RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 DDB1Q16531 1140 aa19.48■□□□□ 0.71
SREK1-209ENST00000520953 GJD4Q96KN9 370 aaPredicted RBP19.48■□□□□ 0.71
SREK1-209ENST00000520953 PLIN1O60240 522 aa19.47■□□□□ 0.71
SREK1-209ENST00000520953 NKX1-1Q15270 411 aaPredicted RBP19.47■□□□□ 0.71
SREK1-209ENST00000520953 SLC52A2Q9HAB3 445 aa19.47■□□□□ 0.71
SREK1-209ENST00000520953 BTBD11A6QL63 1104 aa19.47■□□□□ 0.71
SREK1-209ENST00000520953 TCERG1O14776 1098 aaKnown RBP19.47■□□□□ 0.71
SREK1-209ENST00000520953 SLC39A6Q13433 755 aa19.47■□□□□ 0.71
SREK1-209ENST00000520953 QTRT2Q9H974 415 aaKnown RBP19.47■□□□□ 0.71
SREK1-209ENST00000520953 KDM3BQ7LBC6 1761 aa19.47■□□□□ 0.71
SREK1-209ENST00000520953 A0A0G2JS52 829 aa19.46■□□□□ 0.71
SREK1-209ENST00000520953 MYT1Q01538 1121 aa19.46■□□□□ 0.71
SREK1-209ENST00000520953 MARCH10Q8NA82 808 aaPredicted RBP19.46■□□□□ 0.71
SREK1-209ENST00000520953 MRC1P22897 1456 aa19.46■□□□□ 0.71
SREK1-209ENST00000520953 RARSP54136 660 aaKnown RBP19.46■□□□□ 0.71
SREK1-209ENST00000520953 TRPC5Q9UL62 973 aaPredicted RBP19.46■□□□□ 0.71
SREK1-209ENST00000520953 VAMP4O75379 141 aa19.45■□□□□ 0.7
SREK1-209ENST00000520953 HSP90AB1P08238 724 aaKnown RBP19.45■□□□□ 0.7
SREK1-209ENST00000520953 CDCA7Q9BWT1 371 aaPredicted RBP19.45■□□□□ 0.7
SREK1-209ENST00000520953 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
SREK1-209ENST00000520953 RNF123Q5XPI4 1314 aa19.44■□□□□ 0.7
SREK1-209ENST00000520953 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
SREK1-209ENST00000520953 CABP4P57796 275 aa19.44■□□□□ 0.7
SREK1-209ENST00000520953 EP400Q96L91 3159 aa19.43■□□□□ 0.7
SREK1-209ENST00000520953 RRP1P56182 461 aaKnown RBP19.43■□□□□ 0.7
SREK1-209ENST00000520953 FAM182BQ5T319 152 aa19.43■□□□□ 0.7
SREK1-209ENST00000520953 SSH1Q8WYL5 1049 aa19.43■□□□□ 0.7
SREK1-209ENST00000520953 KAT6BQ8WYB5 2073 aa19.42■□□□□ 0.7
SREK1-209ENST00000520953 EIF4A1P60842 406 aaKnown RBP19.42■□□□□ 0.7
SREK1-209ENST00000520953 PRAMEF22A3QJZ6 481 aa19.41■□□□□ 0.7
SREK1-209ENST00000520953 DOT1LQ8TEK3 1739 aa19.4■□□□□ 0.7
SREK1-209ENST00000520953 ERVV-2B6SEH9 535 aa19.4■□□□□ 0.7
SREK1-209ENST00000520953 C20orf194Q5TEA3 1177 aa19.4■□□□□ 0.7
SREK1-209ENST00000520953 NECTIN2Q92692 538 aa19.4■□□□□ 0.7
SREK1-209ENST00000520953 ACSBG1Q96GR2 724 aa19.4■□□□□ 0.7
SREK1-209ENST00000520953 BABAM1Q9NWV8 329 aa19.4■□□□□ 0.7
SREK1-209ENST00000520953 RGS17Q9UGC6 210 aaPredicted RBP19.4■□□□□ 0.7
SREK1-209ENST00000520953 TNNQ9UQP3 1299 aa19.4■□□□□ 0.7
SREK1-209ENST00000520953 ITGB4P16144 1822 aa19.4■□□□□ 0.7
SREK1-209ENST00000520953 ZNF790Q6PG37 636 aa19.39■□□□□ 0.69
SREK1-209ENST00000520953 SMC4Q9NTJ3 1288 aa19.39■□□□□ 0.69
SREK1-209ENST00000520953 SEPT12Q8IYM1 358 aa19.38■□□□□ 0.69
SREK1-209ENST00000520953 PIGBQ92521 554 aa19.38■□□□□ 0.69
SREK1-209ENST00000520953 SYTL4Q96C24 671 aaPredicted RBP19.38■□□□□ 0.69
SREK1-209ENST00000520953 CT47B1P0C2W7 299 aaPredicted RBP19.37■□□□□ 0.69
SREK1-209ENST00000520953 PRIM1P49642 420 aaKnown RBP19.37■□□□□ 0.69
SREK1-209ENST00000520953 ONECUT3O60422 494 aaPredicted RBP19.37■□□□□ 0.69
SREK1-209ENST00000520953 FRAT1Q92837 279 aaPredicted RBP19.37■□□□□ 0.69
SREK1-209ENST00000520953 ZNF496Q96IT1 587 aaPredicted RBP19.37■□□□□ 0.69
SREK1-209ENST00000520953 TMOD3Q9NYL9 352 aa19.36■□□□□ 0.69
SREK1-209ENST00000520953 PTF1AQ7RTS3 328 aa19.36■□□□□ 0.69
SREK1-209ENST00000520953 KCNQ2O43526 872 aa19.35■□□□□ 0.69
SREK1-209ENST00000520953 ASAP1Q9ULH1 1129 aa19.35■□□□□ 0.69
SREK1-209ENST00000520953 HEG1Q9ULI3 1381 aa19.35■□□□□ 0.69
SREK1-209ENST00000520953 PAPPAQ13219 1627 aa19.35■□□□□ 0.69
SREK1-209ENST00000520953 ZNF772Q68DY9 489 aaPredicted RBP19.34■□□□□ 0.69
SREK1-209ENST00000520953 C5P01031 1676 aa19.34■□□□□ 0.69
SREK1-209ENST00000520953 MRPL50Q8N5N7 158 aaKnown RBP19.34■□□□□ 0.69
SREK1-209ENST00000520953 BCL9O00512 1426 aa19.33■□□□□ 0.69
SREK1-209ENST00000520953 GIGYF1O75420 1035 aaPredicted RBP19.33■□□□□ 0.69
SREK1-209ENST00000520953 EIF2S2P20042 333 aaKnown RBP19.33■□□□□ 0.69
SREK1-209ENST00000520953 BRWD3Q6RI45 1802 aa19.33■□□□□ 0.69
SREK1-209ENST00000520953 KCPQ6ZWJ8 1503 aa19.33■□□□□ 0.68
SREK1-209ENST00000520953 PTCD1O75127 700 aaKnown RBP19.32■□□□□ 0.68
SREK1-209ENST00000520953 ALDH1L2Q3SY69 923 aa19.32■□□□□ 0.68
SREK1-209ENST00000520953 POTEAQ6S8J7 498 aa19.32■□□□□ 0.68
SREK1-209ENST00000520953 TTC5Q8N0Z6 440 aa19.32■□□□□ 0.68
SREK1-209ENST00000520953 ATG3Q9NT62 314 aa19.32■□□□□ 0.68
SREK1-209ENST00000520953 NOB1Q9ULX3 412 aaKnown RBP19.32■□□□□ 0.68
SREK1-209ENST00000520953 UBR2Q8IWV8 1755 aa19.31■□□□□ 0.68
SREK1-209ENST00000520953 ERICH6BQ5W0A0 696 aa19.31■□□□□ 0.68
SREK1-209ENST00000520953 ANXA1P04083 346 aa19.3■□□□□ 0.68
SREK1-209ENST00000520953 RBM6P78332 1123 aaKnown RBP19.3■□□□□ 0.68
SREK1-209ENST00000520953 HDGFL1Q5TGJ6 251 aa19.3■□□□□ 0.68
SREK1-209ENST00000520953 G2E3Q7L622 706 aa19.3■□□□□ 0.68
SREK1-209ENST00000520953 RLBP1P12271 317 aa19.3■□□□□ 0.68
SREK1-209ENST00000520953 CANXP27824 592 aaKnown RBP19.3■□□□□ 0.68
SREK1-209ENST00000520953 ILDR1Q86SU0 546 aaPredicted RBP19.3■□□□□ 0.68
SREK1-209ENST00000520953 PANK1Q8TE04 598 aa19.3■□□□□ 0.68
SREK1-209ENST00000520953 CLUAP1Q96AJ1 413 aa19.3■□□□□ 0.68
SREK1-209ENST00000520953 SLC4A2P04920 1241 aa19.29■□□□□ 0.68
SREK1-209ENST00000520953 ZNF428Q96B54 188 aa19.29■□□□□ 0.68
SREK1-209ENST00000520953 FMNL2Q96PY5 1086 aa19.29■□□□□ 0.68
SREK1-209ENST00000520953 TSHZ2Q9NRE2 1034 aa19.29■□□□□ 0.68
SREK1-209ENST00000520953 USP16Q9Y5T5 823 aa19.29■□□□□ 0.68
SREK1-209ENST00000520953 PIP4K2AP48426 406 aaPredicted RBP19.28■□□□□ 0.68
SREK1-209ENST00000520953 TRIM27P14373 513 aa19.27■□□□□ 0.68
SREK1-209ENST00000520953 PROSER3Q2NL68 480 aa19.27■□□□□ 0.68
SREK1-209ENST00000520953 SLC4A9Q96Q91 983 aa19.27■□□□□ 0.68
SREK1-209ENST00000520953 CRBNQ96SW2 442 aa19.27■□□□□ 0.68
SREK1-209ENST00000520953 CHPF2Q9P2E5 772 aa19.27■□□□□ 0.68
SREK1-209ENST00000520953 EXOC6Q8TAG9 804 aa19.27■□□□□ 0.68
SREK1-209ENST00000520953 RXRBP28702 533 aa19.26■□□□□ 0.67
SREK1-209ENST00000520953 CCDC30Q5VVM6 783 aa19.26■□□□□ 0.67
SREK1-209ENST00000520953 HOXB7P09629 217 aa19.25■□□□□ 0.67
SREK1-209ENST00000520953 SNRPA1P09661 255 aaKnown RBP19.25■□□□□ 0.67
SREK1-209ENST00000520953 BRPF1P55201 1214 aaPredicted RBP19.25■□□□□ 0.67
SREK1-209ENST00000520953 ZKSCAN2Q63HK3 967 aa19.25■□□□□ 0.67
SREK1-209ENST00000520953 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.25■□□□□ 0.67
SREK1-209ENST00000520953 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms