RNA–Protein interactions for RNA: ENST00000513800.5

DCUN1D4-222, Transcript of defective in cullin neddylation 1 domain containing 4, human

TSL 2

Gene DCUN1D4, Length 949 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCUN1D4-222	ENST00000513800	ATP6V1A	P38606	617 aa		33.79	■■■■□ 3
DCUN1D4-222	ENST00000513800	C4B	P0C0L5	1744 aa		33.78	■■■■□ 3
DCUN1D4-222	ENST00000513800	NUDC	Q9Y266	331 aa		33.77	■■■■□ 3
DCUN1D4-222	ENST00000513800	COL23A1	Q86Y22	540 aa	Predicted RBP	33.76	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	PPP2R1A	P30153	589 aa		33.74	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	NFATC2IP	Q8NCF5	419 aa		33.73	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	RBM42	Q9BTD8	480 aa	Known RBP	33.73	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.73	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	LINC00116	Q8NCU8	138 aa		33.72	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	SSFA2	P28290	1259 aa		33.71	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	MTHFSD	Q2M296	383 aa	Known RBP	33.71	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	ITPK1	Q13572	414 aa		33.7	■■■□□ 2.99
DCUN1D4-222	ENST00000513800	MAP3K5	Q99683	1374 aa		33.7	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	SCN11A	Q9UI33	1791 aa		33.7	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	ZNF831	Q5JPB2	1677 aa		33.69	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	GAS2L2	Q8NHY3	880 aa		33.69	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	SYT17	Q9BSW7	474 aa		33.69	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	SLC52A2	Q9HAB3	445 aa		33.68	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	COL24A1	Q17RW2	1714 aa		33.67	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	RNMT	O43148	476 aa	Known RBP	33.67	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.66	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	GNPAT	O15228	680 aa		33.66	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	PHF14	O94880	888 aa		33.66	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	LGR6	Q9HBX8	967 aa		33.64	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	UBR3	Q6ZT12	1888 aa		33.64	■■■□□ 2.98
DCUN1D4-222	ENST00000513800	MRC1	P22897	1456 aa		33.63	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	PTCD1	O75127	700 aa	Known RBP	33.63	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	RC3H1	Q5TC82	1133 aa	Known RBP	33.63	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.62	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.62	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	RTCB	Q9Y3I0	505 aa	Known RBP	33.62	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	MSL1	Q68DK7	614 aa		33.61	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	KLHL34	Q8N239	644 aa		33.61	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	SLC4A9	Q96Q91	983 aa		33.61	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	CNTNAP4	Q9C0A0	1308 aa		33.6	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	GNAT3	A8MTJ3	354 aa		33.6	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	PRKAR2B	P31323	418 aa		33.6	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	RSPH6A	Q9H0K4	717 aa		33.59	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	ADAMTS7	Q9UKP4	1686 aa		33.58	■■■□□ 2.97
DCUN1D4-222	ENST00000513800	FCHSD2	O94868	740 aa		33.57	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	ADRA2B	P18089	450 aa		33.57	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	AMIGO3	Q86WK7	504 aa		33.57	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	TEF	Q10587	303 aa		33.56	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	TRAPPC3L	Q5T215	181 aa		33.56	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	COL5A3	P25940	1745 aa	Predicted RBP	33.55	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	RALBP1	Q15311	655 aa		33.53	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	VIRMA	Q69YN4	1812 aa	Known RBP	33.53	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	RPS6KA4	O75676	772 aa		33.52	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	NEFM	P07197	916 aa		33.52	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	CIC	Q96RK0	1608 aa	Predicted RBP	33.52	■■■□□ 2.96
DCUN1D4-222	ENST00000513800	ZEB1	P37275	1124 aa	Predicted RBP	33.51	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	DDX10	Q13206	875 aa	Known RBP	33.51	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	SMIM5	Q71RC9	77 aa		33.51	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	TTC5	Q8N0Z6	440 aa		33.51	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	CRKL	P46109	303 aa	Known RBP	33.5	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	PHACTR3	Q96KR7	559 aa		33.5	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	SLC39A6	Q13433	755 aa		33.49	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	RFC4	P35249	363 aa		33.48	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	RTF1	Q92541	710 aa	Known RBP	33.48	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	VSIG10	Q8N0Z9	540 aa		33.47	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	IL17RE	Q8NFR9	667 aa		33.47	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	CD2AP	Q9Y5K6	639 aa		33.47	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	ARHGEF1	Q92888	912 aa	Known RBP	33.46	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	TJP1	Q07157	1748 aa		33.45	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	NLGN1	Q8N2Q7	840 aa		33.45	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	PNN	Q9H307	717 aa	Known RBP	33.45	■■■□□ 2.95
DCUN1D4-222	ENST00000513800	DNAJC10	Q8IXB1	793 aa		33.44	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	CEMIP	Q8WUJ3	1361 aa		33.44	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	KCP	Q6ZWJ8	1503 aa		33.43	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	YY1	P25490	414 aa		33.43	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	GPR162	Q16538	588 aa		33.43	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	CCDC87	Q9NVE4	849 aa		33.42	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	ZNF790	Q6PG37	636 aa		33.41	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	NLGN2	Q8NFZ4	835 aa		33.41	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	MYH14	Q7Z406	1995 aa	Known RBP	33.41	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	HTATSF1	O43719	755 aa	Known RBP	33.4	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	CYP19A1	P11511	503 aa	Predicted RBP	33.39	■■■□□ 2.94
DCUN1D4-222	ENST00000513800	STARD3NL	O95772	234 aa		33.38	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	MMP10	P09238	476 aa		33.38	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	INTS5	Q6P9B9	1019 aa	Known RBP	33.38	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.38	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	UBR2	Q8IWV8	1755 aa		33.38	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	PELP1	Q8IZL8	1130 aa	Known RBP	33.37	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.36	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	BTBD11	A6QL63	1104 aa		33.36	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	GYS1	P13807	737 aa		33.36	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	SIPA1L3	O60292	1781 aa	Predicted RBP	33.36	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	UTRN	P46939	3433 aa		33.35	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	FMNL2	Q96PY5	1086 aa		33.35	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	HEG1	Q9ULI3	1381 aa		33.34	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	USP42	Q9H9J4	1324 aa	Known RBP	33.33	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	MAPK8IP3	Q9UPT6	1336 aa		33.33	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	ZNF496	Q96IT1	587 aa	Predicted RBP	33.33	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	C4A	P0C0L4	1744 aa		33.33	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	SOS1	Q07889	1333 aa	Predicted RBP	33.32	■■■□□ 2.93
DCUN1D4-222	ENST00000513800	ZPR1	O75312	459 aa		33.32	■■■□□ 2.92
DCUN1D4-222	ENST00000513800	MCM10	Q7L590	875 aa		33.32	■■■□□ 2.92
DCUN1D4-222	ENST00000513800	PARP3	Q9Y6F1	533 aa		33.31	■■■□□ 2.92
DCUN1D4-222	ENST00000513800	GRIN3B	O60391	1043 aa		33.3	■■■□□ 2.92
DCUN1D4-222	ENST00000513800	PLEKHF1	Q96S99	279 aa		33.29	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms