RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
RNF4-218ENST00000513284 FCHSD2O94868 740 aa15.85■□□□□ 0.13
RNF4-218ENST00000513284 TESK2Q96S53 571 aa15.85■□□□□ 0.13
RNF4-218ENST00000513284 GGNBP2Q9H3C7 697 aa15.85■□□□□ 0.13
RNF4-218ENST00000513284 RRAGCQ9HB90 399 aa15.85■□□□□ 0.13
RNF4-218ENST00000513284 INSRP06213 1382 aa15.85■□□□□ 0.13
RNF4-218ENST00000513284 ATP6V1AP38606 617 aa15.84■□□□□ 0.13
RNF4-218ENST00000513284 SLC4A9Q96Q91 983 aa15.84■□□□□ 0.13
RNF4-218ENST00000513284 ATG3Q9NT62 314 aa15.84■□□□□ 0.13
RNF4-218ENST00000513284 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
RNF4-218ENST00000513284 TMF1P82094 1093 aa15.83■□□□□ 0.12
RNF4-218ENST00000513284 NLGN1Q8N2Q7 840 aa15.83■□□□□ 0.12
RNF4-218ENST00000513284 ARHGEF1Q92888 912 aaKnown RBP15.83■□□□□ 0.12
RNF4-218ENST00000513284 C16orf71Q8IYS4 520 aaPredicted RBP15.82■□□□□ 0.12
RNF4-218ENST00000513284 KCPQ6ZWJ8 1503 aa15.82■□□□□ 0.12
RNF4-218ENST00000513284 BRCA1P38398 1863 aaKnown RBP15.82■□□□□ 0.12
RNF4-218ENST00000513284 GYS1P13807 737 aa15.81■□□□□ 0.12
RNF4-218ENST00000513284 TRAPPC3LQ5T215 181 aa15.81■□□□□ 0.12
RNF4-218ENST00000513284 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
RNF4-218ENST00000513284 CCDC87Q9NVE4 849 aa15.79■□□□□ 0.12
RNF4-218ENST00000513284 TMOD3Q9NYL9 352 aa15.79■□□□□ 0.12
RNF4-218ENST00000513284 RTCBQ9Y3I0 505 aaKnown RBP15.79■□□□□ 0.12
RNF4-218ENST00000513284 PKD1L3Q7Z443 1732 aa15.79■□□□□ 0.12
RNF4-218ENST00000513284 NCAPD2Q15021 1401 aa15.78■□□□□ 0.12
RNF4-218ENST00000513284 SMG6Q86US8 1419 aaKnown RBP15.78■□□□□ 0.12
RNF4-218ENST00000513284 ST20-MTHFSA0A0A6YYL1 179 aa15.78■□□□□ 0.12
RNF4-218ENST00000513284 HSPA1AP0DMV8 641 aaKnown RBP15.78■□□□□ 0.12
RNF4-218ENST00000513284 HSPA1BP0DMV9 641 aaKnown RBP15.78■□□□□ 0.12
RNF4-218ENST00000513284 RNF181Q9P0P0 153 aa15.78■□□□□ 0.12
RNF4-218ENST00000513284 PLEKHG2Q9H7P9 1386 aa15.77■□□□□ 0.12
RNF4-218ENST00000513284 KDM2BQ8NHM5 1336 aa15.77■□□□□ 0.12
RNF4-218ENST00000513284 RC3H1Q5TC82 1133 aaKnown RBP15.77■□□□□ 0.12
RNF4-218ENST00000513284 PIM2Q9P1W9 311 aa15.77■□□□□ 0.12
RNF4-218ENST00000513284 SPG7Q9UQ90 795 aa15.77■□□□□ 0.12
RNF4-218ENST00000513284 EMILIN1Q9Y6C2 1016 aa15.77■□□□□ 0.12
RNF4-218ENST00000513284 FLT4P35916 1363 aa15.76■□□□□ 0.11
RNF4-218ENST00000513284 ARFGEF1Q9Y6D6 1849 aa15.76■□□□□ 0.11
RNF4-218ENST00000513284 PHKG2P15735 406 aa15.76■□□□□ 0.11
RNF4-218ENST00000513284 SMC1BQ8NDV3 1235 aa15.76■□□□□ 0.11
RNF4-218ENST00000513284 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
RNF4-218ENST00000513284 KDRP35968 1356 aa15.75■□□□□ 0.11
RNF4-218ENST00000513284 RPS6KA4O75676 772 aa15.75■□□□□ 0.11
RNF4-218ENST00000513284 CHRNA5P30532 468 aa15.75■□□□□ 0.11
RNF4-218ENST00000513284 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
RNF4-218ENST00000513284 EYA1Q99502 592 aa15.75■□□□□ 0.11
RNF4-218ENST00000513284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.75■□□□□ 0.115e-8■□□□□ 9.7
RNF4-218ENST00000513284 PARP3Q9Y6F1 533 aa15.75■□□□□ 0.11
RNF4-218ENST00000513284 SBF1O95248 1867 aa15.75■□□□□ 0.11
RNF4-218ENST00000513284 KIF24Q5T7B8 1368 aa15.75■□□□□ 0.11
RNF4-218ENST00000513284 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
RNF4-218ENST00000513284 ADRA2BP18089 450 aa15.74■□□□□ 0.11
RNF4-218ENST00000513284 DDR1Q08345 913 aa15.74■□□□□ 0.11
RNF4-218ENST00000513284 RFC4P35249 363 aa15.73■□□□□ 0.11
RNF4-218ENST00000513284 FKBP8Q14318 412 aa15.73■□□□□ 0.11
RNF4-218ENST00000513284 IFNL2Q8IZJ0 200 aa15.73■□□□□ 0.11
RNF4-218ENST00000513284 CARD14Q9BXL6 1004 aa15.73■□□□□ 0.11
RNF4-218ENST00000513284 MYH14Q7Z406 1995 aaKnown RBP15.73■□□□□ 0.11
RNF4-218ENST00000513284 SRP68Q9UHB9 627 aaKnown RBP15.72■□□□□ 0.11
RNF4-218ENST00000513284 CNTNAP4Q9C0A0 1308 aa15.71■□□□□ 0.11
RNF4-218ENST00000513284 POTECB2RU33 542 aa15.71■□□□□ 0.11
RNF4-218ENST00000513284 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
RNF4-218ENST00000513284 TM4SF1P30408 202 aa15.7■□□□□ 0.1
RNF4-218ENST00000513284 RASSF7Q02833 373 aa15.7■□□□□ 0.1
RNF4-218ENST00000513284 WASHC2AQ641Q2 1341 aa15.69■□□□□ 0.1
RNF4-218ENST00000513284 KDM6AO15550 1401 aaPredicted RBP15.69■□□□□ 0.1
RNF4-218ENST00000513284 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
RNF4-218ENST00000513284 VEGFAP15692 232 aaPredicted RBP15.69■□□□□ 0.1
RNF4-218ENST00000513284 TNRC6CQ9HCJ0 1690 aaKnown RBP15.69■□□□□ 0.1
RNF4-218ENST00000513284 ZNF831Q5JPB2 1677 aa15.68■□□□□ 0.1
RNF4-218ENST00000513284 ERVV-2B6SEH9 535 aa15.68■□□□□ 0.1
RNF4-218ENST00000513284 PPM1GO15355 546 aaPredicted RBP15.68■□□□□ 0.1
RNF4-218ENST00000513284 SLC34A2O95436 690 aa15.68■□□□□ 0.1
RNF4-218ENST00000513284 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
RNF4-218ENST00000513284 POLRMTO00411 1230 aaKnown RBP15.67■□□□□ 0.1
RNF4-218ENST00000513284 USP42Q9H9J4 1324 aaKnown RBP15.67■□□□□ 0.1
RNF4-218ENST00000513284 LMNB1P20700 586 aa15.65■□□□□ 0.1
RNF4-218ENST00000513284 CRKLP46109 303 aaKnown RBP15.65■□□□□ 0.1
RNF4-218ENST00000513284 INTS5Q6P9B9 1019 aaKnown RBP15.65■□□□□ 0.1
RNF4-218ENST00000513284 POLKQ9UBT6 870 aa15.65■□□□□ 0.1
RNF4-218ENST00000513284 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
RNF4-218ENST00000513284 SLC24A1O60721 1099 aa15.64■□□□□ 0.09
RNF4-218ENST00000513284 PTCD1O75127 700 aaKnown RBP15.64■□□□□ 0.09
RNF4-218ENST00000513284 FOXN1O15353 648 aa15.63■□□□□ 0.09
RNF4-218ENST00000513284 EIF4A2Q14240 407 aaKnown RBP15.63■□□□□ 0.09
RNF4-218ENST00000513284 KIF20BQ96Q89 1820 aa15.63■□□□□ 0.09
RNF4-218ENST00000513284 NFKBIEO00221 500 aa15.62■□□□□ 0.09
RNF4-218ENST00000513284 ADAMTS7Q9UKP4 1686 aa15.62■□□□□ 0.09
RNF4-218ENST00000513284 CABP4P57796 275 aa15.61■□□□□ 0.09
RNF4-218ENST00000513284 MKRN1Q9UHC7 482 aaKnown RBP15.61■□□□□ 0.09
RNF4-218ENST00000513284 ANKRD26Q9UPS8 1709 aa15.6■□□□□ 0.09
RNF4-218ENST00000513284 USPL1Q5W0Q7 1092 aa15.6■□□□□ 0.09
RNF4-218ENST00000513284 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
RNF4-218ENST00000513284 CCDC88AQ3V6T2 1871 aa15.59■□□□□ 0.09
RNF4-218ENST00000513284 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
RNF4-218ENST00000513284 POTEJP0CG39 1038 aa15.59■□□□□ 0.09
RNF4-218ENST00000513284 NFIXQ14938 502 aa15.59■□□□□ 0.09
RNF4-218ENST00000513284 CREBZFQ9NS37 354 aa15.59■□□□□ 0.09
RNF4-218ENST00000513284 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
RNF4-218ENST00000513284 TTLL6Q8N841 843 aa15.58■□□□□ 0.08
RNF4-218ENST00000513284 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms