6NJY4 79 aa11.4□□□□□ -0.58
NSMCE2-210ENST00000522563 FAM196BA6NMK8 535 aa11.4□□□□□ -0.58
NSMCE2-210ENST00000522563 SPATA31C2B4DYI2 1134 aa11.4□□□□□ -0.58
NSMCE2-210ENST00000522563 PHKA2P46019 1235 aa11.4□□□□□ -0.58
NSMCE2-210ENST00000522563 DPYDQ12882 1025 aa11.4□□□□□ -0.58
NSMCE2-210ENST00000522563 NBPF10Q6P3W6 841 aaKnown RBP11.4□□□□□ -0.58
NSMCE2-210ENST00000522563 TNS4Q8IZW8 715 aa11.4□□□□□ -0.58
NSMCE2-210ENST00000522563 NBPF15Q8N660 670 aa11.4□□□□□ -0.58
NSMCE2-210ENST00000522563 SLC35F4A4IF30 521 aa11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 LGR5O75473 907 aa11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 EPHA4P54764 986 aa11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 MTFR1Q15390 333 aa11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 TMEM214Q6NUQ4 689 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 PPARGC1BQ86YN6 1023 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 TSEN2Q8NCE0 465 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 ARXQ96QS3 562 aa11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 ARID3AQ99856 593 aa11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 NXF1Q9UBU9 619 aaKnown RBP11.39□□□□□ -0.59
NSMCE2-210ENST00000522563 PPFIA3O75145 1194 aa11.38□□□□□ -0.59
NSMCE2-210ENST00000522563 C4orf17Q53FE4 359 aa11.38□□□□□ -0.59
NSMCE2-210ENST00000522563 TBCELQ5QJ74 424 aa11.38□□□□□ -0.59
NSMCE2-210ENST00000522563 ANKMY2Q8IV38 441 aa11.38□□□□□ -0.59
NSMCE2-210ENST00000522563 CCDC155Q8N6L0 562 aa11.38□□□□□ -0.59
NSMCE2-210ENST00000522563 IQSEC3Q9UPP2 1182 aaPredicted RBP11.38□□□□□ -0.59
NSMCE2-210ENST00000522563 TERTO14746 1132 aaKnown RBP11.37□□□□□ -0.59
NSMCE2-210ENST00000522563 BACH1O14867 736 aa11.37□□□□□ -0.59
NSMCE2-210ENST00000522563 TAS1R3Q7RTX0 852 aa11.37□□□□□ -0.59
NSMCE2-210ENST00000522563 LCE2CQ5TA81 110 aa11.36□□□□□ -0.59
NSMCE2-210ENST00000522563 ZNF295-AS1Q8N0V1 137 aa11.36□□□□□ -0.59
NSMCE2-210ENST00000522563 PBXIP1Q96AQ6 731 aa11.36□□□□□ -0.59
NSMCE2-210ENST00000522563 SCHIP1Q9P0W5 487 aaPredicted RBP11.36□□□□□ -0.59
NSMCE2-210ENST00000522563 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
NSMCE2-210ENST00000522563 SEC13P55735 322 aa11.35□□□□□ -0.59
NSMCE2-210ENST00000522563 NFX1Q12986 1120 aaKnown RBP11.35□□□□□ -0.59
NSMCE2-210ENST00000522563 RHBDD1Q8TEB9 315 aa11.35□□□□□ -0.59
NSMCE2-210ENST00000522563 CDK2AP1O14519 115 aa11.34□□□□□ -0.59
NSMCE2-210ENST00000522563 FOXK2Q01167 660 aa11.34□□□□□ -0.59
NSMCE2-210ENST00000522563 GNASQ5JWF2 1037 aa11.34□□□□□ -0.59
NSMCE2-210ENST00000522563 CUEDC1Q9NWM3 386 aaPredicted RBP11.34□□□□□ -0.59
NSMCE2-210ENST00000522563 NOVA2Q9UNW9 492 aaKnown RBP11.34□□□□□ -0.59
NSMCE2-210ENST00000522563 RBM19Q9Y4C8 960 aaKnown RBP11.34□□□□□ -0.59
NSMCE2-210ENST00000522563 H3BM21 787 aa11.33□□□□□ -0.6
NSMCE2-210ENST00000522563 M0R2N6 131 aa11.33□□□□□ -0.6
NSMCE2-210ENST00000522563 GTF2E1P29083 439 aaPredicted RBP11.33□□□□□ -0.6
NSMCE2-210ENST00000522563 SLC9A9Q8IVB4 645 aa11.33□□□□□ -0.6
NSMCE2-210ENST00000522563 GAS2L2Q8NHY3 880 aa11.33□□□□□ -0.6
NSMCE2-210ENST00000522563 STK32AQ8WU08 396 aa11.33□□□□□ -0.6
NSMCE2-210ENST00000522563 TSPAN10Q9H1Z9 355 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms