RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 LMO7Q8WWI1 1683 aa4.09□□□□□ -1.76
MCF2-208ENST00000519895 SLIT3O75094 1523 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 POTEIP0CG38 1075 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 HPS5Q9UPZ3 1129 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 TRPM3Q9HCF6 1732 aaPredicted RBP4.08□□□□□ -1.76
MCF2-208ENST00000519895 TMEM132AQ24JP5 1023 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 KIAA0232Q92628 1395 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 TRPM7Q96QT4 1865 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 RPTORQ8N122 1335 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 PAPPA2Q9BXP8 1791 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 GLTPD2A6NH11 291 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 COL9A2Q14055 689 aaPredicted RBP4.08□□□□□ -1.76
MCF2-208ENST00000519895 KLHL34Q8N239 644 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 STAG3Q9UJ98 1225 aa4.08□□□□□ -1.76
MCF2-208ENST00000519895 BAHCC1Q9P281 2608 aa4.07□□□□□ -1.76
MCF2-208ENST00000519895 C9orf131Q5VYM1 1079 aa4.07□□□□□ -1.76
MCF2-208ENST00000519895 MTMR10Q9NXD2 777 aa4.07□□□□□ -1.76
MCF2-208ENST00000519895 ALS2Q96Q42 1657 aa4.07□□□□□ -1.76
MCF2-208ENST00000519895 POLR3AO14802 1390 aaPredicted RBP4.07□□□□□ -1.76
MCF2-208ENST00000519895 MON2Q7Z3U7 1717 aa4.07□□□□□ -1.76
MCF2-208ENST00000519895 DICER1Q9UPY3 1922 aaKnown RBP4.07□□□□□ -1.76
MCF2-208ENST00000519895 KRT28Q7Z3Y7 464 aa4.07□□□□□ -1.76
MCF2-208ENST00000519895 METP08581 1390 aa4.07□□□□□ -1.76
MCF2-208ENST00000519895 PNPLA7Q6ZV29 1317 aa4.07□□□□□ -1.76
MCF2-208ENST00000519895 SLC27A3Q5K4L6 730 aa4.06□□□□□ -1.76
MCF2-208ENST00000519895 AMOTL2Q9Y2J4 779 aa4.06□□□□□ -1.76
MCF2-208ENST00000519895 TJAP1Q5JTD0 557 aa4.06□□□□□ -1.76
MCF2-208ENST00000519895 NSD3Q9BZ95 1437 aa4.06□□□□□ -1.76
MCF2-208ENST00000519895 TGFB2P61812 414 aa4.05□□□□□ -1.76
MCF2-208ENST00000519895 NOM1Q5C9Z4 860 aaKnown RBP4.05□□□□□ -1.76
MCF2-208ENST00000519895 PAXIP1Q6ZW49 1069 aaPredicted RBP4.05□□□□□ -1.76
MCF2-208ENST00000519895 LDHDQ86WU2 507 aa4.05□□□□□ -1.76
MCF2-208ENST00000519895 LY75O60449 1722 aa4.05□□□□□ -1.76
MCF2-208ENST00000519895 PLEKHG3A1L390 1219 aa4.05□□□□□ -1.76
MCF2-208ENST00000519895 ADGRF5Q8IZF2 1346 aa4.05□□□□□ -1.76
MCF2-208ENST00000519895 KIF24Q5T7B8 1368 aa4.05□□□□□ -1.76
MCF2-208ENST00000519895 ROBO2Q9HCK4 1378 aa4.05□□□□□ -1.76
MCF2-208ENST00000519895 FAM208AQ9UK61 1670 aaKnown RBP4.05□□□□□ -1.76
MCF2-208ENST00000519895 RBM27Q9P2N5 1060 aaKnown RBP4.05□□□□□ -1.76
MCF2-208ENST00000519895 SSC5DA1L4H1 1573 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 ANKRD26Q9UPS8 1709 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 USP31Q70CQ4 1352 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 NPC1L1Q9UHC9 1359 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 KRT37O76014 449 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 TSHZ2Q9NRE2 1034 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 BTG4Q9NY30 223 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 SPDYE2BA6NHP3 402 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 SPDYE6P0CI01 402 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 SPDYE2Q495Y8 402 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 CDCA8Q53HL2 280 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 IFNLR1Q8IU57 520 aaPredicted RBP4.04□□□□□ -1.76
MCF2-208ENST00000519895 TONSLQ96HA7 1378 aa4.04□□□□□ -1.76
MCF2-208ENST00000519895 CPSF1Q10570 1443 aaKnown RBP4.03□□□□□ -1.76
MCF2-208ENST00000519895 FLAD1Q8NFF5 587 aa4.03□□□□□ -1.76
MCF2-208ENST00000519895 CAPNS2Q96L46 248 aa4.03□□□□□ -1.76
MCF2-208ENST00000519895 PODXL2Q9NZ53 605 aa4.03□□□□□ -1.76
MCF2-208ENST00000519895 KMT2BQ9UMN6 2715 aaPredicted RBP4.03□□□□□ -1.76
MCF2-208ENST00000519895 PSME1Q06323 249 aa4.03□□□□□ -1.76
MCF2-208ENST00000519895 LURAP1LQ8IV03 231 aa4.03□□□□□ -1.76
MCF2-208ENST00000519895 GPR101Q96P66 508 aaPredicted RBP4.03□□□□□ -1.76
MCF2-208ENST00000519895 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.03□□□□□ -1.76
MCF2-208ENST00000519895 BTAF1O14981 1849 aa4.03□□□□□ -1.76
MCF2-208ENST00000519895 ITGBL1O95965 494 aaPredicted RBP4.03□□□□□ -1.76
MCF2-208ENST00000519895 ZNF326Q5BKZ1 582 aaKnown RBP4.03□□□□□ -1.76
MCF2-208ENST00000519895 CCDC24Q8N4L8 307 aa4.03□□□□□ -1.76
MCF2-208ENST00000519895 ROCK2O75116 1388 aaKnown RBP4.03□□□□□ -1.77
MCF2-208ENST00000519895 NSD2O96028 1365 aa4.03□□□□□ -1.77
MCF2-208ENST00000519895 BMP8BP34820 402 aa4.02□□□□□ -1.77
MCF2-208ENST00000519895 ZEB1P37275 1124 aaPredicted RBP4.02□□□□□ -1.77
MCF2-208ENST00000519895 ZNF827Q17R98 1081 aa4.02□□□□□ -1.77
MCF2-208ENST00000519895 FBXO46Q6PJ61 603 aaPredicted RBP4.02□□□□□ -1.77
MCF2-208ENST00000519895 DEFB123Q8N688 67 aa4.02□□□□□ -1.77
MCF2-208ENST00000519895 ORAI2Q96SN7 254 aa4.02□□□□□ -1.77
MCF2-208ENST00000519895 TTC21AQ8NDW8 1320 aa4.02□□□□□ -1.77
MCF2-208ENST00000519895 ITGAEP38570 1179 aa4.02□□□□□ -1.77
MCF2-208ENST00000519895 ZNF692Q9BU19 519 aaPredicted RBP4.02□□□□□ -1.77
MCF2-208ENST00000519895 CPDO75976 1380 aa4.02□□□□□ -1.77
MCF2-208ENST00000519895 POTECB2RU33 542 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 CAPN2P17655 700 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 LRIT3Q3SXY7 679 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 AKAP4Q5JQC9 854 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 L3MBTL2Q969R5 705 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 PRR36Q9H6K5 1346 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 CENPJQ9HC77 1338 aaPredicted RBP4.01□□□□□ -1.77
MCF2-208ENST00000519895 H0YGN5 161 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 WASLO00401 505 aaPredicted RBP4.01□□□□□ -1.77
MCF2-208ENST00000519895 TCP11L2Q8N4U5 519 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 WASHC2AQ641Q2 1341 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 EVC2Q86UK5 1308 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 AKAP11Q9UKA4 1901 aa4.01□□□□□ -1.77
MCF2-208ENST00000519895 ZNF579Q8NAF0 562 aaKnown RBP4.01□□□□□ -1.77
MCF2-208ENST00000519895 EDC4Q6P2E9 1401 aaKnown RBP4□□□□□ -1.77
MCF2-208ENST00000519895 GPR37L1O60883 481 aa4□□□□□ -1.77
MCF2-208ENST00000519895 VASPP50552 380 aaPredicted RBP4□□□□□ -1.77
MCF2-208ENST00000519895 KIF20BQ96Q89 1820 aa4□□□□□ -1.77
MCF2-208ENST00000519895 ARHGAP27Q6ZUM4 889 aa4□□□□□ -1.77
MCF2-208ENST00000519895 DCAF11Q8TEB1 546 aa4□□□□□ -1.77
MCF2-208ENST00000519895 DCAF5Q96JK2 942 aa4□□□□□ -1.77
MCF2-208ENST00000519895 RTL1A6NKG5 1358 aa4□□□□□ -1.77
MCF2-208ENST00000519895 KTN1Q86UP2 1357 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms