RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 GDPD2Q9HCC8 539 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 COG6Q9Y2V7 657 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 BCORL1Q5H9F3 1711 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 ARHGEF12Q9NZN5 1544 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 APBB1O00213 710 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 NR3C2P08235 984 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 GRM5P41594 1212 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 ABL2P42684 1182 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 ARID5BQ14865 1188 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 FAM174AQ8TBP5 190 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 CHIC2Q9UKJ5 165 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 C9orf84Q5VXU9 1444 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 MYO5CQ9NQX4 1742 aa6.47□□□□□ -1.37
PABPC1-212ENST00000519622 TONSLQ96HA7 1378 aa6.46□□□□□ -1.37
PABPC1-212ENST00000519622 SYCP2Q9BX26 1530 aa6.46□□□□□ -1.37
PABPC1-212ENST00000519622 ADH1CP00326 375 aa6.46□□□□□ -1.38
PABPC1-212ENST00000519622 KDM5CP41229 1560 aa6.46□□□□□ -1.38
PABPC1-212ENST00000519622 WDR4P57081 412 aaKnown RBP6.46□□□□□ -1.38
PABPC1-212ENST00000519622 AGERQ15109 404 aa6.46□□□□□ -1.38
PABPC1-212ENST00000519622 C14orf37Q86TY3 774 aa6.46□□□□□ -1.38
PABPC1-212ENST00000519622 MPHOSPH9Q99550 1183 aa6.46□□□□□ -1.38
PABPC1-212ENST00000519622 FKBPLQ9UIM3 349 aa6.46□□□□□ -1.38
PABPC1-212ENST00000519622 KIAA1107Q9UPP5 1409 aa6.46□□□□□ -1.38
PABPC1-212ENST00000519622 ABCC1P33527 1531 aa6.45□□□□□ -1.38
PABPC1-212ENST00000519622 CENPBP07199 599 aaPredicted RBP6.45□□□□□ -1.38
PABPC1-212ENST00000519622 VEGFBP49765 207 aa6.45□□□□□ -1.38
PABPC1-212ENST00000519622 NBPF8Q3BBV2 869 aa6.45□□□□□ -1.38
PABPC1-212ENST00000519622 SH3RF1Q7Z6J0 888 aa6.45□□□□□ -1.38
PABPC1-212ENST00000519622 ITPKCQ96DU7 683 aa6.45□□□□□ -1.38
PABPC1-212ENST00000519622 ZFAND3Q9H8U3 227 aa6.45□□□□□ -1.38
PABPC1-212ENST00000519622 IQGAP3Q86VI3 1631 aa6.45□□□□□ -1.38
PABPC1-212ENST00000519622 CCDC141Q6ZP82 1450 aa6.45□□□□□ -1.38
PABPC1-212ENST00000519622 UHRF1BP1Q6BDS2 1440 aa6.44□□□□□ -1.38
PABPC1-212ENST00000519622 SOBPA7XYQ1 873 aa6.44□□□□□ -1.38
PABPC1-212ENST00000519622 WIPF1O43516 503 aa6.44□□□□□ -1.38
PABPC1-212ENST00000519622 IRF5Q13568 498 aa6.44□□□□□ -1.38
PABPC1-212ENST00000519622 NBPF14Q5TI25 921 aa6.44□□□□□ -1.38
PABPC1-212ENST00000519622 MRPL14Q6P1L8 145 aaKnown RBP6.44□□□□□ -1.38
PABPC1-212ENST00000519622 BPHLQ86WA6 291 aaPredicted RBP6.44□□□□□ -1.38
PABPC1-212ENST00000519622 PURBQ96QR8 312 aaKnown RBP6.44□□□□□ -1.38
PABPC1-212ENST00000519622 PLA2R1Q13018 1463 aa6.44□□□□□ -1.38
PABPC1-212ENST00000519622 E9PCH4 1651 aa6.44□□□□□ -1.38
PABPC1-212ENST00000519622 ABCA9Q8IUA7 1624 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 ANKRD50Q9ULJ7 1429 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 RALGAPBQ86X10 1494 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 RAD21O60216 631 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 SH3BP5LQ7L8J4 393 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 PNMA1Q8ND90 353 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 ARMC2Q8NEN0 867 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 L3MBTL2Q969R5 705 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 YTHDC1Q96MU7 727 aaKnown RBP6.43□□□□□ -1.38
PABPC1-212ENST00000519622 C1QTNF2Q9BXJ5 285 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 PRM3Q9NNZ6 103 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 NXF1Q9UBU9 619 aaKnown RBP6.43□□□□□ -1.38
PABPC1-212ENST00000519622 ARAP3Q8WWN8 1544 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 WASHC2AQ641Q2 1341 aa6.43□□□□□ -1.38
PABPC1-212ENST00000519622 FAM135AQ9P2D6 1515 aa6.42□□□□□ -1.38
PABPC1-212ENST00000519622 ZIC2O95409 532 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-212ENST00000519622 OCSTAMPQ9BR26 566 aa6.42□□□□□ -1.38
PABPC1-212ENST00000519622 HIRIP3Q9BW71 556 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-212ENST00000519622 CARD14Q9BXL6 1004 aa6.42□□□□□ -1.38
PABPC1-212ENST00000519622 CFDP1Q9UEE9 299 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-212ENST00000519622 INO80Q9ULG1 1556 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-212ENST00000519622 ZC3H4Q9UPT8 1303 aaKnown RBP6.42□□□□□ -1.38
PABPC1-212ENST00000519622 DEPDC5O75140 1603 aa6.42□□□□□ -1.38
PABPC1-212ENST00000519622 ANKRD30AQ9BXX3 1397 aa6.42□□□□□ -1.38
PABPC1-212ENST00000519622 CNTLNQ9NXG0 1405 aa6.42□□□□□ -1.38
PABPC1-212ENST00000519622 ZFYVE16Q7Z3T8 1539 aa6.41□□□□□ -1.38
PABPC1-212ENST00000519622 TRPM1Q7Z4N2 1603 aa6.41□□□□□ -1.38
PABPC1-212ENST00000519622 MROH1Q8NDA8 1641 aa6.41□□□□□ -1.38
PABPC1-212ENST00000519622 RNF17Q9BXT8 1623 aaKnown RBP6.41□□□□□ -1.38
PABPC1-212ENST00000519622 MAGEB6P1A0A0J9YX57 407 aa6.41□□□□□ -1.38
PABPC1-212ENST00000519622 FBXO45P0C2W1 286 aa6.41□□□□□ -1.38
PABPC1-212ENST00000519622 HSPA5P11021 654 aaKnown RBP6.41□□□□□ -1.38
PABPC1-212ENST00000519622 DDX10Q13206 875 aaKnown RBP6.41□□□□□ -1.38
PABPC1-212ENST00000519622 NR5A1Q13285 461 aa6.41□□□□□ -1.38
PABPC1-212ENST00000519622 PROSER2Q86WR7 435 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-212ENST00000519622 GPKOWQ92917 476 aaPredicted RBP eCLIP6.41□□□□□ -1.38
PABPC1-212ENST00000519622 CDK11AQ9UQ88 783 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-212ENST00000519622 KIF15Q9NS87 1388 aa6.41□□□□□ -1.38
PABPC1-212ENST00000519622 VWDEQ8N2E2 1590 aa6.4□□□□□ -1.38
PABPC1-212ENST00000519622 LAMC1P11047 1609 aa6.4□□□□□ -1.38
PABPC1-212ENST00000519622 VAC14Q08AM6 782 aa6.4□□□□□ -1.38
PABPC1-212ENST00000519622 PDXDC2PQ6P474 469 aa6.4□□□□□ -1.38
PABPC1-212ENST00000519622 ARHGAP9Q9BRR9 750 aa6.4□□□□□ -1.38
PABPC1-212ENST00000519622 ERBB4Q15303 1308 aa6.4□□□□□ -1.39
PABPC1-212ENST00000519622 CCDC7Q96M83 1385 aa6.4□□□□□ -1.39
PABPC1-212ENST00000519622 ARHGAP5Q13017 1502 aa6.4□□□□□ -1.39
PABPC1-212ENST00000519622 A6NJR5 290 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 ZBBXA8MT70 800 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 FSHRP23945 695 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 GMPRP36959 345 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 PTK2Q05397 1052 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 SCARF1Q14162 830 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 C6orf118Q5T5N4 469 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 FNBP4Q8N3X1 1017 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-212ENST00000519622 ZMYND15Q9H091 742 aa6.39□□□□□ -1.39
PABPC1-212ENST00000519622 DHX29Q7Z478 1369 aaKnown RBP6.39□□□□□ -1.39
PABPC1-212ENST00000519622 PLCH2O75038 1416 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms