RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 ATP6V1AP38606 617 aa23.24■■□□□ 1.31
TNPO1-211ENST00000518279 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
TNPO1-211ENST00000518279 EIF4A2Q14240 407 aaKnown RBP23.24■■□□□ 1.31
TNPO1-211ENST00000518279 HSPA5P11021 654 aaKnown RBP23.23■■□□□ 1.31
TNPO1-211ENST00000518279 GPBP1L1Q9HC44 474 aaPredicted RBP23.23■■□□□ 1.31
TNPO1-211ENST00000518279 TNNT2P45379 298 aaPredicted RBP23.22■■□□□ 1.31
TNPO1-211ENST00000518279 ZNF526Q8TF50 670 aaPredicted RBP23.22■■□□□ 1.31
TNPO1-211ENST00000518279 SLC4A9Q96Q91 983 aa23.2■■□□□ 1.3
TNPO1-211ENST00000518279 KDRP35968 1356 aa23.19■■□□□ 1.3
TNPO1-211ENST00000518279 POLR3GLQ9BT43 218 aa23.19■■□□□ 1.3
TNPO1-211ENST00000518279 MMP10P09238 476 aa23.18■■□□□ 1.3
TNPO1-211ENST00000518279 KIAA1551Q9HCM1 1747 aa23.16■■□□□ 1.3
TNPO1-211ENST00000518279 KIF13BQ9NQT8 1826 aa23.15■■□□□ 1.3
TNPO1-211ENST00000518279 ADRA2BP18089 450 aa23.15■■□□□ 1.3
TNPO1-211ENST00000518279 PXDNLA1KZ92 1463 aa23.15■■□□□ 1.3
TNPO1-211ENST00000518279 ERVV-2B6SEH9 535 aa23.14■■□□□ 1.29
TNPO1-211ENST00000518279 RBM42Q9BTD8 480 aaKnown RBP23.14■■□□□ 1.29
TNPO1-211ENST00000518279 RTCBQ9Y3I0 505 aaKnown RBP23.14■■□□□ 1.29
TNPO1-211ENST00000518279 CICQ96RK0 1608 aaPredicted RBP23.14■■□□□ 1.29
TNPO1-211ENST00000518279 N4BP2Q86UW6 1770 aaPredicted RBP23.14■■□□□ 1.29
TNPO1-211ENST00000518279 PLEKHG2Q9H7P9 1386 aa23.14■■□□□ 1.29
TNPO1-211ENST00000518279 TRAPPC3LQ5T215 181 aa23.13■■□□□ 1.29
TNPO1-211ENST00000518279 COL5A3P25940 1745 aaPredicted RBP23.13■■□□□ 1.29
TNPO1-211ENST00000518279 ZNF831Q5JPB2 1677 aa23.13■■□□□ 1.29
TNPO1-211ENST00000518279 KDM6AO15550 1401 aaPredicted RBP23.12■■□□□ 1.29
TNPO1-211ENST00000518279 ARHGEF1Q92888 912 aaKnown RBP23.12■■□□□ 1.29
TNPO1-211ENST00000518279 DCAF5Q96JK2 942 aa23.12■■□□□ 1.29
TNPO1-211ENST00000518279 HSPA6P17066 643 aa23.11■■□□□ 1.29
TNPO1-211ENST00000518279 A0A0G2JLW4 131 aa23.1■■□□□ 1.29
TNPO1-211ENST00000518279 KIF3CO14782 793 aa23.1■■□□□ 1.29
TNPO1-211ENST00000518279 RC3H1Q5TC82 1133 aaKnown RBP23.1■■□□□ 1.29
TNPO1-211ENST00000518279 NLGN1Q8N2Q7 840 aa23.1■■□□□ 1.29
TNPO1-211ENST00000518279 MYH14Q7Z406 1995 aaKnown RBP23.1■■□□□ 1.29
TNPO1-211ENST00000518279 C10orf71Q711Q0 1435 aa23.09■■□□□ 1.29
TNPO1-211ENST00000518279 GYS1P13807 737 aa23.09■■□□□ 1.29
TNPO1-211ENST00000518279 PLEKHO1Q53GL0 409 aaPredicted RBP23.09■■□□□ 1.29
TNPO1-211ENST00000518279 ZNF530Q6P9A1 599 aaPredicted RBP23.09■■□□□ 1.29
TNPO1-211ENST00000518279 PANK3Q9H999 370 aa23.09■■□□□ 1.29
TNPO1-211ENST00000518279 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.29
TNPO1-211ENST00000518279 HSP90AB1P08238 724 aaKnown RBP23.08■■□□□ 1.29
TNPO1-211ENST00000518279 TGFB2P61812 414 aa23.08■■□□□ 1.29
TNPO1-211ENST00000518279 AEBP1Q8IUX7 1158 aa23.08■■□□□ 1.29
TNPO1-211ENST00000518279 RPS6KA4O75676 772 aa23.07■■□□□ 1.28
TNPO1-211ENST00000518279 CABP4P57796 275 aa23.07■■□□□ 1.28
TNPO1-211ENST00000518279 IFFO2Q5TF58 517 aa23.07■■□□□ 1.28
TNPO1-211ENST00000518279 BCS1LQ9Y276 419 aa23.07■■□□□ 1.28
TNPO1-211ENST00000518279 C4AP0C0L4 1744 aa23.07■■□□□ 1.28
TNPO1-211ENST00000518279 DPEP1P16444 411 aa23.05■■□□□ 1.28
TNPO1-211ENST00000518279 RFC4P35249 363 aa23.05■■□□□ 1.28
TNPO1-211ENST00000518279 AMOTQ4VCS5 1084 aa23.05■■□□□ 1.28
TNPO1-211ENST00000518279 PTCD1O75127 700 aaKnown RBP23.04■■□□□ 1.28
TNPO1-211ENST00000518279 BRCA1P38398 1863 aaKnown RBP23.03■■□□□ 1.28
TNPO1-211ENST00000518279 MTHFSP49914 203 aa23.03■■□□□ 1.28
TNPO1-211ENST00000518279 NFATC2IPQ8NCF5 419 aa23.03■■□□□ 1.28
TNPO1-211ENST00000518279 CCDC87Q9NVE4 849 aa23.03■■□□□ 1.28
TNPO1-211ENST00000518279 KCNA3P22001 575 aa23.02■■□□□ 1.28
TNPO1-211ENST00000518279 ARHGAP27Q6ZUM4 889 aa23.02■■□□□ 1.28
TNPO1-211ENST00000518279 PARP3Q9Y6F1 533 aa23.02■■□□□ 1.28
TNPO1-211ENST00000518279 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
TNPO1-211ENST00000518279 C1orf141Q5JVX7 400 aa23.01■■□□□ 1.27
TNPO1-211ENST00000518279 MORC1Q86VD1 984 aa23.01■■□□□ 1.27
TNPO1-211ENST00000518279 SRP68Q9UHB9 627 aaKnown RBP23.01■■□□□ 1.27
TNPO1-211ENST00000518279 TJP1Q07157 1748 aa23■■□□□ 1.27
TNPO1-211ENST00000518279 FCHSD2O94868 740 aa23■■□□□ 1.27
TNPO1-211ENST00000518279 SULT6B1Q6IMI4 303 aa23■■□□□ 1.27
TNPO1-211ENST00000518279 FKBP8Q14318 412 aa22.98■■□□□ 1.27
TNPO1-211ENST00000518279 KIF7Q2M1P5 1343 aa22.98■■□□□ 1.27
TNPO1-211ENST00000518279 IL13P35225 146 aa22.97■■□□□ 1.27
TNPO1-211ENST00000518279 DDR1Q08345 913 aa22.97■■□□□ 1.27
TNPO1-211ENST00000518279 USP42Q9H9J4 1324 aaKnown RBP22.97■■□□□ 1.27
TNPO1-211ENST00000518279 SCN11AQ9UI33 1791 aa22.96■■□□□ 1.27
TNPO1-211ENST00000518279 NMRK2Q9NPI5 230 aa22.96■■□□□ 1.27
TNPO1-211ENST00000518279 ADAMTS7Q9UKP4 1686 aa22.96■■□□□ 1.27
TNPO1-211ENST00000518279 ARFGEF1Q9Y6D6 1849 aa22.96■■□□□ 1.27
TNPO1-211ENST00000518279 INTS5Q6P9B9 1019 aaKnown RBP22.95■■□□□ 1.26
TNPO1-211ENST00000518279 TOMM70O94826 608 aa22.94■■□□□ 1.26
TNPO1-211ENST00000518279 C9orf131Q5VYM1 1079 aa22.93■■□□□ 1.26
TNPO1-211ENST00000518279 LGR6Q9HBX8 967 aa22.93■■□□□ 1.26
TNPO1-211ENST00000518279 PIM2Q9P1W9 311 aa22.93■■□□□ 1.26
TNPO1-211ENST00000518279 CHRNA5P30532 468 aa22.92■■□□□ 1.26
TNPO1-211ENST00000518279 DNAJC10Q8IXB1 793 aa22.92■■□□□ 1.26
TNPO1-211ENST00000518279 KNSTRNQ9Y448 316 aa22.92■■□□□ 1.26
TNPO1-211ENST00000518279 POLRMTO00411 1230 aaKnown RBP22.91■■□□□ 1.26
TNPO1-211ENST00000518279 APLP1P51693 650 aa22.91■■□□□ 1.26
TNPO1-211ENST00000518279 AKAP4Q5JQC9 854 aa22.91■■□□□ 1.26
TNPO1-211ENST00000518279 TM4SF1P30408 202 aa22.9■■□□□ 1.26
TNPO1-211ENST00000518279 DALRD3Q5D0E6 543 aaKnown RBP22.9■■□□□ 1.26
TNPO1-211ENST00000518279 SLC52A2Q9HAB3 445 aa22.9■■□□□ 1.26
TNPO1-211ENST00000518279 SLC39A6Q13433 755 aa22.89■■□□□ 1.25
TNPO1-211ENST00000518279 AMER1Q5JTC6 1135 aaPredicted RBP22.89■■□□□ 1.25
TNPO1-211ENST00000518279 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.25
TNPO1-211ENST00000518279 DNAJC5GQ8N7S2 189 aa22.89■■□□□ 1.25
TNPO1-211ENST00000518279 PCNTO95613 3336 aa22.88■■□□□ 1.25
TNPO1-211ENST00000518279 SOS1Q07889 1333 aaPredicted RBP22.87■■□□□ 1.25
TNPO1-211ENST00000518279 CYP19A1P11511 503 aaPredicted RBP22.87■■□□□ 1.25
TNPO1-211ENST00000518279 MRC1P22897 1456 aa22.86■■□□□ 1.25
TNPO1-211ENST00000518279 RNMTO43148 476 aaKnown RBP22.86■■□□□ 1.25
TNPO1-211ENST00000518279 HMOX1P09601 288 aa22.86■■□□□ 1.25
TNPO1-211ENST00000518279 VIRMAQ69YN4 1812 aaKnown RBP22.86■■□□□ 1.25
TNPO1-211ENST00000518279 KCPQ6ZWJ8 1503 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms