RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 GPC1P35052 558 aa6.34□□□□□ -1.39
RN7SKP40-201ENST00000517211 CTDSPL2Q05D32 466 aa6.34□□□□□ -1.39
RN7SKP40-201ENST00000517211 FMNL2Q96PY5 1086 aa6.34□□□□□ -1.39
RN7SKP40-201ENST00000517211 FGFR3P22607 806 aa6.33□□□□□ -1.4
RN7SKP40-201ENST00000517211 LRRN4Q8WUT4 740 aa6.33□□□□□ -1.4
RN7SKP40-201ENST00000517211 FKBPLQ9UIM3 349 aa6.33□□□□□ -1.4
RN7SKP40-201ENST00000517211 COL17A1Q9UMD9 1497 aaPredicted RBP6.33□□□□□ -1.4
RN7SKP40-201ENST00000517211 SPATA31C2B4DYI2 1134 aa6.32□□□□□ -1.4
RN7SKP40-201ENST00000517211 WASLO00401 505 aaPredicted RBP6.32□□□□□ -1.4
RN7SKP40-201ENST00000517211 LILRB3O75022 631 aa6.32□□□□□ -1.4
RN7SKP40-201ENST00000517211 TXKP42681 527 aa6.32□□□□□ -1.4
RN7SKP40-201ENST00000517211 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
RN7SKP40-201ENST00000517211 FCHSD1Q86WN1 690 aa6.32□□□□□ -1.4
RN7SKP40-201ENST00000517211 NDFIP2Q9NV92 336 aa6.32□□□□□ -1.4
RN7SKP40-201ENST00000517211 PHF24Q9UPV7 400 aa6.32□□□□□ -1.4
RN7SKP40-201ENST00000517211 PAX4O43316 350 aa6.31□□□□□ -1.4
RN7SKP40-201ENST00000517211 TAS1R3Q7RTX0 852 aa6.31□□□□□ -1.4
RN7SKP40-201ENST00000517211 ESPNB1AK53 854 aa6.3□□□□□ -1.4
RN7SKP40-201ENST00000517211 NR6A1Q15406 480 aa6.3□□□□□ -1.4
RN7SKP40-201ENST00000517211 GRIK4Q16099 956 aa6.3□□□□□ -1.4
RN7SKP40-201ENST00000517211 NLRP3Q96P20 1036 aa6.29□□□□□ -1.4
RN7SKP40-201ENST00000517211 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
RN7SKP40-201ENST00000517211 ATXN7L1Q9ULK2 861 aaPredicted RBP6.29□□□□□ -1.4
RN7SKP40-201ENST00000517211 ARAFP10398 606 aa6.28□□□□□ -1.4
RN7SKP40-201ENST00000517211 NBPF20Q3BBV1 942 aa6.28□□□□□ -1.4
RN7SKP40-201ENST00000517211 HELBQ8NG08 1087 aaPredicted RBP6.27□□□□□ -1.41
RN7SKP40-201ENST00000517211 TRIM52Q96A61 297 aa6.27□□□□□ -1.41
RN7SKP40-201ENST00000517211 RAB6BQ9NRW1 208 aa6.27□□□□□ -1.41
RN7SKP40-201ENST00000517211 APBA3O96018 575 aa6.26□□□□□ -1.41
RN7SKP40-201ENST00000517211 WDR44Q5JSH3 913 aa6.26□□□□□ -1.41
RN7SKP40-201ENST00000517211 DZIP3Q86Y13 1208 aaKnown RBP6.26□□□□□ -1.41
RN7SKP40-201ENST00000517211 EPS8L1Q8TE68 723 aa6.26□□□□□ -1.41
RN7SKP40-201ENST00000517211 ARHGEF10LQ9HCE6 1279 aa6.26□□□□□ -1.41
RN7SKP40-201ENST00000517211 MSX1P28360 303 aa6.25□□□□□ -1.41
RN7SKP40-201ENST00000517211 SCTRP47872 440 aa6.25□□□□□ -1.41
RN7SKP40-201ENST00000517211 PCBP4P57723 403 aaKnown RBP6.25□□□□□ -1.41
RN7SKP40-201ENST00000517211 PTK2Q05397 1052 aa6.25□□□□□ -1.41
RN7SKP40-201ENST00000517211 CLN3Q13286 438 aa6.25□□□□□ -1.41
RN7SKP40-201ENST00000517211 COL9A3Q14050 684 aaPredicted RBP6.25□□□□□ -1.41
RN7SKP40-201ENST00000517211 MYSM1Q5VVJ2 828 aa6.25□□□□□ -1.41
RN7SKP40-201ENST00000517211 C8orf86Q6ZUL3 223 aa6.25□□□□□ -1.41
RN7SKP40-201ENST00000517211 GIGYF1O75420 1035 aaPredicted RBP6.24□□□□□ -1.41
RN7SKP40-201ENST00000517211 H2AFB1P0C5Y9 115 aa6.24□□□□□ -1.41
RN7SKP40-201ENST00000517211 H2AFB2P0C5Z0 115 aa6.24□□□□□ -1.41
RN7SKP40-201ENST00000517211 FBXO31Q5XUX0 539 aaPredicted RBP6.24□□□□□ -1.41
RN7SKP40-201ENST00000517211 ELNP15502 786 aa6.23□□□□□ -1.41
RN7SKP40-201ENST00000517211 TAL1P17542 331 aaPredicted RBP6.22□□□□□ -1.41
RN7SKP40-201ENST00000517211 CD33P20138 364 aa6.22□□□□□ -1.41
RN7SKP40-201ENST00000517211 DIXDC1Q155Q3 683 aa6.22□□□□□ -1.41
RN7SKP40-201ENST00000517211 AMHR2Q16671 573 aa6.22□□□□□ -1.41
RN7SKP40-201ENST00000517211 DNAAF2Q9NVR5 837 aaKnown RBP6.22□□□□□ -1.41
RN7SKP40-201ENST00000517211 A0A1B0GTH6 734 aa6.21□□□□□ -1.42
RN7SKP40-201ENST00000517211 CENPCQ03188 943 aa6.21□□□□□ -1.42
RN7SKP40-201ENST00000517211 C4orf17Q53FE4 359 aa6.21□□□□□ -1.42
RN7SKP40-201ENST00000517211 PRRT3Q5FWE3 981 aa6.21□□□□□ -1.42
RN7SKP40-201ENST00000517211 PARP9Q8IXQ6 854 aa6.21□□□□□ -1.42
RN7SKP40-201ENST00000517211 IL2RAP01589 272 aa6.2□□□□□ -1.42
RN7SKP40-201ENST00000517211 CSB-PGBD3P0DP91 1061 aa6.2□□□□□ -1.42
RN7SKP40-201ENST00000517211 ADH6P28332 368 aa6.2□□□□□ -1.42
RN7SKP40-201ENST00000517211 ERVK-9P63128 1117 aa6.2□□□□□ -1.42
RN7SKP40-201ENST00000517211 PGBD3Q8N328 593 aa6.2□□□□□ -1.42
RN7SKP40-201ENST00000517211 ZCCHC2Q9C0B9 1178 aaKnown RBP6.2□□□□□ -1.42
RN7SKP40-201ENST00000517211 RNF114Q9Y508 228 aa6.2□□□□□ -1.42
RN7SKP40-201ENST00000517211 SELPP16109 830 aa6.19□□□□□ -1.42
RN7SKP40-201ENST00000517211 NRG1Q02297 640 aaPredicted RBP6.19□□□□□ -1.42
RN7SKP40-201ENST00000517211 MBTPS1Q14703 1052 aa6.19□□□□□ -1.42
RN7SKP40-201ENST00000517211 TP53INP1Q96A56 240 aa6.19□□□□□ -1.42
RN7SKP40-201ENST00000517211 OSBPL3Q9H4L5 887 aa6.19□□□□□ -1.42
RN7SKP40-201ENST00000517211 DCDC2BA2VCK2 349 aa6.18□□□□□ -1.42
RN7SKP40-201ENST00000517211 EFHC2Q5JST6 749 aa6.18□□□□□ -1.42
RN7SKP40-201ENST00000517211 PPP2R2DQ66LE6 453 aa6.18□□□□□ -1.42
RN7SKP40-201ENST00000517211 CC2D2BQ6DHV5 1058 aa6.18□□□□□ -1.42
RN7SKP40-201ENST00000517211 SHISA2Q6UWI4 295 aa6.18□□□□□ -1.42
RN7SKP40-201ENST00000517211 SSTR4P31391 388 aa6.17□□□□□ -1.42
RN7SKP40-201ENST00000517211 JAG1P78504 1218 aa6.17□□□□□ -1.42
RN7SKP40-201ENST00000517211 ADGRE1Q14246 886 aa6.17□□□□□ -1.42
RN7SKP40-201ENST00000517211 LBRQ14739 615 aaKnown RBP6.17□□□□□ -1.42
RN7SKP40-201ENST00000517211 CNKSR1Q969H4 720 aa6.17□□□□□ -1.42
RN7SKP40-201ENST00000517211 PCMTD2Q9NV79 361 aa6.17□□□□□ -1.42
RN7SKP40-201ENST00000517211 RNF112Q9ULX5 631 aa6.17□□□□□ -1.42
RN7SKP40-201ENST00000517211 IRAK1P51617 712 aa6.16□□□□□ -1.42
RN7SKP40-201ENST00000517211 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
RN7SKP40-201ENST00000517211 TUSC1Q2TAM9 212 aa6.16□□□□□ -1.42
RN7SKP40-201ENST00000517211 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
RN7SKP40-201ENST00000517211 STARD13Q9Y3M8 1113 aa6.16□□□□□ -1.42
RN7SKP40-201ENST00000517211 GPSM3Q9Y4H4 160 aa6.16□□□□□ -1.42
RN7SKP40-201ENST00000517211 OAS3Q9Y6K5 1087 aaKnown RBP6.16□□□□□ -1.42
RN7SKP40-201ENST00000517211 M0R082 166 aa6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 STAU1O95793 577 aaKnown RBP6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 MAPTP10636 758 aaKnown RBP6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 ZNF417Q8TAU3 575 aa6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 ZNF587Q96SQ5 575 aaPredicted RBP6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 ZSCAN10Q96SZ4 725 aaPredicted RBP6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 FHDC1Q9C0D6 1143 aaPredicted RBP6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 STRN4Q9NRL3 753 aa6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 POLR3EQ9NVU0 708 aa6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 PCDHGC4Q9Y5F7 938 aa6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 HRH3Q9Y5N1 445 aa6.15□□□□□ -1.42
RN7SKP40-201ENST00000517211 ZC3H4Q9UPT8 1303 aaKnown RBP6.15□□□□□ -1.43
RN7SKP40-201ENST00000517211 TRAK2O60296 914 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms