RNA–Protein interactions for RNA: ENST00000520143.1

IGHV3-57-201, Transcript of immunoglobulin heavy variable 3-57 (pseudogene), humanhuman

BASIC

Gene IGHV3-57, Length 280 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-57-201ENST00000520143 CHL1O00533 1208 aa8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 TCERG1O14776 1098 aaKnown RBP8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 IRX5P78411 483 aaPredicted RBP8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 PANK1Q8TE04 598 aa8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 THUMPD2Q9BTF0 503 aaKnown RBP8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 CRB1P82279 1406 aa8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 NCAPD2Q15021 1401 aa8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 MED1Q15648 1581 aaPredicted RBP8.51□□□□□ -1.05
IGHV3-57-201ENST00000520143 COL18A1P39060 1754 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 LMO7Q8WWI1 1683 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 FAM208AQ9UK61 1670 aaKnown RBP8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 FAM83GA6ND36 823 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 XPCQ01831 940 aaPredicted RBP8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 DCTN1Q14203 1278 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 MVPQ14764 893 aaKnown RBP8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 TNS3Q68CZ2 1445 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 ATF7IPQ6VMQ6 1270 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 ARHGAP45Q92619 1136 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 BCL2L13Q9BXK5 485 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 OCEL1Q9H607 264 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 BABAM1Q9NWV8 329 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 COG6Q9Y2V7 657 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 PXDNQ92626 1479 aa8.5□□□□□ -1.05
IGHV3-57-201ENST00000520143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 POTEJP0CG39 1038 aa8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 RLBP1P12271 317 aa8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 TWISTNBQ3B726 338 aaPredicted RBP8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 LMOD2Q6P5Q4 547 aa8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 FTSJ3Q8IY81 847 aaKnown RBP8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 MRPL50Q8N5N7 158 aaKnown RBP8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 OTUD5Q96G74 571 aa8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 LTV1Q96GA3 475 aaPredicted RBP8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 ZFP91Q96JP5 570 aaPredicted RBP8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 TAOK2Q9UL54 1235 aa8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 NOB1Q9ULX3 412 aaKnown RBP8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 RBM19Q9Y4C8 960 aaKnown RBP8.49□□□□□ -1.05
IGHV3-57-201ENST00000520143 MAP3K5Q99683 1374 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 RGL2O15211 777 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 TRIM27P14373 513 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 NBPF6Q5VWK0 638 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 MCM10Q7L590 875 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 TSPYL6Q8N831 410 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 C8orf58Q8NAV2 365 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 NBPF4Q96M43 638 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 DDX19BQ9UMR2 479 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 SOS1Q07889 1333 aaPredicted RBP8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 SPATA31A3Q5VYP0 1347 aa8.48□□□□□ -1.05
IGHV3-57-201ENST00000520143 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 MAMSTRQ6ZN01 415 aa8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 CHMP4BQ9H444 224 aaKnown RBP8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 TNNQ9UQP3 1299 aa8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 ZNF335Q9H4Z2 1342 aaPredicted RBP8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 NHSL1Q5SYE7 1610 aa8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 PLEKHG2Q9H7P9 1386 aa8.47□□□□□ -1.05
IGHV3-57-201ENST00000520143 KDM3BQ7LBC6 1761 aa8.46□□□□□ -1.05
IGHV3-57-201ENST00000520143 ZBTB7CA1YPR0 619 aa8.46□□□□□ -1.06
IGHV3-57-201ENST00000520143 PLEKHO1Q53GL0 409 aaPredicted RBP8.46□□□□□ -1.06
IGHV3-57-201ENST00000520143 BRINP3Q76B58 766 aa8.46□□□□□ -1.06
IGHV3-57-201ENST00000520143 API5Q9BZZ5 524 aaKnown RBP8.46□□□□□ -1.06
IGHV3-57-201ENST00000520143 SLAIN2Q9P270 581 aa8.46□□□□□ -1.06
IGHV3-57-201ENST00000520143 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.06
IGHV3-57-201ENST00000520143 CPDO75976 1380 aa8.46□□□□□ -1.06
IGHV3-57-201ENST00000520143 OVOS2A0A0G2JMS6 1433 aa8.46□□□□□ -1.06
IGHV3-57-201ENST00000520143 TAF7Q15545 349 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 USHBP1Q8N6Y0 703 aa8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 IL17REQ8NFR9 667 aa8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 RWDD1Q9H446 243 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 SCUBE2Q9NQ36 999 aa8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 TSPYL4Q9UJ04 414 aa8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 ADAMTS7Q9UKP4 1686 aa8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 CEMIPQ8WUJ3 1361 aa8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 SIPA1L3O60292 1781 aaPredicted RBP8.45□□□□□ -1.06
IGHV3-57-201ENST00000520143 ABCA3Q99758 1704 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 ELL2O00472 640 aaPredicted RBP8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 ITPRIPQ8IWB1 547 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 TMEM57Q8N5G2 664 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 EFCAB3Q8N7B9 438 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 DDX17Q92841 729 aaKnown RBP8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 LRRC59Q96AG4 307 aaKnown RBP8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 AXIN2Q9Y2T1 843 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 PCDHB15Q9Y5E8 787 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 ABCC4O15439 1325 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 ERBB3P21860 1342 aa8.44□□□□□ -1.06
IGHV3-57-201ENST00000520143 SCN11AQ9UI33 1791 aa8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 IGHDP01880 384 aa8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 ZC3H6P61129 1189 aaKnown RBP8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 HDAC1Q13547 482 aaPredicted RBP8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 PDCD7Q8N8D1 485 aaKnown RBP8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 CHMP4AQ9BY43 222 aa8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 ZBTB40Q9NUA8 1239 aa8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 PTPRCP08575 1304 aa8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 N4BP2Q86UW6 1770 aaPredicted RBP8.43□□□□□ -1.06
IGHV3-57-201ENST00000520143 ZNF530Q6P9A1 599 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms