RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 HDGFP51858 240 aaKnown RBP20.28■□□□□ 0.84
PCDHGA11-202ENST00000518882 RBSNQ9H1K0 784 aa20.28■□□□□ 0.84
PCDHGA11-202ENST00000518882 NEK4P51957 841 aa20.27■□□□□ 0.84
PCDHGA11-202ENST00000518882 PRIM1P49642 420 aaKnown RBP20.27■□□□□ 0.83
PCDHGA11-202ENST00000518882 TNRQ92752 1358 aa20.26■□□□□ 0.83
PCDHGA11-202ENST00000518882 PNMA6EA0A0J9YXQ4 647 aa20.26■□□□□ 0.83
PCDHGA11-202ENST00000518882 FOXD4L5Q5VV16 416 aaPredicted RBP20.26■□□□□ 0.83
PCDHGA11-202ENST00000518882 FOXD4L4Q8WXT5 416 aaPredicted RBP20.26■□□□□ 0.83
PCDHGA11-202ENST00000518882 TMX3Q96JJ7 454 aa20.26■□□□□ 0.83
PCDHGA11-202ENST00000518882 ESYT1Q9BSJ8 1104 aa20.26■□□□□ 0.83
PCDHGA11-202ENST00000518882 KDRP35968 1356 aa20.26■□□□□ 0.83
PCDHGA11-202ENST00000518882 ZSCAN30Q86W11 494 aa20.25■□□□□ 0.83
PCDHGA11-202ENST00000518882 ANP32BQ92688 251 aaKnown RBP20.25■□□□□ 0.83
PCDHGA11-202ENST00000518882 ESF1Q9H501 851 aaKnown RBP20.25■□□□□ 0.83
PCDHGA11-202ENST00000518882 PALD1Q9ULE6 856 aa20.25■□□□□ 0.83
PCDHGA11-202ENST00000518882 NSFL1CQ9UNZ2 370 aaKnown RBP20.25■□□□□ 0.83
PCDHGA11-202ENST00000518882 RGPD8O14715 1765 aaPredicted RBP20.25■□□□□ 0.83
PCDHGA11-202ENST00000518882 LRRC37A3O60309 1634 aa20.25■□□□□ 0.83
PCDHGA11-202ENST00000518882 EYA1Q99502 592 aa20.24■□□□□ 0.83
PCDHGA11-202ENST00000518882 LRRCC1Q9C099 1032 aa20.24■□□□□ 0.83
PCDHGA11-202ENST00000518882 TMEM63CQ9P1W3 806 aa20.24■□□□□ 0.83
PCDHGA11-202ENST00000518882 MX1P20591 662 aa20.23■□□□□ 0.83
PCDHGA11-202ENST00000518882 FLIIQ13045 1269 aa20.23■□□□□ 0.83
PCDHGA11-202ENST00000518882 NECTIN2Q92692 538 aa20.23■□□□□ 0.83
PCDHGA11-202ENST00000518882 SBNO1A3KN83 1393 aa20.23■□□□□ 0.83
PCDHGA11-202ENST00000518882 FLT4P35916 1363 aa20.23■□□□□ 0.83
PCDHGA11-202ENST00000518882 LTKP29376 864 aa20.23■□□□□ 0.83
PCDHGA11-202ENST00000518882 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
PCDHGA11-202ENST00000518882 PTPRUQ92729 1446 aa20.22■□□□□ 0.83
PCDHGA11-202ENST00000518882 CACNA1FO60840 1977 aa20.22■□□□□ 0.83
PCDHGA11-202ENST00000518882 FKBP5Q13451 457 aaPredicted RBP20.22■□□□□ 0.83
PCDHGA11-202ENST00000518882 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
PCDHGA11-202ENST00000518882 N4BP2Q86UW6 1770 aaPredicted RBP20.22■□□□□ 0.83
PCDHGA11-202ENST00000518882 CHMLP26374 656 aa20.22■□□□□ 0.83
PCDHGA11-202ENST00000518882 ATP8B2P98198 1209 aa20.21■□□□□ 0.83
PCDHGA11-202ENST00000518882 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
PCDHGA11-202ENST00000518882 RILPL2Q969X0 211 aa20.21■□□□□ 0.83
PCDHGA11-202ENST00000518882 PIK3C2AO00443 1686 aa20.2■□□□□ 0.82
PCDHGA11-202ENST00000518882 TRIM6-TRIM34B2RNG4 842 aa20.2■□□□□ 0.82
PCDHGA11-202ENST00000518882 NOL8Q76FK4 1167 aaKnown RBP20.2■□□□□ 0.82
PCDHGA11-202ENST00000518882 PDLIM2Q96JY6 352 aa20.2■□□□□ 0.82
PCDHGA11-202ENST00000518882 ANO2Q9NQ90 1003 aa20.2■□□□□ 0.82
PCDHGA11-202ENST00000518882 GNAI3P08754 354 aa20.19■□□□□ 0.82
PCDHGA11-202ENST00000518882 CUL4AQ13619 759 aa20.19■□□□□ 0.82
PCDHGA11-202ENST00000518882 SLC26A8Q96RN1 970 aa20.19■□□□□ 0.82
PCDHGA11-202ENST00000518882 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
PCDHGA11-202ENST00000518882 SYCE3A1L190 88 aa20.19■□□□□ 0.82
PCDHGA11-202ENST00000518882 BRD1O95696 1058 aa20.19■□□□□ 0.82
PCDHGA11-202ENST00000518882 IL25Q9H293 177 aa20.19■□□□□ 0.82
PCDHGA11-202ENST00000518882 LRRFIP2Q9Y608 721 aaKnown RBP20.19■□□□□ 0.82
PCDHGA11-202ENST00000518882 AMPHP49418 695 aa20.18■□□□□ 0.82
PCDHGA11-202ENST00000518882 CCDC30Q5VVM6 783 aa20.18■□□□□ 0.82
PCDHGA11-202ENST00000518882 PLEKHG1Q9ULL1 1385 aa20.18■□□□□ 0.82
PCDHGA11-202ENST00000518882 LRSAM1Q6UWE0 723 aa20.18■□□□□ 0.82
PCDHGA11-202ENST00000518882 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
PCDHGA11-202ENST00000518882 MSNP26038 577 aaKnown RBP20.17■□□□□ 0.82
PCDHGA11-202ENST00000518882 MCM2P49736 904 aa20.17■□□□□ 0.82
PCDHGA11-202ENST00000518882 TCHHQ07283 1943 aa20.17■□□□□ 0.82
PCDHGA11-202ENST00000518882 KIAA1211Q6ZU35 1233 aa20.16■□□□□ 0.82
PCDHGA11-202ENST00000518882 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.16■□□□□ 0.82
PCDHGA11-202ENST00000518882 ANAPC15P60006 121 aa20.16■□□□□ 0.82
PCDHGA11-202ENST00000518882 UPF3BQ9BZI7 483 aaKnown RBP20.16■□□□□ 0.82
PCDHGA11-202ENST00000518882 MCCP23508 829 aa20.15■□□□□ 0.82
PCDHGA11-202ENST00000518882 HSP90AA2PQ14568 343 aaPredicted RBP20.15■□□□□ 0.82
PCDHGA11-202ENST00000518882 USP44Q9H0E7 712 aa20.15■□□□□ 0.82
PCDHGA11-202ENST00000518882 GNAT3A8MTJ3 354 aa20.15■□□□□ 0.82
PCDHGA11-202ENST00000518882 OFD1O75665 1012 aa20.15■□□□□ 0.82
PCDHGA11-202ENST00000518882 HS1BP3Q53T59 392 aa20.15■□□□□ 0.82
PCDHGA11-202ENST00000518882 IL1RAPL2Q9NP60 686 aa20.15■□□□□ 0.82
PCDHGA11-202ENST00000518882 NWD1Q149M9 1564 aa20.14■□□□□ 0.82
PCDHGA11-202ENST00000518882 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
PCDHGA11-202ENST00000518882 RRP9O43818 475 aaKnown RBP20.14■□□□□ 0.81
PCDHGA11-202ENST00000518882 IL17REQ8NFR9 667 aa20.14■□□□□ 0.81
PCDHGA11-202ENST00000518882 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
PCDHGA11-202ENST00000518882 NGDNQ8NEJ9 315 aaKnown RBP20.14■□□□□ 0.81
PCDHGA11-202ENST00000518882 IL17RAQ96F46 866 aa20.14■□□□□ 0.81
PCDHGA11-202ENST00000518882 INTS4Q96HW7 963 aaKnown RBP20.14■□□□□ 0.81
PCDHGA11-202ENST00000518882 NOL7Q9UMY1 257 aaKnown RBP20.14■□□□□ 0.81
PCDHGA11-202ENST00000518882 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
PCDHGA11-202ENST00000518882 TPM2P07951 284 aa20.13■□□□□ 0.81
PCDHGA11-202ENST00000518882 SRCIN1Q9C0H9 1055 aa20.13■□□□□ 0.81
PCDHGA11-202ENST00000518882 AMOTL2Q9Y2J4 779 aa20.13■□□□□ 0.81
PCDHGA11-202ENST00000518882 MBD3O95983 291 aa20.12■□□□□ 0.81
PCDHGA11-202ENST00000518882 NUTM1Q86Y26 1132 aa20.12■□□□□ 0.81
PCDHGA11-202ENST00000518882 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
PCDHGA11-202ENST00000518882 PHAXQ9H814 394 aaKnown RBP20.11■□□□□ 0.81
PCDHGA11-202ENST00000518882 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
PCDHGA11-202ENST00000518882 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
PCDHGA11-202ENST00000518882 FOXD4L6Q3SYB3 417 aaPredicted RBP20.11■□□□□ 0.81
PCDHGA11-202ENST00000518882 FOXD4L3Q6VB84 417 aaPredicted RBP20.11■□□□□ 0.81
PCDHGA11-202ENST00000518882 MAP3K5Q99683 1374 aa20.11■□□□□ 0.81
PCDHGA11-202ENST00000518882 MAP4K4O95819 1239 aaPredicted RBP20.1■□□□□ 0.81
PCDHGA11-202ENST00000518882 RNF214Q8ND24 703 aa20.1■□□□□ 0.81
PCDHGA11-202ENST00000518882 SSH3Q8TE77 659 aa20.1■□□□□ 0.81
PCDHGA11-202ENST00000518882 HOXC9P31274 260 aa20.1■□□□□ 0.81
PCDHGA11-202ENST00000518882 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
PCDHGA11-202ENST00000518882 GDPD2Q9HCC8 539 aa20.1■□□□□ 0.81
PCDHGA11-202ENST00000518882 AOX1Q06278 1338 aa20.09■□□□□ 0.81
PCDHGA11-202ENST00000518882 NLRP6P59044 892 aa20.09■□□□□ 0.81
PCDHGA11-202ENST00000518882 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms