RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 COL5A3P25940 1745 aaPredicted RBP26.32■■□□□ 1.8
CCHCR1-230ENST00000513222 AKAP4Q5JQC9 854 aa26.31■■□□□ 1.8
CCHCR1-230ENST00000513222 C1orf141Q5JVX7 400 aa26.31■■□□□ 1.8
CCHCR1-230ENST00000513222 FHDC1Q9C0D6 1143 aaPredicted RBP26.31■■□□□ 1.8
CCHCR1-230ENST00000513222 ITPK1Q13572 414 aa26.29■■□□□ 1.8
CCHCR1-230ENST00000513222 MRC1P22897 1456 aa26.29■■□□□ 1.8
CCHCR1-230ENST00000513222 LINC00116Q8NCU8 138 aa26.28■■□□□ 1.8
CCHCR1-230ENST00000513222 SLC4A9Q96Q91 983 aa26.28■■□□□ 1.8
CCHCR1-230ENST00000513222 CABP4P57796 275 aa26.27■■□□□ 1.8
CCHCR1-230ENST00000513222 MYH14Q7Z406 1995 aaKnown RBP26.26■■□□□ 1.79
CCHCR1-230ENST00000513222 SSFA2P28290 1259 aa26.26■■□□□ 1.79
CCHCR1-230ENST00000513222 AMIGO3Q86WK7 504 aa26.26■■□□□ 1.79
CCHCR1-230ENST00000513222 HMOX1P09601 288 aa26.25■■□□□ 1.79
CCHCR1-230ENST00000513222 POLD1P28340 1107 aa26.25■■□□□ 1.79
CCHCR1-230ENST00000513222 ATP6V1AP38606 617 aa26.25■■□□□ 1.79
CCHCR1-230ENST00000513222 RC3H1Q5TC82 1133 aaKnown RBP26.25■■□□□ 1.79
CCHCR1-230ENST00000513222 NFATC2IPQ8NCF5 419 aa26.25■■□□□ 1.79
CCHCR1-230ENST00000513222 AK7Q96M32 723 aa26.24■■□□□ 1.79
CCHCR1-230ENST00000513222 MTHFSDQ2M296 383 aaKnown RBP26.22■■□□□ 1.79
CCHCR1-230ENST00000513222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.21■■□□□ 1.79
CCHCR1-230ENST00000513222 PPP2R1AP30153 589 aa26.21■■□□□ 1.79
CCHCR1-230ENST00000513222 CNTNAP4Q9C0A0 1308 aa26.2■■□□□ 1.79
CCHCR1-230ENST00000513222 SLC52A2Q9HAB3 445 aa26.2■■□□□ 1.78
CCHCR1-230ENST00000513222 LGR6Q9HBX8 967 aa26.2■■□□□ 1.78
CCHCR1-230ENST00000513222 TJP1Q07157 1748 aa26.19■■□□□ 1.78
CCHCR1-230ENST00000513222 DCAF8L1A6NGE4 600 aa26.19■■□□□ 1.78
CCHCR1-230ENST00000513222 RNMTO43148 476 aaKnown RBP26.19■■□□□ 1.78
CCHCR1-230ENST00000513222 CHD4Q14839 1912 aa26.18■■□□□ 1.78
CCHCR1-230ENST00000513222 CFAP53Q96M91 514 aa26.18■■□□□ 1.78
CCHCR1-230ENST00000513222 SIPA1L3O60292 1781 aaPredicted RBP26.18■■□□□ 1.78
CCHCR1-230ENST00000513222 UTRNP46939 3433 aa26.17■■□□□ 1.78
CCHCR1-230ENST00000513222 UBR2Q8IWV8 1755 aa26.17■■□□□ 1.78
CCHCR1-230ENST00000513222 MSH5O43196 834 aa26.16■■□□□ 1.78
CCHCR1-230ENST00000513222 ADRA2BP18089 450 aa26.16■■□□□ 1.78
CCHCR1-230ENST00000513222 GNPATO15228 680 aa26.15■■□□□ 1.78
CCHCR1-230ENST00000513222 RBM42Q9BTD8 480 aaKnown RBP26.15■■□□□ 1.78
CCHCR1-230ENST00000513222 U2SURPO15042 1029 aaKnown RBP26.14■■□□□ 1.78
CCHCR1-230ENST00000513222 RSPH6AQ9H0K4 717 aa26.14■■□□□ 1.78
CCHCR1-230ENST00000513222 RPS6KA4O75676 772 aa26.13■■□□□ 1.77
CCHCR1-230ENST00000513222 GAS2L2Q8NHY3 880 aa26.13■■□□□ 1.77
CCHCR1-230ENST00000513222 KCPQ6ZWJ8 1503 aa26.13■■□□□ 1.77
CCHCR1-230ENST00000513222 C4AP0C0L4 1744 aa26.12■■□□□ 1.77
CCHCR1-230ENST00000513222 SMIM5Q71RC9 77 aa26.12■■□□□ 1.77
CCHCR1-230ENST00000513222 NUDCQ9Y266 331 aa26.12■■□□□ 1.77
CCHCR1-230ENST00000513222 RTCBQ9Y3I0 505 aaKnown RBP26.12■■□□□ 1.77
CCHCR1-230ENST00000513222 CD2APQ9Y5K6 639 aa26.12■■□□□ 1.77
CCHCR1-230ENST00000513222 CNGB1Q14028 1251 aaPredicted RBP26.11■■□□□ 1.77
CCHCR1-230ENST00000513222 MSL1Q68DK7 614 aa26.11■■□□□ 1.77
CCHCR1-230ENST00000513222 CEMIPQ8WUJ3 1361 aa26.1■■□□□ 1.77
CCHCR1-230ENST00000513222 KIF13BQ9NQT8 1826 aa26.1■■□□□ 1.77
CCHCR1-230ENST00000513222 PTCD1O75127 700 aaKnown RBP26.1■■□□□ 1.77
CCHCR1-230ENST00000513222 FCHSD2O94868 740 aa26.1■■□□□ 1.77
CCHCR1-230ENST00000513222 PHF14O94880 888 aa26.1■■□□□ 1.77
CCHCR1-230ENST00000513222 TRAPPC3LQ5T215 181 aa26.1■■□□□ 1.77
CCHCR1-230ENST00000513222 IL17REQ8NFR9 667 aa26.1■■□□□ 1.77
CCHCR1-230ENST00000513222 GNAT3A8MTJ3 354 aa26.09■■□□□ 1.77
CCHCR1-230ENST00000513222 VSIG10Q8N0Z9 540 aa26.09■■□□□ 1.77
CCHCR1-230ENST00000513222 PHACTR3Q96KR7 559 aa26.09■■□□□ 1.77
CCHCR1-230ENST00000513222 GOLGB1Q14789 3259 aaKnown RBP26.08■■□□□ 1.77
CCHCR1-230ENST00000513222 ARHGEF1Q92888 912 aaKnown RBP26.08■■□□□ 1.77
CCHCR1-230ENST00000513222 CRKLP46109 303 aaKnown RBP26.07■■□□□ 1.76
CCHCR1-230ENST00000513222 NLGN2Q8NFZ4 835 aa26.07■■□□□ 1.76
CCHCR1-230ENST00000513222 PRKAR2BP31323 418 aa26.06■■□□□ 1.76
CCHCR1-230ENST00000513222 INTS5Q6P9B9 1019 aaKnown RBP26.06■■□□□ 1.76
CCHCR1-230ENST00000513222 YY1P25490 414 aa26.05■■□□□ 1.76
CCHCR1-230ENST00000513222 NLGN1Q8N2Q7 840 aa26.05■■□□□ 1.76
CCHCR1-230ENST00000513222 U2AF1L5P0DN76 240 aaPredicted RBP26.03■■□□□ 1.76
CCHCR1-230ENST00000513222 CYP19A1P11511 503 aaPredicted RBP26.03■■□□□ 1.76
CCHCR1-230ENST00000513222 U2AF1Q01081 240 aaKnown RBP eCLIP26.03■■□□□ 1.76
CCHCR1-230ENST00000513222 SLC39A6Q13433 755 aa26.03■■□□□ 1.76
CCHCR1-230ENST00000513222 GYS1P13807 737 aa26.02■■□□□ 1.76
CCHCR1-230ENST00000513222 DNAJC10Q8IXB1 793 aa26.01■■□□□ 1.75
CCHCR1-230ENST00000513222 HTATSF1O43719 755 aaKnown RBP26■■□□□ 1.75
CCHCR1-230ENST00000513222 KIAA1551Q9HCM1 1747 aa26■■□□□ 1.75
CCHCR1-230ENST00000513222 DLG5Q8TDM6 1919 aa25.99■■□□□ 1.75
CCHCR1-230ENST00000513222 RFC4P35249 363 aa25.99■■□□□ 1.75
CCHCR1-230ENST00000513222 ZNF790Q6PG37 636 aa25.99■■□□□ 1.75
CCHCR1-230ENST00000513222 CCDC87Q9NVE4 849 aa25.99■■□□□ 1.75
CCHCR1-230ENST00000513222 SOS1Q07889 1333 aaPredicted RBP25.98■■□□□ 1.75
CCHCR1-230ENST00000513222 MMP10P09238 476 aa25.98■■□□□ 1.75
CCHCR1-230ENST00000513222 TEFQ10587 303 aa25.98■■□□□ 1.75
CCHCR1-230ENST00000513222 RALBP1Q15311 655 aa25.98■■□□□ 1.75
CCHCR1-230ENST00000513222 GPR162Q16538 588 aa25.98■■□□□ 1.75
CCHCR1-230ENST00000513222 KLHL34Q8N239 644 aa25.98■■□□□ 1.75
CCHCR1-230ENST00000513222 USP42Q9H9J4 1324 aaKnown RBP25.97■■□□□ 1.75
CCHCR1-230ENST00000513222 YBX3P16989 372 aaKnown RBP eCLIP25.95■■□□□ 1.74
CCHCR1-230ENST00000513222 ZNF496Q96IT1 587 aaPredicted RBP25.95■■□□□ 1.74
CCHCR1-230ENST00000513222 PLEKHF1Q96S99 279 aa25.95■■□□□ 1.74
CCHCR1-230ENST00000513222 TEX13AQ9BXU3 409 aaPredicted RBP25.95■■□□□ 1.74
CCHCR1-230ENST00000513222 HEG1Q9ULI3 1381 aa25.95■■□□□ 1.74
CCHCR1-230ENST00000513222 GRIN3BO60391 1043 aa25.94■■□□□ 1.74
CCHCR1-230ENST00000513222 TTC5Q8N0Z6 440 aa25.93■■□□□ 1.74
CCHCR1-230ENST00000513222 C10orf71Q711Q0 1435 aa25.93■■□□□ 1.74
CCHCR1-230ENST00000513222 BRCA1P38398 1863 aaKnown RBP25.93■■□□□ 1.74
CCHCR1-230ENST00000513222 STARD3NLO95772 234 aa25.91■■□□□ 1.74
CCHCR1-230ENST00000513222 TM4SF1P30408 202 aa25.91■■□□□ 1.74
CCHCR1-230ENST00000513222 TGFB2P61812 414 aa25.91■■□□□ 1.74
CCHCR1-230ENST00000513222 DDX10Q13206 875 aaKnown RBP25.9■■□□□ 1.74
CCHCR1-230ENST00000513222 SRP68Q9UHB9 627 aaKnown RBP25.9■■□□□ 1.74
CCHCR1-230ENST00000513222 NARFQ9UHQ1 456 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms