RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 CCNL1Q9UK58 526 aaPredicted RBP19.31■□□□□ 0.68
SCARNA21-201ENST00000517026 RGPD3A6NKT7 1758 aaPredicted RBP19.3■□□□□ 0.68
SCARNA21-201ENST00000517026 RGPD4Q7Z3J3 1758 aa19.3■□□□□ 0.68
SCARNA21-201ENST00000517026 YY1P25490 414 aa19.3■□□□□ 0.68
SCARNA21-201ENST00000517026 NBPF14Q5TI25 921 aa19.3■□□□□ 0.68
SCARNA21-201ENST00000517026 RUNDC1Q96C34 613 aa19.3■□□□□ 0.68
SCARNA21-201ENST00000517026 ANO8Q9HCE9 1232 aaPredicted RBP19.3■□□□□ 0.68
SCARNA21-201ENST00000517026 SLC27A3Q5K4L6 730 aa19.29■□□□□ 0.68
SCARNA21-201ENST00000517026 DIEXFQ68CQ4 756 aaKnown RBP19.29■□□□□ 0.68
SCARNA21-201ENST00000517026 RTF1Q92541 710 aaKnown RBP19.29■□□□□ 0.68
SCARNA21-201ENST00000517026 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
SCARNA21-201ENST00000517026 SLC39A6Q13433 755 aa19.28■□□□□ 0.68
SCARNA21-201ENST00000517026 SPON1Q9HCB6 807 aa19.28■□□□□ 0.68
SCARNA21-201ENST00000517026 CASZ1Q86V15 1759 aa19.27■□□□□ 0.68
SCARNA21-201ENST00000517026 LOC102724428A0A0B4J2F2 783 aa19.27■□□□□ 0.68
SCARNA21-201ENST00000517026 HTATSF1O43719 755 aaKnown RBP19.27■□□□□ 0.68
SCARNA21-201ENST00000517026 TMPOP42166 694 aaKnown RBP19.27■□□□□ 0.68
SCARNA21-201ENST00000517026 SIK1P57059 783 aa19.27■□□□□ 0.68
SCARNA21-201ENST00000517026 TEFQ10587 303 aa19.27■□□□□ 0.68
SCARNA21-201ENST00000517026 THUMPD2Q9BTF0 503 aaKnown RBP19.27■□□□□ 0.68
SCARNA21-201ENST00000517026 CEMIPQ8WUJ3 1361 aa19.27■□□□□ 0.68
SCARNA21-201ENST00000517026 ITGB4P16144 1822 aa19.26■□□□□ 0.67
SCARNA21-201ENST00000517026 PTCD1O75127 700 aaKnown RBP19.26■□□□□ 0.67
SCARNA21-201ENST00000517026 RIPK4P57078 832 aa19.26■□□□□ 0.67
SCARNA21-201ENST00000517026 NEUROD2Q15784 382 aa19.26■□□□□ 0.67
SCARNA21-201ENST00000517026 SLC4A9Q96Q91 983 aa19.26■□□□□ 0.67
SCARNA21-201ENST00000517026 RBM42Q9BTD8 480 aaKnown RBP19.26■□□□□ 0.67
SCARNA21-201ENST00000517026 ZNF827Q17R98 1081 aa19.25■□□□□ 0.67
SCARNA21-201ENST00000517026 MRC1P22897 1456 aa19.24■□□□□ 0.67
SCARNA21-201ENST00000517026 ITPK1Q13572 414 aa19.24■□□□□ 0.67
SCARNA21-201ENST00000517026 STK32BQ9NY57 414 aa19.24■□□□□ 0.67
SCARNA21-201ENST00000517026 SENP3-EIF4A1A0A087X0R7 540 aa19.23■□□□□ 0.67
SCARNA21-201ENST00000517026 APAF1O14727 1248 aa19.23■□□□□ 0.67
SCARNA21-201ENST00000517026 ATP6V1AP38606 617 aa19.23■□□□□ 0.67
SCARNA21-201ENST00000517026 SLC15A2Q16348 729 aa19.23■□□□□ 0.67
SCARNA21-201ENST00000517026 ADAMTS7Q9UKP4 1686 aa19.23■□□□□ 0.67
SCARNA21-201ENST00000517026 SCN11AQ9UI33 1791 aa19.22■□□□□ 0.67
SCARNA21-201ENST00000517026 KCNQ3O43525 872 aa19.22■□□□□ 0.67
SCARNA21-201ENST00000517026 AKT1S1Q96B36 256 aa19.22■□□□□ 0.67
SCARNA21-201ENST00000517026 BTBD11A6QL63 1104 aa19.21■□□□□ 0.67
SCARNA21-201ENST00000517026 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
SCARNA21-201ENST00000517026 LINC00116Q8NCU8 138 aa19.21■□□□□ 0.67
SCARNA21-201ENST00000517026 PDGFDQ9GZP0 370 aaPredicted RBP19.21■□□□□ 0.67
SCARNA21-201ENST00000517026 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
SCARNA21-201ENST00000517026 MIER1Q8N108 512 aa19.2■□□□□ 0.66
SCARNA21-201ENST00000517026 TRIM35Q9UPQ4 493 aa19.2■□□□□ 0.66
SCARNA21-201ENST00000517026 TAF7Q15545 349 aaPredicted RBP19.19■□□□□ 0.66
SCARNA21-201ENST00000517026 ZNF790Q6PG37 636 aa19.19■□□□□ 0.66
SCARNA21-201ENST00000517026 LY75O60449 1722 aa19.18■□□□□ 0.66
SCARNA21-201ENST00000517026 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
SCARNA21-201ENST00000517026 ZNF496Q96IT1 587 aaPredicted RBP19.18■□□□□ 0.66
SCARNA21-201ENST00000517026 PTGER2P43116 358 aa19.17■□□□□ 0.66
SCARNA21-201ENST00000517026 LMOD3Q0VAK6 560 aa19.17■□□□□ 0.66
SCARNA21-201ENST00000517026 SMIM5Q71RC9 77 aa19.17■□□□□ 0.66
SCARNA21-201ENST00000517026 DNAJC10Q8IXB1 793 aa19.17■□□□□ 0.66
SCARNA21-201ENST00000517026 TFCP2L1Q9NZI6 479 aa19.17■□□□□ 0.66
SCARNA21-201ENST00000517026 PPP1R1BQ9UD71 204 aaPredicted RBP19.17■□□□□ 0.66
SCARNA21-201ENST00000517026 PAPPAQ13219 1627 aa19.16■□□□□ 0.66
SCARNA21-201ENST00000517026 CCER2I3L3R5 266 aa19.16■□□□□ 0.66
SCARNA21-201ENST00000517026 AMIGO3Q86WK7 504 aa19.15■□□□□ 0.66
SCARNA21-201ENST00000517026 AK7Q96M32 723 aa19.14■□□□□ 0.65
SCARNA21-201ENST00000517026 KCPQ6ZWJ8 1503 aa19.14■□□□□ 0.65
SCARNA21-201ENST00000517026 FMNL2Q96PY5 1086 aa19.13■□□□□ 0.65
SCARNA21-201ENST00000517026 PNPLA7Q6ZV29 1317 aa19.13■□□□□ 0.65
SCARNA21-201ENST00000517026 GNPATO15228 680 aa19.12■□□□□ 0.65
SCARNA21-201ENST00000517026 HEG1Q9ULI3 1381 aa19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 PHF14O94880 888 aa19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 CYP19A1P11511 503 aaPredicted RBP19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 HMGB2P26583 209 aaKnown RBP19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 CRKLP46109 303 aaKnown RBP19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 COL23A1Q86Y22 540 aaPredicted RBP19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 VSIG10Q8N0Z9 540 aa19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 SGIP1Q9BQI5 828 aa19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 SALL2Q9Y467 1007 aaPredicted RBP19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 LAS1LQ9Y4W2 734 aaKnown RBP19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 DLG5Q8TDM6 1919 aa19.11■□□□□ 0.65
SCARNA21-201ENST00000517026 GOLGB1Q14789 3259 aaKnown RBP19.1■□□□□ 0.65
SCARNA21-201ENST00000517026 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
SCARNA21-201ENST00000517026 ZBTB7AO95365 584 aa19.1■□□□□ 0.65
SCARNA21-201ENST00000517026 RC3H1Q5TC82 1133 aaKnown RBP19.1■□□□□ 0.65
SCARNA21-201ENST00000517026 INTS5Q6P9B9 1019 aaKnown RBP19.1■□□□□ 0.65
SCARNA21-201ENST00000517026 TSPYL4Q9UJ04 414 aa19.1■□□□□ 0.65
SCARNA21-201ENST00000517026 SIPA1L3O60292 1781 aaPredicted RBP19.09■□□□□ 0.65
SCARNA21-201ENST00000517026 CNTNAP4Q9C0A0 1308 aa19.09■□□□□ 0.65
SCARNA21-201ENST00000517026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.09■□□□□ 0.65
SCARNA21-201ENST00000517026 MSH5O43196 834 aa19.09■□□□□ 0.65
SCARNA21-201ENST00000517026 VIRMAQ69YN4 1812 aaKnown RBP19.09■□□□□ 0.65
SCARNA21-201ENST00000517026 DCAF8L1A6NGE4 600 aa19.08■□□□□ 0.64
SCARNA21-201ENST00000517026 EIF4A1P60842 406 aaKnown RBP19.08■□□□□ 0.64
SCARNA21-201ENST00000517026 ZNF784Q8NCA9 323 aaPredicted RBP19.08■□□□□ 0.64
SCARNA21-201ENST00000517026 ATF5Q9Y2D1 282 aaPredicted RBP19.08■□□□□ 0.64
SCARNA21-201ENST00000517026 C4BP0C0L5 1744 aa19.08■□□□□ 0.64
SCARNA21-201ENST00000517026 C5P01031 1676 aa19.08■□□□□ 0.64
SCARNA21-201ENST00000517026 CHL1O00533 1208 aa19.07■□□□□ 0.64
SCARNA21-201ENST00000517026 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
SCARNA21-201ENST00000517026 CCDC87Q9NVE4 849 aa19.07■□□□□ 0.64
SCARNA21-201ENST00000517026 RTCBQ9Y3I0 505 aaKnown RBP19.07■□□□□ 0.64
SCARNA21-201ENST00000517026 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
SCARNA21-201ENST00000517026 RPS6KA4O75676 772 aa19.06■□□□□ 0.64
SCARNA21-201ENST00000517026 STARD3NLO95772 234 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms