RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 DALRD3Q5D0E6 543 aaKnown RBP12.93□□□□□ -0.34
CSNK1A1-206ENST00000515748 CNTNAP1P78357 1384 aa12.93□□□□□ -0.34
CSNK1A1-206ENST00000515748 PALLDQ8WX93 1383 aa12.93□□□□□ -0.34
CSNK1A1-206ENST00000515748 N4BP2Q86UW6 1770 aaPredicted RBP12.92□□□□□ -0.34
CSNK1A1-206ENST00000515748 NLGN1Q8N2Q7 840 aa12.92□□□□□ -0.34
CSNK1A1-206ENST00000515748 LTV1Q96GA3 475 aaPredicted RBP12.92□□□□□ -0.34
CSNK1A1-206ENST00000515748 CCDC87Q9NVE4 849 aa12.92□□□□□ -0.34
CSNK1A1-206ENST00000515748 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
CSNK1A1-206ENST00000515748 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
CSNK1A1-206ENST00000515748 TNRC6CQ9HCJ0 1690 aaKnown RBP12.91□□□□□ -0.34
CSNK1A1-206ENST00000515748 ZC3H4Q9UPT8 1303 aaKnown RBP12.9□□□□□ -0.34
CSNK1A1-206ENST00000515748 C5P01031 1676 aa12.9□□□□□ -0.34
CSNK1A1-206ENST00000515748 SMARCC1Q92922 1105 aaPredicted RBP12.9□□□□□ -0.34
CSNK1A1-206ENST00000515748 DOT1LQ8TEK3 1739 aa12.89□□□□□ -0.35
CSNK1A1-206ENST00000515748 CHADLQ6NUI6 762 aa12.89□□□□□ -0.35
CSNK1A1-206ENST00000515748 NME9Q86XW9 330 aa12.89□□□□□ -0.35
CSNK1A1-206ENST00000515748 LINC00116Q8NCU8 138 aa12.89□□□□□ -0.35
CSNK1A1-206ENST00000515748 IP6K1Q92551 441 aa12.89□□□□□ -0.35
CSNK1A1-206ENST00000515748 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
CSNK1A1-206ENST00000515748 CARD14Q9BXL6 1004 aa12.89□□□□□ -0.35
CSNK1A1-206ENST00000515748 WASHC2AQ641Q2 1341 aa12.88□□□□□ -0.35
CSNK1A1-206ENST00000515748 KIAA1551Q9HCM1 1747 aa12.88□□□□□ -0.35
CSNK1A1-206ENST00000515748 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
CSNK1A1-206ENST00000515748 GNPATO15228 680 aa12.88□□□□□ -0.35
CSNK1A1-206ENST00000515748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSNK1A1-206ENST00000515748 KIF13BQ9NQT8 1826 aa12.88□□□□□ -0.35
CSNK1A1-206ENST00000515748 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
CSNK1A1-206ENST00000515748 PKD1L3Q7Z443 1732 aa12.88□□□□□ -0.35
CSNK1A1-206ENST00000515748 TNRC18O15417 2968 aaPredicted RBP12.87□□□□□ -0.35
CSNK1A1-206ENST00000515748 LMNB1P20700 586 aa12.87□□□□□ -0.35
CSNK1A1-206ENST00000515748 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
CSNK1A1-206ENST00000515748 FYB1O15117 783 aa12.86□□□□□ -0.35
CSNK1A1-206ENST00000515748 MAP2K1Q02750 393 aaPredicted RBP12.86□□□□□ -0.35
CSNK1A1-206ENST00000515748 RASSF7Q02833 373 aa12.86□□□□□ -0.35
CSNK1A1-206ENST00000515748 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
CSNK1A1-206ENST00000515748 DPY19L2Q6NUT2 758 aa12.86□□□□□ -0.35
CSNK1A1-206ENST00000515748 CGNL1Q0VF96 1302 aa12.86□□□□□ -0.35
CSNK1A1-206ENST00000515748 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
CSNK1A1-206ENST00000515748 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
CSNK1A1-206ENST00000515748 UBR3Q6ZT12 1888 aa12.85□□□□□ -0.35
CSNK1A1-206ENST00000515748 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
CSNK1A1-206ENST00000515748 CHRNA5P30532 468 aa12.84□□□□□ -0.35
CSNK1A1-206ENST00000515748 SIK1P57059 783 aa12.84□□□□□ -0.35
CSNK1A1-206ENST00000515748 PIGBQ92521 554 aa12.84□□□□□ -0.35
CSNK1A1-206ENST00000515748 COG3Q96JB2 828 aa12.84□□□□□ -0.35
CSNK1A1-206ENST00000515748 PANK3Q9H999 370 aa12.84□□□□□ -0.35
CSNK1A1-206ENST00000515748 SBF1O95248 1867 aa12.83□□□□□ -0.36
CSNK1A1-206ENST00000515748 TMEM88BA6NKF7 163 aa12.83□□□□□ -0.36
CSNK1A1-206ENST00000515748 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
CSNK1A1-206ENST00000515748 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
CSNK1A1-206ENST00000515748 ITPK1Q13572 414 aa12.83□□□□□ -0.36
CSNK1A1-206ENST00000515748 POLR3GLQ9BT43 218 aa12.83□□□□□ -0.36
CSNK1A1-206ENST00000515748 PASKQ96RG2 1323 aa12.83□□□□□ -0.36
CSNK1A1-206ENST00000515748 KDM6AO15550 1401 aaPredicted RBP12.82□□□□□ -0.36
CSNK1A1-206ENST00000515748 GYS1P13807 737 aa12.82□□□□□ -0.36
CSNK1A1-206ENST00000515748 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
CSNK1A1-206ENST00000515748 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
CSNK1A1-206ENST00000515748 ARFGEF1Q9Y6D6 1849 aa12.82□□□□□ -0.36
CSNK1A1-206ENST00000515748 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
CSNK1A1-206ENST00000515748 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
CSNK1A1-206ENST00000515748 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
CSNK1A1-206ENST00000515748 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
CSNK1A1-206ENST00000515748 KIF20BQ96Q89 1820 aa12.81□□□□□ -0.36
CSNK1A1-206ENST00000515748 KIF24Q5T7B8 1368 aa12.81□□□□□ -0.36
CSNK1A1-206ENST00000515748 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
CSNK1A1-206ENST00000515748 MEGF6O75095 1541 aa12.8□□□□□ -0.36
CSNK1A1-206ENST00000515748 PER1O15534 1290 aaPredicted RBP12.8□□□□□ -0.36
CSNK1A1-206ENST00000515748 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
CSNK1A1-206ENST00000515748 WDR33Q9C0J8 1336 aaKnown RBP12.8□□□□□ -0.36
CSNK1A1-206ENST00000515748 RASSF10A6NK89 507 aa12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 ITGBL1O95965 494 aaPredicted RBP12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 RFC4P35249 363 aa12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 AMER1Q5JTC6 1135 aaPredicted RBP12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 PRPF38BQ5VTL8 546 aaKnown RBP12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 NBPF6Q5VWK0 638 aa12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 RAPGEF4Q8WZA2 1011 aa12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 NBPF4Q96M43 638 aa12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 MCOLN1Q9GZU1 580 aa12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 KNSTRNQ9Y448 316 aa12.79□□□□□ -0.36
CSNK1A1-206ENST00000515748 TATP17735 454 aaPredicted RBP12.78□□□□□ -0.36
CSNK1A1-206ENST00000515748 SMG6Q86US8 1419 aaKnown RBP12.78□□□□□ -0.36
CSNK1A1-206ENST00000515748 CYP27B1O15528 508 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 ADRA2BP18089 450 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 HOXC9P31274 260 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 BEGAINQ9BUH8 593 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
CSNK1A1-206ENST00000515748 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
CSNK1A1-206ENST00000515748 LTN1O94822 1766 aa12.76□□□□□ -0.37
CSNK1A1-206ENST00000515748 AMPHP49418 695 aa12.76□□□□□ -0.37
CSNK1A1-206ENST00000515748 LDHDQ86WU2 507 aa12.76□□□□□ -0.37
CSNK1A1-206ENST00000515748 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
CSNK1A1-206ENST00000515748 DDNO94850 711 aaPredicted RBP12.75□□□□□ -0.37
CSNK1A1-206ENST00000515748 C4AP0C0L4 1744 aa12.75□□□□□ -0.37
CSNK1A1-206ENST00000515748 FLT4P35916 1363 aa12.75□□□□□ -0.37
CSNK1A1-206ENST00000515748 NFKBIEO00221 500 aa12.74□□□□□ -0.37
CSNK1A1-206ENST00000515748 RPS6KA4O75676 772 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms