RNA–Protein interactions for RNA: ENST00000514528.5

MATR3-225, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-225ENST00000514528 KIF3CO14782 793 aa23.49■■□□□ 1.35
MATR3-225ENST00000514528 PPM1GO15355 546 aaPredicted RBP23.49■■□□□ 1.35
MATR3-225ENST00000514528 ATP6V1AP38606 617 aa23.49■■□□□ 1.35
MATR3-225ENST00000514528 SLC4A9Q96Q91 983 aa23.49■■□□□ 1.35
MATR3-225ENST00000514528 EIF4A2Q14240 407 aaKnown RBP23.48■■□□□ 1.35
MATR3-225ENST00000514528 MMP10P09238 476 aa23.47■■□□□ 1.35
MATR3-225ENST00000514528 ZNF831Q5JPB2 1677 aa23.47■■□□□ 1.35
MATR3-225ENST00000514528 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
MATR3-225ENST00000514528 C10orf71Q711Q0 1435 aa23.46■■□□□ 1.35
MATR3-225ENST00000514528 ZNF526Q8TF50 670 aaPredicted RBP23.46■■□□□ 1.35
MATR3-225ENST00000514528 WWC3Q9ULE0 1092 aa23.46■■□□□ 1.35
MATR3-225ENST00000514528 KIF13BQ9NQT8 1826 aa23.45■■□□□ 1.34
MATR3-225ENST00000514528 TGFB2P61812 414 aa23.45■■□□□ 1.34
MATR3-225ENST00000514528 RC3H1Q5TC82 1133 aaKnown RBP23.45■■□□□ 1.34
MATR3-225ENST00000514528 ERVV-2B6SEH9 535 aa23.44■■□□□ 1.34
MATR3-225ENST00000514528 ADRA2BP18089 450 aa23.43■■□□□ 1.34
MATR3-225ENST00000514528 NLGN1Q8N2Q7 840 aa23.43■■□□□ 1.34
MATR3-225ENST00000514528 CNTNAP4Q9C0A0 1308 aa23.42■■□□□ 1.34
MATR3-225ENST00000514528 TIMELESSQ9UNS1 1208 aa23.42■■□□□ 1.34
MATR3-225ENST00000514528 RTCBQ9Y3I0 505 aaKnown RBP23.42■■□□□ 1.34
MATR3-225ENST00000514528 TRAPPC3LQ5T215 181 aa23.41■■□□□ 1.34
MATR3-225ENST00000514528 DCAF5Q96JK2 942 aa23.41■■□□□ 1.34
MATR3-225ENST00000514528 KDM6AO15550 1401 aaPredicted RBP23.41■■□□□ 1.34
MATR3-225ENST00000514528 GYS1P13807 737 aa23.4■■□□□ 1.34
MATR3-225ENST00000514528 ARHGEF1Q92888 912 aaKnown RBP23.4■■□□□ 1.34
MATR3-225ENST00000514528 RPS6KA4O75676 772 aa23.38■■□□□ 1.33
MATR3-225ENST00000514528 HSP90AB1P08238 724 aaKnown RBP23.38■■□□□ 1.33
MATR3-225ENST00000514528 COL5A3P25940 1745 aaPredicted RBP23.37■■□□□ 1.33
MATR3-225ENST00000514528 A0A0G2JLW4 131 aa23.37■■□□□ 1.33
MATR3-225ENST00000514528 KCNA3P22001 575 aa23.36■■□□□ 1.33
MATR3-225ENST00000514528 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
MATR3-225ENST00000514528 DPEP1P16444 411 aa23.35■■□□□ 1.33
MATR3-225ENST00000514528 BCS1LQ9Y276 419 aa23.35■■□□□ 1.33
MATR3-225ENST00000514528 RBM42Q9BTD8 480 aaKnown RBP23.34■■□□□ 1.33
MATR3-225ENST00000514528 CCDC87Q9NVE4 849 aa23.34■■□□□ 1.33
MATR3-225ENST00000514528 TOMM70O94826 608 aa23.33■■□□□ 1.33
MATR3-225ENST00000514528 TNNT2P45379 298 aaPredicted RBP23.33■■□□□ 1.33
MATR3-225ENST00000514528 AMOTQ4VCS5 1084 aa23.33■■□□□ 1.33
MATR3-225ENST00000514528 PLEKHO1Q53GL0 409 aaPredicted RBP23.33■■□□□ 1.33
MATR3-225ENST00000514528 DNAJC5GQ8N7S2 189 aa23.33■■□□□ 1.33
MATR3-225ENST00000514528 APLP1P51693 650 aa23.32■■□□□ 1.32
MATR3-225ENST00000514528 RFC4P35249 363 aa23.31■■□□□ 1.32
MATR3-225ENST00000514528 ZNF530Q6P9A1 599 aaPredicted RBP23.31■■□□□ 1.32
MATR3-225ENST00000514528 N4BP2Q86UW6 1770 aaPredicted RBP23.31■■□□□ 1.32
MATR3-225ENST00000514528 PARP3Q9Y6F1 533 aa23.3■■□□□ 1.32
MATR3-225ENST00000514528 BRCA1P38398 1863 aaKnown RBP23.3■■□□□ 1.32
MATR3-225ENST00000514528 CABP4P57796 275 aa23.29■■□□□ 1.32
MATR3-225ENST00000514528 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
MATR3-225ENST00000514528 AEBP1Q8IUX7 1158 aa23.29■■□□□ 1.32
MATR3-225ENST00000514528 MYH14Q7Z406 1995 aaKnown RBP23.29■■□□□ 1.32
MATR3-225ENST00000514528 FCHSD2O94868 740 aa23.28■■□□□ 1.32
MATR3-225ENST00000514528 CRKLP46109 303 aaKnown RBP23.28■■□□□ 1.32
MATR3-225ENST00000514528 ARHGAP27Q6ZUM4 889 aa23.28■■□□□ 1.32
MATR3-225ENST00000514528 NMRK2Q9NPI5 230 aa23.28■■□□□ 1.32
MATR3-225ENST00000514528 USP42Q9H9J4 1324 aaKnown RBP23.28■■□□□ 1.32
MATR3-225ENST00000514528 DDR1Q08345 913 aa23.27■■□□□ 1.32
MATR3-225ENST00000514528 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
MATR3-225ENST00000514528 MTHFSP49914 203 aa23.26■■□□□ 1.31
MATR3-225ENST00000514528 FKBP8Q14318 412 aa23.26■■□□□ 1.31
MATR3-225ENST00000514528 PANK3Q9H999 370 aa23.26■■□□□ 1.31
MATR3-225ENST00000514528 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
MATR3-225ENST00000514528 PTCD1O75127 700 aaKnown RBP23.25■■□□□ 1.31
MATR3-225ENST00000514528 NFATC2IPQ8NCF5 419 aa23.25■■□□□ 1.31
MATR3-225ENST00000514528 PIM2Q9P1W9 311 aa23.25■■□□□ 1.31
MATR3-225ENST00000514528 SRP68Q9UHB9 627 aaKnown RBP23.25■■□□□ 1.31
MATR3-225ENST00000514528 C9orf131Q5VYM1 1079 aa23.24■■□□□ 1.31
MATR3-225ENST00000514528 INTS5Q6P9B9 1019 aaKnown RBP23.24■■□□□ 1.31
MATR3-225ENST00000514528 RBM46Q8TBY0 533 aaKnown RBP23.24■■□□□ 1.31
MATR3-225ENST00000514528 TJP1Q07157 1748 aa23.24■■□□□ 1.31
MATR3-225ENST00000514528 TM4SF1P30408 202 aa23.23■■□□□ 1.31
MATR3-225ENST00000514528 IL13P35225 146 aa23.22■■□□□ 1.31
MATR3-225ENST00000514528 C1orf141Q5JVX7 400 aa23.22■■□□□ 1.31
MATR3-225ENST00000514528 ARFGEF1Q9Y6D6 1849 aa23.22■■□□□ 1.31
MATR3-225ENST00000514528 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
MATR3-225ENST00000514528 DALRD3Q5D0E6 543 aaKnown RBP23.21■■□□□ 1.31
MATR3-225ENST00000514528 SULT6B1Q6IMI4 303 aa23.2■■□□□ 1.3
MATR3-225ENST00000514528 POLR3GLQ9BT43 218 aa23.2■■□□□ 1.3
MATR3-225ENST00000514528 MRC1P22897 1456 aa23.19■■□□□ 1.3
MATR3-225ENST00000514528 HSPA5P11021 654 aaKnown RBP23.19■■□□□ 1.3
MATR3-225ENST00000514528 SOS1Q07889 1333 aaPredicted RBP23.18■■□□□ 1.3
MATR3-225ENST00000514528 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
MATR3-225ENST00000514528 CHRNA5P30532 468 aa23.17■■□□□ 1.3
MATR3-225ENST00000514528 FSTL1Q12841 308 aa23.17■■□□□ 1.3
MATR3-225ENST00000514528 AKAP4Q5JQC9 854 aa23.17■■□□□ 1.3
MATR3-225ENST00000514528 MORC1Q86VD1 984 aa23.17■■□□□ 1.3
MATR3-225ENST00000514528 KCPQ6ZWJ8 1503 aa23.17■■□□□ 1.3
MATR3-225ENST00000514528 SLC52A2Q9HAB3 445 aa23.16■■□□□ 1.3
MATR3-225ENST00000514528 DNAJC10Q8IXB1 793 aa23.15■■□□□ 1.3
MATR3-225ENST00000514528 JMYQ8N9B5 988 aa23.15■■□□□ 1.3
MATR3-225ENST00000514528 KDM2BQ8NHM5 1336 aa23.14■■□□□ 1.3
MATR3-225ENST00000514528 CYP19A1P11511 503 aaPredicted RBP23.14■■□□□ 1.29
MATR3-225ENST00000514528 RNF181Q9P0P0 153 aa23.14■■□□□ 1.29
MATR3-225ENST00000514528 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
MATR3-225ENST00000514528 WDR90Q96KV7 1748 aa23.13■■□□□ 1.29
MATR3-225ENST00000514528 ZC3H4Q9UPT8 1303 aaKnown RBP23.13■■□□□ 1.29
MATR3-225ENST00000514528 USPL1Q5W0Q7 1092 aa23.13■■□□□ 1.29
MATR3-225ENST00000514528 LGR6Q9HBX8 967 aa23.13■■□□□ 1.29
MATR3-225ENST00000514528 PCNTO95613 3336 aa23.13■■□□□ 1.29
MATR3-225ENST00000514528 AMER1Q5JTC6 1135 aaPredicted RBP23.12■■□□□ 1.29
MATR3-225ENST00000514528 KLRG1Q96E93 195 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms