RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ITPK1Q13572 414 aa14.18□□□□□ -0.14
HMGXB3-205ENST00000514469 AMIGO3Q86WK7 504 aa14.18□□□□□ -0.14
HMGXB3-205ENST00000514469 COL5A3P25940 1745 aaPredicted RBP14.18□□□□□ -0.14
HMGXB3-205ENST00000514469 MRC1P22897 1456 aa14.18□□□□□ -0.14
HMGXB3-205ENST00000514469 ADAMTS7Q9UKP4 1686 aa14.17□□□□□ -0.14
HMGXB3-205ENST00000514469 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
HMGXB3-205ENST00000514469 DCAF8L1A6NGE4 600 aa14.17□□□□□ -0.14
HMGXB3-205ENST00000514469 MSH5O43196 834 aa14.17□□□□□ -0.14
HMGXB3-205ENST00000514469 DIAPH1O60610 1272 aaKnown RBP14.17□□□□□ -0.14
HMGXB3-205ENST00000514469 C1orf141Q5JVX7 400 aa14.17□□□□□ -0.14
HMGXB3-205ENST00000514469 UTRNP46939 3433 aa14.16□□□□□ -0.14
HMGXB3-205ENST00000514469 SSFA2P28290 1259 aa14.16□□□□□ -0.14
HMGXB3-205ENST00000514469 ATP6V1AP38606 617 aa14.16□□□□□ -0.14
HMGXB3-205ENST00000514469 HMOX1P09601 288 aa14.15□□□□□ -0.14
HMGXB3-205ENST00000514469 CABP4P57796 275 aa14.15□□□□□ -0.14
HMGXB3-205ENST00000514469 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
HMGXB3-205ENST00000514469 SLC4A9Q96Q91 983 aa14.15□□□□□ -0.14
HMGXB3-205ENST00000514469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.14□□□□□ -0.15
HMGXB3-205ENST00000514469 PHF14O94880 888 aa14.14□□□□□ -0.15
HMGXB3-205ENST00000514469 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
HMGXB3-205ENST00000514469 TJP1Q07157 1748 aa14.14□□□□□ -0.15
HMGXB3-205ENST00000514469 GNPATO15228 680 aa14.13□□□□□ -0.15
HMGXB3-205ENST00000514469 YY1P25490 414 aa14.13□□□□□ -0.15
HMGXB3-205ENST00000514469 CNTNAP4Q9C0A0 1308 aa14.13□□□□□ -0.15
HMGXB3-205ENST00000514469 CNGB1Q14028 1251 aaPredicted RBP14.12□□□□□ -0.15
HMGXB3-205ENST00000514469 SMIM5Q71RC9 77 aa14.12□□□□□ -0.15
HMGXB3-205ENST00000514469 KLHL34Q8N239 644 aa14.12□□□□□ -0.15
HMGXB3-205ENST00000514469 NLGN2Q8NFZ4 835 aa14.12□□□□□ -0.15
HMGXB3-205ENST00000514469 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
HMGXB3-205ENST00000514469 MTHFSDQ2M296 383 aaKnown RBP14.11□□□□□ -0.15
HMGXB3-205ENST00000514469 NFATC2IPQ8NCF5 419 aa14.11□□□□□ -0.15
HMGXB3-205ENST00000514469 GOLGB1Q14789 3259 aaKnown RBP14.11□□□□□ -0.15
HMGXB3-205ENST00000514469 KCPQ6ZWJ8 1503 aa14.1□□□□□ -0.15
HMGXB3-205ENST00000514469 RC3H1Q5TC82 1133 aaKnown RBP14.1□□□□□ -0.15
HMGXB3-205ENST00000514469 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
HMGXB3-205ENST00000514469 C4AP0C0L4 1744 aa14.1□□□□□ -0.15
HMGXB3-205ENST00000514469 VIRMAQ69YN4 1812 aaKnown RBP14.09□□□□□ -0.15
HMGXB3-205ENST00000514469 U2SURPO15042 1029 aaKnown RBP14.09□□□□□ -0.15
HMGXB3-205ENST00000514469 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
HMGXB3-205ENST00000514469 LGR6Q9HBX8 967 aa14.09□□□□□ -0.15
HMGXB3-205ENST00000514469 PTCD1O75127 700 aaKnown RBP14.08□□□□□ -0.16
HMGXB3-205ENST00000514469 ADRA2BP18089 450 aa14.08□□□□□ -0.16
HMGXB3-205ENST00000514469 RTCBQ9Y3I0 505 aaKnown RBP14.08□□□□□ -0.16
HMGXB3-205ENST00000514469 CD2APQ9Y5K6 639 aa14.08□□□□□ -0.16
HMGXB3-205ENST00000514469 UBR2Q8IWV8 1755 aa14.08□□□□□ -0.16
HMGXB3-205ENST00000514469 PPP2R1AP30153 589 aa14.07□□□□□ -0.16
HMGXB3-205ENST00000514469 CFAP53Q96M91 514 aa14.07□□□□□ -0.16
HMGXB3-205ENST00000514469 RPS6KA4O75676 772 aa14.06□□□□□ -0.16
HMGXB3-205ENST00000514469 CRKLP46109 303 aaKnown RBP14.06□□□□□ -0.16
HMGXB3-205ENST00000514469 GPR162Q16538 588 aa14.06□□□□□ -0.16
HMGXB3-205ENST00000514469 TRAPPC3LQ5T215 181 aa14.06□□□□□ -0.16
HMGXB3-205ENST00000514469 SIPA1L3O60292 1781 aaPredicted RBP14.06□□□□□ -0.16
HMGXB3-205ENST00000514469 GAS2L2Q8NHY3 880 aa14.05□□□□□ -0.16
HMGXB3-205ENST00000514469 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
HMGXB3-205ENST00000514469 RSPH6AQ9H0K4 717 aa14.05□□□□□ -0.16
HMGXB3-205ENST00000514469 MYH14Q7Z406 1995 aaKnown RBP14.05□□□□□ -0.16
HMGXB3-205ENST00000514469 YBX3P16989 372 aaKnown RBP eCLIP14.04□□□□□ -0.16
HMGXB3-205ENST00000514469 KIAA1551Q9HCM1 1747 aa14.04□□□□□ -0.16
HMGXB3-205ENST00000514469 KIF13BQ9NQT8 1826 aa14.04□□□□□ -0.16
HMGXB3-205ENST00000514469 MMP10P09238 476 aa14.03□□□□□ -0.16
HMGXB3-205ENST00000514469 GYS1P13807 737 aa14.03□□□□□ -0.16
HMGXB3-205ENST00000514469 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
HMGXB3-205ENST00000514469 SLC39A6Q13433 755 aa14.03□□□□□ -0.16
HMGXB3-205ENST00000514469 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
HMGXB3-205ENST00000514469 CEMIPQ8WUJ3 1361 aa14.03□□□□□ -0.16
HMGXB3-205ENST00000514469 C10orf71Q711Q0 1435 aa14.03□□□□□ -0.16
HMGXB3-205ENST00000514469 CHD4Q14839 1912 aa14.02□□□□□ -0.16
HMGXB3-205ENST00000514469 GNAT3A8MTJ3 354 aa14.02□□□□□ -0.17
HMGXB3-205ENST00000514469 INTS5Q6P9B9 1019 aaKnown RBP14.02□□□□□ -0.17
HMGXB3-205ENST00000514469 DNAJC10Q8IXB1 793 aa14.02□□□□□ -0.17
HMGXB3-205ENST00000514469 VSIG10Q8N0Z9 540 aa14.02□□□□□ -0.17
HMGXB3-205ENST00000514469 NLGN1Q8N2Q7 840 aa14.02□□□□□ -0.17
HMGXB3-205ENST00000514469 PHACTR3Q96KR7 559 aa14.02□□□□□ -0.17
HMGXB3-205ENST00000514469 NUDCQ9Y266 331 aa14.02□□□□□ -0.17
HMGXB3-205ENST00000514469 USP42Q9H9J4 1324 aaKnown RBP14.01□□□□□ -0.17
HMGXB3-205ENST00000514469 RFC4P35249 363 aa14.01□□□□□ -0.17
HMGXB3-205ENST00000514469 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
HMGXB3-205ENST00000514469 CCDC87Q9NVE4 849 aa14.01□□□□□ -0.17
HMGXB3-205ENST00000514469 PXDNLA1KZ92 1463 aa14□□□□□ -0.17
HMGXB3-205ENST00000514469 SOS1Q07889 1333 aaPredicted RBP14□□□□□ -0.17
HMGXB3-205ENST00000514469 CYP19A1P11511 503 aaPredicted RBP14□□□□□ -0.17
HMGXB3-205ENST00000514469 ZNF784Q8NCA9 323 aaPredicted RBP14□□□□□ -0.17
HMGXB3-205ENST00000514469 COL15A1P39059 1388 aa13.99□□□□□ -0.17
HMGXB3-205ENST00000514469 GRIN3BO60391 1043 aa13.99□□□□□ -0.17
HMGXB3-205ENST00000514469 FCHSD2O94868 740 aa13.99□□□□□ -0.17
HMGXB3-205ENST00000514469 U2AF1L5P0DN76 240 aaPredicted RBP13.99□□□□□ -0.17
HMGXB3-205ENST00000514469 U2AF1Q01081 240 aaKnown RBP eCLIP13.99□□□□□ -0.17
HMGXB3-205ENST00000514469 TEFQ10587 303 aa13.99□□□□□ -0.17
HMGXB3-205ENST00000514469 TTC5Q8N0Z6 440 aa13.99□□□□□ -0.17
HMGXB3-205ENST00000514469 SRP68Q9UHB9 627 aaKnown RBP13.99□□□□□ -0.17
HMGXB3-205ENST00000514469 ZNF790Q6PG37 636 aa13.98□□□□□ -0.17
HMGXB3-205ENST00000514469 ZBTB1Q9Y2K1 713 aa13.98□□□□□ -0.17
HMGXB3-205ENST00000514469 HEG1Q9ULI3 1381 aa13.97□□□□□ -0.17
HMGXB3-205ENST00000514469 ZNF496Q96IT1 587 aaPredicted RBP13.97□□□□□ -0.17
HMGXB3-205ENST00000514469 SCN7AQ01118 1682 aa13.96□□□□□ -0.17
HMGXB3-205ENST00000514469 FKBP8Q14318 412 aa13.96□□□□□ -0.17
HMGXB3-205ENST00000514469 PARP3Q9Y6F1 533 aa13.96□□□□□ -0.17
HMGXB3-205ENST00000514469 TGFB2P61812 414 aa13.95□□□□□ -0.18
HMGXB3-205ENST00000514469 DDR1Q08345 913 aa13.95□□□□□ -0.18
HMGXB3-205ENST00000514469 N4BP2Q86UW6 1770 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms