RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 PLEKHO1Q53GL0 409 aaPredicted RBP18.17■□□□□ 0.5
PFDN1-206ENST00000514611 SULT6B1Q6IMI4 303 aa18.17■□□□□ 0.5
PFDN1-206ENST00000514611 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
PFDN1-206ENST00000514611 FLAD1Q8NFF5 587 aa18.17■□□□□ 0.5
PFDN1-206ENST00000514611 DCAF5Q96JK2 942 aa18.16■□□□□ 0.5
PFDN1-206ENST00000514611 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
PFDN1-206ENST00000514611 HMGB2P26583 209 aaKnown RBP18.15■□□□□ 0.5
PFDN1-206ENST00000514611 AMOTQ4VCS5 1084 aa18.15■□□□□ 0.5
PFDN1-206ENST00000514611 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.49
PFDN1-206ENST00000514611 GNPATO15228 680 aa18.14■□□□□ 0.49
PFDN1-206ENST00000514611 SSFA2P28290 1259 aa18.14■□□□□ 0.49
PFDN1-206ENST00000514611 ZNF784Q8NCA9 323 aaPredicted RBP18.14■□□□□ 0.49
PFDN1-206ENST00000514611 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.49
PFDN1-206ENST00000514611 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
PFDN1-206ENST00000514611 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
PFDN1-206ENST00000514611 YBX3P16989 372 aaKnown RBP eCLIP18.12■□□□□ 0.496e-9■■□□□ 12.6
PFDN1-206ENST00000514611 MTHFSP49914 203 aa18.12■□□□□ 0.49
PFDN1-206ENST00000514611 C1orf141Q5JVX7 400 aa18.12■□□□□ 0.49
PFDN1-206ENST00000514611 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
PFDN1-206ENST00000514611 CABP4P57796 275 aa18.11■□□□□ 0.49
PFDN1-206ENST00000514611 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
PFDN1-206ENST00000514611 HMOX1P09601 288 aa18.09■□□□□ 0.49
PFDN1-206ENST00000514611 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
PFDN1-206ENST00000514611 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
PFDN1-206ENST00000514611 CHD4Q14839 1912 aa18.08■□□□□ 0.49
PFDN1-206ENST00000514611 CD2APQ9Y5K6 639 aa18.08■□□□□ 0.48
PFDN1-206ENST00000514611 NFATC2IPQ8NCF5 419 aa18.07■□□□□ 0.48
PFDN1-206ENST00000514611 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
PFDN1-206ENST00000514611 CNTNAP4Q9C0A0 1308 aa18.06■□□□□ 0.48
PFDN1-206ENST00000514611 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
PFDN1-206ENST00000514611 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
PFDN1-206ENST00000514611 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
PFDN1-206ENST00000514611 AKAP4Q5JQC9 854 aa18.05■□□□□ 0.48
PFDN1-206ENST00000514611 WWC3Q9ULE0 1092 aa18.05■□□□□ 0.48
PFDN1-206ENST00000514611 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
PFDN1-206ENST00000514611 TJP1Q07157 1748 aa18.04■□□□□ 0.48
PFDN1-206ENST00000514611 MRC1P22897 1456 aa18.04■□□□□ 0.48
PFDN1-206ENST00000514611 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
PFDN1-206ENST00000514611 CICQ96RK0 1608 aaPredicted RBP18.03■□□□□ 0.48
PFDN1-206ENST00000514611 MMP10P09238 476 aa18.03■□□□□ 0.48
PFDN1-206ENST00000514611 TRAPPC3LQ5T215 181 aa18.03■□□□□ 0.48
PFDN1-206ENST00000514611 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
PFDN1-206ENST00000514611 ARHGEF1Q92888 912 aaKnown RBP18.03■□□□□ 0.48
PFDN1-206ENST00000514611 LGR6Q9HBX8 967 aa18.03■□□□□ 0.48
PFDN1-206ENST00000514611 GRIN3BO60391 1043 aa18.02■□□□□ 0.48
PFDN1-206ENST00000514611 C4AP0C0L4 1744 aa18.02■□□□□ 0.48
PFDN1-206ENST00000514611 MTHFSDQ2M296 383 aaKnown RBP18.02■□□□□ 0.48
PFDN1-206ENST00000514611 RPS6KA4O75676 772 aa18.01■□□□□ 0.47
PFDN1-206ENST00000514611 ADRA2BP18089 450 aa18.01■□□□□ 0.47
PFDN1-206ENST00000514611 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
PFDN1-206ENST00000514611 RNMTO43148 476 aaKnown RBP18■□□□□ 0.47
PFDN1-206ENST00000514611 CRKLP46109 303 aaKnown RBP18■□□□□ 0.47
PFDN1-206ENST00000514611 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
PFDN1-206ENST00000514611 MYH14Q7Z406 1995 aaKnown RBP17.99■□□□□ 0.47
PFDN1-206ENST00000514611 GYS1P13807 737 aa17.99■□□□□ 0.47
PFDN1-206ENST00000514611 RFC4P35249 363 aa17.99■□□□□ 0.47
PFDN1-206ENST00000514611 SLC39A6Q13433 755 aa17.99■□□□□ 0.47
PFDN1-206ENST00000514611 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
PFDN1-206ENST00000514611 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
PFDN1-206ENST00000514611 KCPQ6ZWJ8 1503 aa17.98■□□□□ 0.47
PFDN1-206ENST00000514611 U2SURPO15042 1029 aaKnown RBP17.98■□□□□ 0.47
PFDN1-206ENST00000514611 DNAJC10Q8IXB1 793 aa17.97■□□□□ 0.47
PFDN1-206ENST00000514611 NLGN1Q8N2Q7 840 aa17.97■□□□□ 0.47
PFDN1-206ENST00000514611 SRP68Q9UHB9 627 aaKnown RBP17.97■□□□□ 0.47
PFDN1-206ENST00000514611 KIAA1551Q9HCM1 1747 aa17.97■□□□□ 0.47
PFDN1-206ENST00000514611 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
PFDN1-206ENST00000514611 VIRMAQ69YN4 1812 aaKnown RBP17.95■□□□□ 0.46
PFDN1-206ENST00000514611 KIF13BQ9NQT8 1826 aa17.95■□□□□ 0.46
PFDN1-206ENST00000514611 USP42Q9H9J4 1324 aaKnown RBP17.95■□□□□ 0.46
PFDN1-206ENST00000514611 ATP10DQ9P241 1426 aa17.94■□□□□ 0.46
PFDN1-206ENST00000514611 FKBP8Q14318 412 aa17.93■□□□□ 0.46
PFDN1-206ENST00000514611 CCDC87Q9NVE4 849 aa17.93■□□□□ 0.46
PFDN1-206ENST00000514611 ADCY9O60503 1353 aa17.92■□□□□ 0.46
PFDN1-206ENST00000514611 GIGYF1O75420 1035 aaPredicted RBP17.92■□□□□ 0.46
PFDN1-206ENST00000514611 C1QTNF8P60827 252 aa17.92■□□□□ 0.46
PFDN1-206ENST00000514611 PARP3Q9Y6F1 533 aa17.92■□□□□ 0.46
PFDN1-206ENST00000514611 SOS1Q07889 1333 aaPredicted RBP17.92■□□□□ 0.46
PFDN1-206ENST00000514611 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
PFDN1-206ENST00000514611 A0A0G2JLW4 131 aa17.91■□□□□ 0.46
PFDN1-206ENST00000514611 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
PFDN1-206ENST00000514611 DDR1Q08345 913 aa17.91■□□□□ 0.46
PFDN1-206ENST00000514611 GAS2L2Q8NHY3 880 aa17.91■□□□□ 0.46
PFDN1-206ENST00000514611 ZBTB1Q9Y2K1 713 aa17.91■□□□□ 0.46
PFDN1-206ENST00000514611 UBR2Q8IWV8 1755 aa17.91■□□□□ 0.46
PFDN1-206ENST00000514611 TGFB2P61812 414 aa17.9■□□□□ 0.46
PFDN1-206ENST00000514611 IL17REQ8NFR9 667 aa17.9■□□□□ 0.46
PFDN1-206ENST00000514611 COL15A1P39059 1388 aa17.9■□□□□ 0.46
PFDN1-206ENST00000514611 DPEP1P16444 411 aa17.89■□□□□ 0.45
PFDN1-206ENST00000514611 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
PFDN1-206ENST00000514611 PRKAR2BP31323 418 aa17.89■□□□□ 0.45
PFDN1-206ENST00000514611 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
PFDN1-206ENST00000514611 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
PFDN1-206ENST00000514611 RSPH6AQ9H0K4 717 aa17.89■□□□□ 0.45
PFDN1-206ENST00000514611 BCS1LQ9Y276 419 aa17.89■□□□□ 0.45
PFDN1-206ENST00000514611 GNAT3A8MTJ3 354 aa17.88■□□□□ 0.45
PFDN1-206ENST00000514611 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
PFDN1-206ENST00000514611 SENP3-EIF4A1A0A087X0R7 540 aa17.87■□□□□ 0.45
PFDN1-206ENST00000514611 TEFQ10587 303 aa17.87■□□□□ 0.45
PFDN1-206ENST00000514611 TTC5Q8N0Z6 440 aa17.87■□□□□ 0.45
PFDN1-206ENST00000514611 VSIG10Q8N0Z9 540 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms