RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 CABP4P57796 275 aa25.04■■□□□ 1.6
TOP1MT-216ENST00000522121 GPR162Q16538 588 aa25.04■■□□□ 1.6
TOP1MT-216ENST00000522121 LINC00116Q8NCU8 138 aa25.04■■□□□ 1.6
TOP1MT-216ENST00000522121 KDRP35968 1356 aa25.04■■□□□ 1.6
TOP1MT-216ENST00000522121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.03■■□□□ 1.6
TOP1MT-216ENST00000522121 SSFA2P28290 1259 aa25.03■■□□□ 1.6
TOP1MT-216ENST00000522121 ITPK1Q13572 414 aa25.02■■□□□ 1.6
TOP1MT-216ENST00000522121 RBM42Q9BTD8 480 aaKnown RBP25.01■■□□□ 1.59
TOP1MT-216ENST00000522121 GNPATO15228 680 aa25■■□□□ 1.59
TOP1MT-216ENST00000522121 KDM6AO15550 1401 aaPredicted RBP25■■□□□ 1.59
TOP1MT-216ENST00000522121 AMIGO3Q86WK7 504 aa24.99■■□□□ 1.59
TOP1MT-216ENST00000522121 PELP1Q8IZL8 1130 aaKnown RBP24.99■■□□□ 1.59
TOP1MT-216ENST00000522121 NLGN2Q8NFZ4 835 aa24.99■■□□□ 1.59
TOP1MT-216ENST00000522121 NPC1L1Q9UHC9 1359 aa24.98■■□□□ 1.59
TOP1MT-216ENST00000522121 DIAPH1O60610 1272 aaKnown RBP24.98■■□□□ 1.59
TOP1MT-216ENST00000522121 SMIM5Q71RC9 77 aa24.97■■□□□ 1.59
TOP1MT-216ENST00000522121 CNGB1Q14028 1251 aaPredicted RBP24.96■■□□□ 1.59
TOP1MT-216ENST00000522121 AKAP4Q5JQC9 854 aa24.96■■□□□ 1.59
TOP1MT-216ENST00000522121 CD2APQ9Y5K6 639 aa24.96■■□□□ 1.59
TOP1MT-216ENST00000522121 HMOX1P09601 288 aa24.95■■□□□ 1.58
TOP1MT-216ENST00000522121 NFATC2IPQ8NCF5 419 aa24.95■■□□□ 1.58
TOP1MT-216ENST00000522121 UBR3Q6ZT12 1888 aa24.95■■□□□ 1.58
TOP1MT-216ENST00000522121 SLC4A9Q96Q91 983 aa24.94■■□□□ 1.58
TOP1MT-216ENST00000522121 RTCBQ9Y3I0 505 aaKnown RBP24.94■■□□□ 1.58
TOP1MT-216ENST00000522121 RC3H1Q5TC82 1133 aaKnown RBP24.93■■□□□ 1.58
TOP1MT-216ENST00000522121 PTCD1O75127 700 aaKnown RBP24.92■■□□□ 1.58
TOP1MT-216ENST00000522121 TRAPPC3LQ5T215 181 aa24.92■■□□□ 1.58
TOP1MT-216ENST00000522121 ZNF831Q5JPB2 1677 aa24.91■■□□□ 1.58
TOP1MT-216ENST00000522121 CNTNAP4Q9C0A0 1308 aa24.9■■□□□ 1.58
TOP1MT-216ENST00000522121 GRIN3BO60391 1043 aa24.9■■□□□ 1.58
TOP1MT-216ENST00000522121 ADRA2BP18089 450 aa24.89■■□□□ 1.58
TOP1MT-216ENST00000522121 ZNF784Q8NCA9 323 aaPredicted RBP24.88■■□□□ 1.57
TOP1MT-216ENST00000522121 SLC52A2Q9HAB3 445 aa24.88■■□□□ 1.57
TOP1MT-216ENST00000522121 U2SURPO15042 1029 aaKnown RBP24.87■■□□□ 1.57
TOP1MT-216ENST00000522121 RPS6KA4O75676 772 aa24.87■■□□□ 1.57
TOP1MT-216ENST00000522121 MTHFSDQ2M296 383 aaKnown RBP24.87■■□□□ 1.57
TOP1MT-216ENST00000522121 RNMTO43148 476 aaKnown RBP24.86■■□□□ 1.57
TOP1MT-216ENST00000522121 NLGN1Q8N2Q7 840 aa24.86■■□□□ 1.57
TOP1MT-216ENST00000522121 ARHGEF1Q92888 912 aaKnown RBP24.86■■□□□ 1.57
TOP1MT-216ENST00000522121 LGR6Q9HBX8 967 aa24.86■■□□□ 1.57
TOP1MT-216ENST00000522121 YBX3P16989 372 aaKnown RBP eCLIP24.85■■□□□ 1.577e-8■□□□□ 10.1
TOP1MT-216ENST00000522121 RFC4P35249 363 aa24.85■■□□□ 1.57
TOP1MT-216ENST00000522121 CHD4Q14839 1912 aa24.84■■□□□ 1.57
TOP1MT-216ENST00000522121 MMP10P09238 476 aa24.84■■□□□ 1.57
TOP1MT-216ENST00000522121 CRKLP46109 303 aaKnown RBP24.84■■□□□ 1.57
TOP1MT-216ENST00000522121 CFAP53Q96M91 514 aa24.84■■□□□ 1.57
TOP1MT-216ENST00000522121 UTRNP46939 3433 aa24.83■■□□□ 1.57
TOP1MT-216ENST00000522121 SCN11AQ9UI33 1791 aa24.83■■□□□ 1.57
TOP1MT-216ENST00000522121 COL3A1P02461 1466 aaPredicted RBP24.83■■□□□ 1.56
TOP1MT-216ENST00000522121 COL5A3P25940 1745 aaPredicted RBP24.81■■□□□ 1.56
TOP1MT-216ENST00000522121 MRC1P22897 1456 aa24.79■■□□□ 1.56
TOP1MT-216ENST00000522121 GYS1P13807 737 aa24.79■■□□□ 1.56
TOP1MT-216ENST00000522121 GAS2L2Q8NHY3 880 aa24.79■■□□□ 1.56
TOP1MT-216ENST00000522121 SLC39A6Q13433 755 aa24.78■■□□□ 1.56
TOP1MT-216ENST00000522121 NUDCQ9Y266 331 aa24.78■■□□□ 1.56
TOP1MT-216ENST00000522121 GNAT3A8MTJ3 354 aa24.76■■□□□ 1.55
TOP1MT-216ENST00000522121 DNAJC10Q8IXB1 793 aa24.76■■□□□ 1.55
TOP1MT-216ENST00000522121 CCDC87Q9NVE4 849 aa24.76■■□□□ 1.55
TOP1MT-216ENST00000522121 PARP3Q9Y6F1 533 aa24.76■■□□□ 1.55
TOP1MT-216ENST00000522121 INTS5Q6P9B9 1019 aaKnown RBP24.75■■□□□ 1.55
TOP1MT-216ENST00000522121 CICQ96RK0 1608 aaPredicted RBP24.75■■□□□ 1.55
TOP1MT-216ENST00000522121 TEFQ10587 303 aa24.74■■□□□ 1.55
TOP1MT-216ENST00000522121 TTC5Q8N0Z6 440 aa24.74■■□□□ 1.55
TOP1MT-216ENST00000522121 TJP1Q07157 1748 aa24.74■■□□□ 1.55
TOP1MT-216ENST00000522121 GOLGB1Q14789 3259 aaKnown RBP24.74■■□□□ 1.55
TOP1MT-216ENST00000522121 PPP2R1AP30153 589 aa24.73■■□□□ 1.55
TOP1MT-216ENST00000522121 TGFB2P61812 414 aa24.73■■□□□ 1.55
TOP1MT-216ENST00000522121 VSIG10Q8N0Z9 540 aa24.73■■□□□ 1.55
TOP1MT-216ENST00000522121 MYH14Q7Z406 1995 aaKnown RBP24.73■■□□□ 1.55
TOP1MT-216ENST00000522121 ADAMTS7Q9UKP4 1686 aa24.72■■□□□ 1.55
TOP1MT-216ENST00000522121 USP42Q9H9J4 1324 aaKnown RBP24.72■■□□□ 1.55
TOP1MT-216ENST00000522121 CYP19A1P11511 503 aaPredicted RBP24.72■■□□□ 1.55
TOP1MT-216ENST00000522121 PRKAR2BP31323 418 aa24.72■■□□□ 1.55
TOP1MT-216ENST00000522121 SRP68Q9UHB9 627 aaKnown RBP24.72■■□□□ 1.55
TOP1MT-216ENST00000522121 WWC3Q9ULE0 1092 aa24.72■■□□□ 1.55
TOP1MT-216ENST00000522121 ZPR1O75312 459 aa24.71■■□□□ 1.55
TOP1MT-216ENST00000522121 U2AF1L5P0DN76 240 aaPredicted RBP24.7■■□□□ 1.54
TOP1MT-216ENST00000522121 U2AF1Q01081 240 aaKnown RBP eCLIP24.7■■□□□ 1.54
TOP1MT-216ENST00000522121 IL17REQ8NFR9 667 aa24.7■■□□□ 1.54
TOP1MT-216ENST00000522121 RSPH6AQ9H0K4 717 aa24.7■■□□□ 1.54
TOP1MT-216ENST00000522121 KCPQ6ZWJ8 1503 aa24.7■■□□□ 1.54
TOP1MT-216ENST00000522121 C10orf71Q711Q0 1435 aa24.69■■□□□ 1.54
TOP1MT-216ENST00000522121 SOS1Q07889 1333 aaPredicted RBP24.68■■□□□ 1.54
TOP1MT-216ENST00000522121 FKBP8Q14318 412 aa24.68■■□□□ 1.54
TOP1MT-216ENST00000522121 PHACTR3Q96KR7 559 aa24.68■■□□□ 1.54
TOP1MT-216ENST00000522121 C4AP0C0L4 1744 aa24.68■■□□□ 1.54
TOP1MT-216ENST00000522121 PXDNLA1KZ92 1463 aa24.67■■□□□ 1.54
TOP1MT-216ENST00000522121 STARD3NLO95772 234 aa24.67■■□□□ 1.54
TOP1MT-216ENST00000522121 VIRMAQ69YN4 1812 aaKnown RBP24.66■■□□□ 1.54
TOP1MT-216ENST00000522121 A0A0G2JLW4 131 aa24.66■■□□□ 1.54
TOP1MT-216ENST00000522121 FCHSD2O94868 740 aa24.66■■□□□ 1.54
TOP1MT-216ENST00000522121 ZNF790Q6PG37 636 aa24.66■■□□□ 1.54
TOP1MT-216ENST00000522121 USPL1Q5W0Q7 1092 aa24.65■■□□□ 1.54
TOP1MT-216ENST00000522121 TEX13AQ9BXU3 409 aaPredicted RBP24.65■■□□□ 1.54
TOP1MT-216ENST00000522121 ZBTB1Q9Y2K1 713 aa24.65■■□□□ 1.54
TOP1MT-216ENST00000522121 GIGYF1O75420 1035 aaPredicted RBP24.64■■□□□ 1.54
TOP1MT-216ENST00000522121 COL15A1P39059 1388 aa24.64■■□□□ 1.53
TOP1MT-216ENST00000522121 KIF13BQ9NQT8 1826 aa24.63■■□□□ 1.53
TOP1MT-216ENST00000522121 DPEP1P16444 411 aa24.63■■□□□ 1.53
TOP1MT-216ENST00000522121 RTF1Q92541 710 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 510.5 ms