RNA–Protein interactions for RNA: ENST00000521664.1

NDRG1-220, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-220ENST00000521664 AKAP4Q5JQC9 854 aa23.02■■□□□ 1.28
NDRG1-220ENST00000521664 LINC00116Q8NCU8 138 aa23.02■■□□□ 1.28
NDRG1-220ENST00000521664 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
NDRG1-220ENST00000521664 KDM6AO15550 1401 aaPredicted RBP23.01■■□□□ 1.27
NDRG1-220ENST00000521664 U2SURPO15042 1029 aaKnown RBP23.01■■□□□ 1.27
NDRG1-220ENST00000521664 PHF14O94880 888 aa23.01■■□□□ 1.27
NDRG1-220ENST00000521664 MSL1Q68DK7 614 aa23.01■■□□□ 1.27
NDRG1-220ENST00000521664 CFAP53Q96M91 514 aa23.01■■□□□ 1.27
NDRG1-220ENST00000521664 C4BP0C0L5 1744 aa23.01■■□□□ 1.27
NDRG1-220ENST00000521664 ITPK1Q13572 414 aa23■■□□□ 1.27
NDRG1-220ENST00000521664 NFATC2IPQ8NCF5 419 aa23■■□□□ 1.27
NDRG1-220ENST00000521664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.99■■□□□ 1.27
NDRG1-220ENST00000521664 GNPATO15228 680 aa22.99■■□□□ 1.27
NDRG1-220ENST00000521664 SSFA2P28290 1259 aa22.99■■□□□ 1.27
NDRG1-220ENST00000521664 MAP3K5Q99683 1374 aa22.99■■□□□ 1.27
NDRG1-220ENST00000521664 YY1P25490 414 aa22.97■■□□□ 1.27
NDRG1-220ENST00000521664 PTCD1O75127 700 aaKnown RBP22.96■■□□□ 1.27
NDRG1-220ENST00000521664 MTHFSDQ2M296 383 aaKnown RBP22.95■■□□□ 1.26
NDRG1-220ENST00000521664 SMIM5Q71RC9 77 aa22.94■■□□□ 1.26
NDRG1-220ENST00000521664 AMIGO3Q86WK7 504 aa22.94■■□□□ 1.26
NDRG1-220ENST00000521664 SLC4A9Q96Q91 983 aa22.94■■□□□ 1.26
NDRG1-220ENST00000521664 LGR6Q9HBX8 967 aa22.94■■□□□ 1.26
NDRG1-220ENST00000521664 NUDCQ9Y266 331 aa22.94■■□□□ 1.26
NDRG1-220ENST00000521664 RTCBQ9Y3I0 505 aaKnown RBP22.94■■□□□ 1.26
NDRG1-220ENST00000521664 RNMTO43148 476 aaKnown RBP22.93■■□□□ 1.26
NDRG1-220ENST00000521664 GPR162Q16538 588 aa22.93■■□□□ 1.26
NDRG1-220ENST00000521664 TRAPPC3LQ5T215 181 aa22.93■■□□□ 1.26
NDRG1-220ENST00000521664 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
NDRG1-220ENST00000521664 COL24A1Q17RW2 1714 aa22.93■■□□□ 1.26
NDRG1-220ENST00000521664 PPP2R1AP30153 589 aa22.92■■□□□ 1.26
NDRG1-220ENST00000521664 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
NDRG1-220ENST00000521664 COL3A1P02461 1466 aaPredicted RBP22.92■■□□□ 1.26
NDRG1-220ENST00000521664 PELP1Q8IZL8 1130 aaKnown RBP22.91■■□□□ 1.26
NDRG1-220ENST00000521664 GAS2L2Q8NHY3 880 aa22.91■■□□□ 1.26
NDRG1-220ENST00000521664 UBR3Q6ZT12 1888 aa22.91■■□□□ 1.26
NDRG1-220ENST00000521664 CNTNAP4Q9C0A0 1308 aa22.89■■□□□ 1.26
NDRG1-220ENST00000521664 SCN11AQ9UI33 1791 aa22.89■■□□□ 1.25
NDRG1-220ENST00000521664 RPS6KA4O75676 772 aa22.88■■□□□ 1.25
NDRG1-220ENST00000521664 ADRA2BP18089 450 aa22.88■■□□□ 1.25
NDRG1-220ENST00000521664 NLGN2Q8NFZ4 835 aa22.88■■□□□ 1.25
NDRG1-220ENST00000521664 RFC4P35249 363 aa22.87■■□□□ 1.25
NDRG1-220ENST00000521664 CD2APQ9Y5K6 639 aa22.87■■□□□ 1.25
NDRG1-220ENST00000521664 ZNF831Q5JPB2 1677 aa22.87■■□□□ 1.25
NDRG1-220ENST00000521664 GNAT3A8MTJ3 354 aa22.86■■□□□ 1.25
NDRG1-220ENST00000521664 U2AF1L5P0DN76 240 aaPredicted RBP22.86■■□□□ 1.25
NDRG1-220ENST00000521664 U2AF1Q01081 240 aaKnown RBP eCLIP22.86■■□□□ 1.25
NDRG1-220ENST00000521664 UTRNP46939 3433 aa22.85■■□□□ 1.25
NDRG1-220ENST00000521664 PRKAR2BP31323 418 aa22.85■■□□□ 1.25
NDRG1-220ENST00000521664 CRKLP46109 303 aaKnown RBP22.85■■□□□ 1.25
NDRG1-220ENST00000521664 SLC39A6Q13433 755 aa22.85■■□□□ 1.25
NDRG1-220ENST00000521664 ARHGEF1Q92888 912 aaKnown RBP22.85■■□□□ 1.25
NDRG1-220ENST00000521664 TEFQ10587 303 aa22.84■■□□□ 1.25
NDRG1-220ENST00000521664 NLGN1Q8N2Q7 840 aa22.84■■□□□ 1.25
NDRG1-220ENST00000521664 TTC5Q8N0Z6 440 aa22.83■■□□□ 1.25
NDRG1-220ENST00000521664 RSPH6AQ9H0K4 717 aa22.83■■□□□ 1.25
NDRG1-220ENST00000521664 FCHSD2O94868 740 aa22.81■■□□□ 1.24
NDRG1-220ENST00000521664 MMP10P09238 476 aa22.81■■□□□ 1.24
NDRG1-220ENST00000521664 DNAJC10Q8IXB1 793 aa22.81■■□□□ 1.24
NDRG1-220ENST00000521664 PHACTR3Q96KR7 559 aa22.81■■□□□ 1.24
NDRG1-220ENST00000521664 MRC1P22897 1456 aa22.8■■□□□ 1.24
NDRG1-220ENST00000521664 IL17REQ8NFR9 667 aa22.8■■□□□ 1.24
NDRG1-220ENST00000521664 GOLGB1Q14789 3259 aaKnown RBP22.8■■□□□ 1.24
NDRG1-220ENST00000521664 COL5A3P25940 1745 aaPredicted RBP22.79■■□□□ 1.24
NDRG1-220ENST00000521664 GRIN3BO60391 1043 aa22.79■■□□□ 1.24
NDRG1-220ENST00000521664 CCDC87Q9NVE4 849 aa22.79■■□□□ 1.24
NDRG1-220ENST00000521664 VSIG10Q8N0Z9 540 aa22.78■■□□□ 1.24
NDRG1-220ENST00000521664 NEFMP07197 916 aa22.77■■□□□ 1.24
NDRG1-220ENST00000521664 GYS1P13807 737 aa22.77■■□□□ 1.24
NDRG1-220ENST00000521664 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
NDRG1-220ENST00000521664 RTF1Q92541 710 aaKnown RBP22.77■■□□□ 1.24
NDRG1-220ENST00000521664 MYH14Q7Z406 1995 aaKnown RBP22.76■■□□□ 1.23
NDRG1-220ENST00000521664 VIRMAQ69YN4 1812 aaKnown RBP22.76■■□□□ 1.23
NDRG1-220ENST00000521664 PARP3Q9Y6F1 533 aa22.76■■□□□ 1.23
NDRG1-220ENST00000521664 ADAMTS7Q9UKP4 1686 aa22.75■■□□□ 1.23
NDRG1-220ENST00000521664 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
NDRG1-220ENST00000521664 ZPR1O75312 459 aa22.74■■□□□ 1.23
NDRG1-220ENST00000521664 STARD3NLO95772 234 aa22.74■■□□□ 1.23
NDRG1-220ENST00000521664 YBX3P16989 372 aaKnown RBP eCLIP22.74■■□□□ 1.23
NDRG1-220ENST00000521664 ZNF790Q6PG37 636 aa22.74■■□□□ 1.23
NDRG1-220ENST00000521664 TJP1Q07157 1748 aa22.74■■□□□ 1.23
NDRG1-220ENST00000521664 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
NDRG1-220ENST00000521664 TEX13AQ9BXU3 409 aaPredicted RBP22.73■■□□□ 1.23
NDRG1-220ENST00000521664 SRP68Q9UHB9 627 aaKnown RBP22.73■■□□□ 1.23
NDRG1-220ENST00000521664 CHD4Q14839 1912 aa22.72■■□□□ 1.23
NDRG1-220ENST00000521664 KCPQ6ZWJ8 1503 aa22.72■■□□□ 1.23
NDRG1-220ENST00000521664 BTBD11A6QL63 1104 aa22.72■■□□□ 1.23
NDRG1-220ENST00000521664 RALBP1Q15311 655 aa22.72■■□□□ 1.23
NDRG1-220ENST00000521664 USP42Q9H9J4 1324 aaKnown RBP22.72■■□□□ 1.23
NDRG1-220ENST00000521664 CICQ96RK0 1608 aaPredicted RBP22.71■■□□□ 1.23
NDRG1-220ENST00000521664 ZNF496Q96IT1 587 aaPredicted RBP22.71■■□□□ 1.23
NDRG1-220ENST00000521664 FMNL2Q96PY5 1086 aa22.71■■□□□ 1.23
NDRG1-220ENST00000521664 SOS1Q07889 1333 aaPredicted RBP22.71■■□□□ 1.23
NDRG1-220ENST00000521664 CEMIPQ8WUJ3 1361 aa22.71■■□□□ 1.23
NDRG1-220ENST00000521664 CANXP27824 592 aaKnown RBP22.7■■□□□ 1.22
NDRG1-220ENST00000521664 ZBTB1Q9Y2K1 713 aa22.7■■□□□ 1.22
NDRG1-220ENST00000521664 HTATSF1O43719 755 aaKnown RBP22.69■■□□□ 1.22
NDRG1-220ENST00000521664 FKBP8Q14318 412 aa22.69■■□□□ 1.22
NDRG1-220ENST00000521664 USPL1Q5W0Q7 1092 aa22.69■■□□□ 1.22
NDRG1-220ENST00000521664 MCM10Q7L590 875 aa22.69■■□□□ 1.22
NDRG1-220ENST00000521664 ZNF784Q8NCA9 323 aaPredicted RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms