RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 PLCB2Q00722 1185 aa12.83□□□□□ -0.36
MCPH1-203ENST00000519480 AKAP4Q5JQC9 854 aa12.83□□□□□ -0.36
MCPH1-203ENST00000519480 NOB1Q9ULX3 412 aaKnown RBP12.83□□□□□ -0.36
MCPH1-203ENST00000519480 VIRMAQ69YN4 1812 aaKnown RBP12.82□□□□□ -0.36
MCPH1-203ENST00000519480 RNMTO43148 476 aaKnown RBP12.82□□□□□ -0.36
MCPH1-203ENST00000519480 TEFQ10587 303 aa12.82□□□□□ -0.36
MCPH1-203ENST00000519480 DDX54Q8TDD1 881 aaKnown RBP12.82□□□□□ -0.36
MCPH1-203ENST00000519480 KAT6BQ8WYB5 2073 aa12.82□□□□□ -0.36
MCPH1-203ENST00000519480 CYP27B1O15528 508 aa12.82□□□□□ -0.36
MCPH1-203ENST00000519480 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
MCPH1-203ENST00000519480 HTATSF1O43719 755 aaKnown RBP12.81□□□□□ -0.36
MCPH1-203ENST00000519480 PHKG2P15735 406 aa12.8□□□□□ -0.36
MCPH1-203ENST00000519480 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
MCPH1-203ENST00000519480 CARD10Q9BWT7 1032 aa12.8□□□□□ -0.36
MCPH1-203ENST00000519480 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
MCPH1-203ENST00000519480 BTBD11A6QL63 1104 aa12.79□□□□□ -0.36
MCPH1-203ENST00000519480 SLC39A6Q13433 755 aa12.79□□□□□ -0.36
MCPH1-203ENST00000519480 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
MCPH1-203ENST00000519480 CCDC9Q9Y3X0 531 aaKnown RBP12.79□□□□□ -0.36
MCPH1-203ENST00000519480 TRIM27P14373 513 aa12.79□□□□□ -0.36
MCPH1-203ENST00000519480 IL2RBP14784 551 aa12.79□□□□□ -0.36
MCPH1-203ENST00000519480 HSPA1LP34931 641 aa12.79□□□□□ -0.36
MCPH1-203ENST00000519480 DEKP35659 375 aaKnown RBP12.79□□□□□ -0.36
MCPH1-203ENST00000519480 CEMIPQ8WUJ3 1361 aa12.79□□□□□ -0.36
MCPH1-203ENST00000519480 LRRC37A3O60309 1634 aa12.79□□□□□ -0.36
MCPH1-203ENST00000519480 CT47B1P0C2W7 299 aaPredicted RBP12.78□□□□□ -0.36
MCPH1-203ENST00000519480 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
MCPH1-203ENST00000519480 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
MCPH1-203ENST00000519480 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
MCPH1-203ENST00000519480 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
MCPH1-203ENST00000519480 ABCC6O95255 1503 aa12.78□□□□□ -0.36
MCPH1-203ENST00000519480 ERICH6BQ5W0A0 696 aa12.78□□□□□ -0.36
MCPH1-203ENST00000519480 IFNL2Q8IZJ0 200 aa12.78□□□□□ -0.36
MCPH1-203ENST00000519480 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
MCPH1-203ENST00000519480 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
MCPH1-203ENST00000519480 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.36
MCPH1-203ENST00000519480 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.37
MCPH1-203ENST00000519480 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.37
MCPH1-203ENST00000519480 OVOS2A0A0G2JMS6 1433 aa12.77□□□□□ -0.37
MCPH1-203ENST00000519480 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
MCPH1-203ENST00000519480 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
MCPH1-203ENST00000519480 ALDH1L2Q3SY69 923 aa12.76□□□□□ -0.37
MCPH1-203ENST00000519480 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
MCPH1-203ENST00000519480 PLCH1Q4KWH8 1693 aa12.75□□□□□ -0.37
MCPH1-203ENST00000519480 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
MCPH1-203ENST00000519480 G2E3Q7L622 706 aa12.75□□□□□ -0.37
MCPH1-203ENST00000519480 ITPRIPQ8IWB1 547 aa12.75□□□□□ -0.37
MCPH1-203ENST00000519480 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
MCPH1-203ENST00000519480 ANXA1P04083 346 aa12.75□□□□□ -0.37
MCPH1-203ENST00000519480 PDE3AQ14432 1141 aa12.75□□□□□ -0.37
MCPH1-203ENST00000519480 TMEM57Q8N5G2 664 aa12.75□□□□□ -0.37
MCPH1-203ENST00000519480 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
MCPH1-203ENST00000519480 EIF4A1P60842 406 aaKnown RBP12.74□□□□□ -0.37
MCPH1-203ENST00000519480 ZMYND15Q9H091 742 aa12.74□□□□□ -0.37
MCPH1-203ENST00000519480 KIF16BQ96L93 1317 aa12.74□□□□□ -0.37
MCPH1-203ENST00000519480 A0A0G2JS52 829 aa12.74□□□□□ -0.37
MCPH1-203ENST00000519480 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
MCPH1-203ENST00000519480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■■□□ 17.7
MCPH1-203ENST00000519480 JCADQ9P266 1359 aa12.74□□□□□ -0.37
MCPH1-203ENST00000519480 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
MCPH1-203ENST00000519480 SCN11AQ9UI33 1791 aa12.73□□□□□ -0.37
MCPH1-203ENST00000519480 PARP4Q9UKK3 1724 aaKnown RBP12.73□□□□□ -0.37
MCPH1-203ENST00000519480 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
MCPH1-203ENST00000519480 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
MCPH1-203ENST00000519480 CABP4P57796 275 aa12.72□□□□□ -0.37
MCPH1-203ENST00000519480 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
MCPH1-203ENST00000519480 F6X3S4 739 aa12.72□□□□□ -0.37
MCPH1-203ENST00000519480 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
MCPH1-203ENST00000519480 HDGFL1Q5TGJ6 251 aa12.72□□□□□ -0.37
MCPH1-203ENST00000519480 MVPQ14764 893 aaKnown RBP12.72□□□□□ -0.37
MCPH1-203ENST00000519480 LRP6O75581 1613 aa12.71□□□□□ -0.37
MCPH1-203ENST00000519480 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.37
MCPH1-203ENST00000519480 PIP4K2AP48426 406 aaPredicted RBP12.71□□□□□ -0.37
MCPH1-203ENST00000519480 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
MCPH1-203ENST00000519480 SHANK3Q9BYB0 1731 aa12.71□□□□□ -0.37
MCPH1-203ENST00000519480 MEX3CQ5U5Q3 659 aaKnown RBP12.71□□□□□ -0.38
MCPH1-203ENST00000519480 ZNF790Q6PG37 636 aa12.71□□□□□ -0.38
MCPH1-203ENST00000519480 SIPA1L3O60292 1781 aaPredicted RBP12.7□□□□□ -0.38
MCPH1-203ENST00000519480 STK31Q9BXU1 1019 aa12.7□□□□□ -0.38
MCPH1-203ENST00000519480 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
MCPH1-203ENST00000519480 SPATA31A1Q5TZJ5 1347 aa12.7□□□□□ -0.38
MCPH1-203ENST00000519480 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
MCPH1-203ENST00000519480 SYTL4Q96C24 671 aaPredicted RBP12.7□□□□□ -0.38
MCPH1-203ENST00000519480 ZNF496Q96IT1 587 aaPredicted RBP12.7□□□□□ -0.38
MCPH1-203ENST00000519480 C1orf115Q9H7X2 142 aa12.7□□□□□ -0.38
MCPH1-203ENST00000519480 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
MCPH1-203ENST00000519480 NRAPQ86VF7 1730 aa12.69□□□□□ -0.38
MCPH1-203ENST00000519480 FAM98CQ17RN3 349 aaKnown RBP12.69□□□□□ -0.38
MCPH1-203ENST00000519480 PCDHB15Q9Y5E8 787 aa12.69□□□□□ -0.38
MCPH1-203ENST00000519480 NWD2Q9ULI1 1742 aa12.69□□□□□ -0.38
MCPH1-203ENST00000519480 EXOC5O00471 708 aa12.69□□□□□ -0.38
MCPH1-203ENST00000519480 CCDC30Q5VVM6 783 aa12.69□□□□□ -0.38
MCPH1-203ENST00000519480 NAP1L5Q96NT1 182 aaPredicted RBP12.69□□□□□ -0.38
MCPH1-203ENST00000519480 PTCD1O75127 700 aaKnown RBP12.68□□□□□ -0.38
MCPH1-203ENST00000519480 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
MCPH1-203ENST00000519480 PROSER3Q2NL68 480 aa12.68□□□□□ -0.38
MCPH1-203ENST00000519480 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
MCPH1-203ENST00000519480 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
MCPH1-203ENST00000519480 IGHDP01880 384 aa12.68□□□□□ -0.38
MCPH1-203ENST00000519480 UNC5CLQ8IV45 518 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms