RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CYLDQ9NQC7 956 aa3.39□□□□□ -1.87
SCARNA23-201ENST00000516060 NDFIP2Q9NV92 336 aa3.39□□□□□ -1.87
SCARNA23-201ENST00000516060 KDM2AQ9Y2K7 1162 aa3.39□□□□□ -1.87
SCARNA23-201ENST00000516060 WASLO00401 505 aaPredicted RBP3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 BNIP3LO60238 219 aa3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 LBRQ14739 615 aaKnown RBP3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 NBPF20Q3BBV1 942 aa3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 PRRT3Q5FWE3 981 aa3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 TAS1R3Q7RTX0 852 aa3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 TRIM52Q96A61 297 aa3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 KLF15Q9UIH9 416 aa3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 RNF114Q9Y508 228 aa3.38□□□□□ -1.87
SCARNA23-201ENST00000516060 JAG1P78504 1218 aa3.37□□□□□ -1.87
SCARNA23-201ENST00000516060 FCHSD1Q86WN1 690 aa3.37□□□□□ -1.87
SCARNA23-201ENST00000516060 BEGAINQ9BUH8 593 aa3.37□□□□□ -1.87
SCARNA23-201ENST00000516060 RNF112Q9ULX5 631 aa3.37□□□□□ -1.87
SCARNA23-201ENST00000516060 SPDYE3A6NKU9 549 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 ESPNB1AK53 854 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 FAM229AH3BQW9 127 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 TAL1P17542 331 aaPredicted RBP3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 IRAK1P51617 712 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 DIXDC1Q155Q3 683 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 CSPP1Q1MSJ5 1256 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 ADAM32Q8TC27 787 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 NLRP3Q96P20 1036 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 NACC1Q96RE7 527 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 FKBPLQ9UIM3 349 aa3.36□□□□□ -1.87
SCARNA23-201ENST00000516060 A0A1B0GTH6 734 aa3.35□□□□□ -1.87
SCARNA23-201ENST00000516060 ADH6P28332 368 aa3.35□□□□□ -1.87
SCARNA23-201ENST00000516060 CLN3Q13286 438 aa3.35□□□□□ -1.87
SCARNA23-201ENST00000516060 GRIK4Q16099 956 aa3.35□□□□□ -1.87
SCARNA23-201ENST00000516060 QPCTQ16769 361 aa3.35□□□□□ -1.87
SCARNA23-201ENST00000516060 RUBCNLQ9H714 662 aa3.35□□□□□ -1.87
SCARNA23-201ENST00000516060 NUTM2BA6NNL0 878 aaPredicted RBP3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 NUTM2EB1AL46 878 aaPredicted RBP3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 LILRB3O75022 631 aa3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 CSB-PGBD3P0DP91 1061 aa3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 PHKA2P46019 1235 aa3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 PTK2Q05397 1052 aa3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 COL9A3Q14050 684 aaPredicted RBP3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 ADGRE1Q14246 886 aa3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 NUTM2DQ5VT03 806 aaPredicted RBP3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 NUTM2AQ8IVF1 878 aaPredicted RBP3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 PGBD3Q8N328 593 aa3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 HELBQ8NG08 1087 aaPredicted RBP3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 PCMTD2Q9NV79 361 aa3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 GPSM3Q9Y4H4 160 aa3.34□□□□□ -1.87
SCARNA23-201ENST00000516060 MBTPS1Q14703 1052 aa3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 RTL5Q5HYW3 569 aaPredicted RBP3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 EFHC2Q5JST6 749 aa3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 PPP2R2DQ66LE6 453 aa3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 SEPT12Q8IYM1 358 aa3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 TP53INP1Q96A56 240 aa3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 AVENQ9NQS1 362 aaPredicted RBP3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 HCN2Q9UL51 889 aa3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 ZC3H4Q9UPT8 1303 aaKnown RBP3.33□□□□□ -1.88
SCARNA23-201ENST00000516060 C9orf172C9J069 976 aa3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 MSX1P28360 303 aa3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 TRIM28Q13263 835 aaKnown RBP3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 TTLL12Q14166 644 aaPredicted RBP3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 TXNRD3Q86VQ6 643 aa3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 DZIP3Q86Y13 1208 aaKnown RBP3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 SSBP4Q9BWG4 385 aaPredicted RBP3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 LIMD1Q9UGP4 676 aa3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 OAS3Q9Y6K5 1087 aaKnown RBP3.32□□□□□ -1.88
SCARNA23-201ENST00000516060 PCBP4P57723 403 aaKnown RBP3.31□□□□□ -1.88
SCARNA23-201ENST00000516060 ERVK-9P63128 1117 aa3.31□□□□□ -1.88
SCARNA23-201ENST00000516060 CTDSPL2Q05D32 466 aa3.31□□□□□ -1.88
SCARNA23-201ENST00000516060 TUSC1Q2TAM9 212 aa3.31□□□□□ -1.88
SCARNA23-201ENST00000516060 FAM182BQ5T319 152 aa3.31□□□□□ -1.88
SCARNA23-201ENST00000516060 CCER1Q8TC90 406 aaPredicted RBP3.31□□□□□ -1.88
SCARNA23-201ENST00000516060 CRISPLD1Q9H336 500 aa3.31□□□□□ -1.88
SCARNA23-201ENST00000516060 DNAAF2Q9NVR5 837 aaKnown RBP3.31□□□□□ -1.88
SCARNA23-201ENST00000516060 SELPP16109 830 aa3.3□□□□□ -1.88
SCARNA23-201ENST00000516060 CENPCQ03188 943 aa3.3□□□□□ -1.88
SCARNA23-201ENST00000516060 CC2D2BQ6DHV5 1058 aa3.3□□□□□ -1.88
SCARNA23-201ENST00000516060 MDFIQ99750 246 aa3.3□□□□□ -1.88
SCARNA23-201ENST00000516060 KRTAP9-8Q9BYQ0 159 aa3.3□□□□□ -1.88
SCARNA23-201ENST00000516060 ZCCHC2Q9C0B9 1178 aaKnown RBP3.3□□□□□ -1.88
SCARNA23-201ENST00000516060 ARHGEF10LQ9HCE6 1279 aa3.3□□□□□ -1.88
SCARNA23-201ENST00000516060 PCDHGC4Q9Y5F7 938 aa3.3□□□□□ -1.88
SCARNA23-201ENST00000516060 ELOA3CA0A087WX78 387 aaPredicted RBP3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 ELOA3DA6NLF2 546 aaPredicted RBP3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 CD33P20138 364 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 SSTR4P31391 388 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 NR6A1Q15406 480 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 AMHR2Q16671 573 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 ELOA3BQ3SY89 546 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 C4orf17Q53FE4 359 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 ZNF468Q5VIY5 522 aaPredicted RBP3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 FIGNL1Q6PIW4 674 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 CYP2U1Q7Z449 544 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 ELOA3Q8NG57 546 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 LRRN4Q8WUT4 740 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 PRDM6Q9NQX0 595 aa3.29□□□□□ -1.88
SCARNA23-201ENST00000516060 M0R082 166 aa3.28□□□□□ -1.88
SCARNA23-201ENST00000516060 MAPTP10636 758 aaKnown RBP3.28□□□□□ -1.88
SCARNA23-201ENST00000516060 ALAS2P22557 587 aa3.28□□□□□ -1.88
SCARNA23-201ENST00000516060 CD97P48960 835 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms