RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 CHD1LQ86WJ1 897 aa4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 RWDD1Q9H446 243 aaPredicted RBP4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 AMOTL2Q9Y2J4 779 aa4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 MYH6P13533 1939 aa4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 PTPRCP08575 1304 aa4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 IBTKQ9P2D0 1353 aaPredicted RBP4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 COL24A1Q17RW2 1714 aa4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 COL14A1Q05707 1796 aaKnown RBP4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 DLEC1Q9Y238 1755 aa4.12□□□□□ -1.75
SCARNA20.6-201ENST00000517251 CDK5RAP2Q96SN8 1893 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 FOXO3O43524 673 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 FRAT2O75474 233 aaPredicted RBP4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 MTHFSDQ2M296 383 aaKnown RBP4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 SULT6B1Q6IMI4 303 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 TBC1D9Q6ZT07 1266 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 MCM10Q7L590 875 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 G2E3Q7L622 706 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 ANKRD44Q8N8A2 993 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 EYA1Q99502 592 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 MEIS3Q99687 375 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 LNPKQ9C0E8 428 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 PNNQ9H307 717 aaKnown RBP4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 TIAM2Q8IVF5 1701 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 MAST2Q6P0Q8 1798 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 TAF1LQ8IZX4 1826 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 ADCY9O60503 1353 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 TNS2Q63HR2 1409 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 TNS3Q68CZ2 1445 aa4.11□□□□□ -1.75
SCARNA20.6-201ENST00000517251 AHDC1Q5TGY3 1603 aaPredicted RBP4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 IPO8O15397 1037 aaKnown RBP4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 RTL5Q5HYW3 569 aaPredicted RBP4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 TTC22Q5TAA0 569 aa4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 PLEKHM2Q8IWE5 1019 aa4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 OTUD7AQ8TE49 926 aaPredicted RBP4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 SNX21Q969T3 373 aa4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 GCC1Q96CN9 775 aa4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 IL17RAQ96F46 866 aa4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 API5Q9BZZ5 524 aaKnown RBP4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 DCTPP1Q9H773 170 aa4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 MYH14Q7Z406 1995 aaKnown RBP4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 SOS1Q07889 1333 aaPredicted RBP4.1□□□□□ -1.75
SCARNA20.6-201ENST00000517251 MYH1P12882 1939 aa4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 NUTM2FA1L443 756 aa4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 FSD2A1L4K1 749 aa4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 CYP2E1P05181 493 aaPredicted RBP4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 MFAP1P55081 439 aaKnown RBP4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 IL27Q8NEV9 243 aa4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 C22orf23Q9BZE7 217 aa4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 JCADQ9P266 1359 aa4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 SLIT2O94813 1529 aa4.09□□□□□ -1.75
SCARNA20.6-201ENST00000517251 COL4A1P02462 1669 aa4.09□□□□□ -1.76
SCARNA20.6-201ENST00000517251 HTATSF1O43719 755 aaKnown RBP4.08□□□□□ -1.76
SCARNA20.6-201ENST00000517251 COL5A2P05997 1499 aaPredicted RBP4.08□□□□□ -1.76
SCARNA20.6-201ENST00000517251 HDGFP51858 240 aaKnown RBP4.08□□□□□ -1.76
SCARNA20.6-201ENST00000517251 THEMISQ8N1K5 641 aaPredicted RBP4.08□□□□□ -1.76
SCARNA20.6-201ENST00000517251 GAS2L2Q8NHY3 880 aa4.08□□□□□ -1.76
SCARNA20.6-201ENST00000517251 SLKQ9H2G2 1235 aaPredicted RBP4.08□□□□□ -1.76
SCARNA20.6-201ENST00000517251 USP42Q9H9J4 1324 aaKnown RBP4.08□□□□□ -1.76
SCARNA20.6-201ENST00000517251 EID1Q9Y6B2 187 aa4.08□□□□□ -1.76
SCARNA20.6-201ENST00000517251 TAF1P21675 1872 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 ZNF646O15015 1829 aaPredicted RBP4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 LY75O60449 1722 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 DDX60LQ5H9U9 1706 aaKnown RBP4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 CPDO75976 1380 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 ERBB3P21860 1342 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 AOX1Q06278 1338 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 F6X3S4 739 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 ELL2O00472 640 aaPredicted RBP4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 CDC45O75419 566 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 FLIIQ13045 1269 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 BECN1Q14457 450 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 GSE1Q14687 1217 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 RAB3GAP1Q15042 981 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 CLEC17AQ6ZS10 378 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 IL17REQ8NFR9 667 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 IL25Q9H293 177 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 OSBPL3Q9H4L5 887 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 ESF1Q9H501 851 aaKnown RBP4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 BABAM1Q9NWV8 329 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 BRPF3Q9ULD4 1205 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 PHF8Q9UPP1 1060 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 FOCADQ5VW36 1801 aa4.07□□□□□ -1.76
SCARNA20.6-201ENST00000517251 DISP2A7MBM2 1401 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 COL15A1P39059 1388 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 PNMA6EA0A0J9YXQ4 647 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 GNAT3A8MTJ3 354 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 HOXB7P09629 217 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 SDSP20132 328 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 MCM4P33991 863 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 POLA2Q14181 598 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 NBPF6Q5VWK0 638 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 LRP10Q7Z4F1 713 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 ARHGEF25Q86VW2 580 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 RPAP2Q8IXW5 612 aaPredicted RBP4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 USHBP1Q8N6Y0 703 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 IP6K1Q92551 441 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 NBPF4Q96M43 638 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 RBM42Q9BTD8 480 aaKnown RBP4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 CHMP5Q9NZZ3 219 aa4.06□□□□□ -1.76
SCARNA20.6-201ENST00000517251 TSPYL4Q9UJ04 414 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms