RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 USP17L19D6RCP7 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L20D6RJB6 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 USP17L24Q0WX57 530 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 TMEM214Q6NUQ4 689 aaKnown RBP10.38□□□□□ -0.75
CHD1-209ENST00000512844 XAGE2Q96GT9 111 aa10.38□□□□□ -0.75
CHD1-209ENST00000512844 ZSCAN10Q96SZ4 725 aaPredicted RBP10.38□□□□□ -0.75
CHD1-209ENST00000512844 WASLO00401 505 aaPredicted RBP10.37□□□□□ -0.75
CHD1-209ENST00000512844 PPP1R15AO75807 674 aaPredicted RBP10.37□□□□□ -0.75
CHD1-209ENST00000512844 IL2RAP01589 272 aa10.37□□□□□ -0.75
CHD1-209ENST00000512844 RNF144AP50876 292 aaPredicted RBP10.37□□□□□ -0.75
CHD1-209ENST00000512844 GNASQ5JWF2 1037 aa10.37□□□□□ -0.75
CHD1-209ENST00000512844 LYSMD3Q7Z3D4 306 aa10.37□□□□□ -0.75
CHD1-209ENST00000512844 SIX5Q8N196 739 aa10.37□□□□□ -0.75
CHD1-209ENST00000512844 SCNN1DP51172 638 aa10.36□□□□□ -0.75
CHD1-209ENST00000512844 SEC13P55735 322 aa10.36□□□□□ -0.75
CHD1-209ENST00000512844 CENPCQ03188 943 aa10.36□□□□□ -0.75
CHD1-209ENST00000512844 CRTC2Q53ET0 693 aaPredicted RBP10.36□□□□□ -0.75
CHD1-209ENST00000512844 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHD1-209ENST00000512844 ZNF358Q9NW07 568 aa10.36□□□□□ -0.75
CHD1-209ENST00000512844 STAU1O95793 577 aaKnown RBP10.35□□□□□ -0.75
CHD1-209ENST00000512844 PTK7Q13308 1070 aa10.35□□□□□ -0.75
CHD1-209ENST00000512844 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
CHD1-209ENST00000512844 ANKMY2Q8IV38 441 aa10.35□□□□□ -0.75
CHD1-209ENST00000512844 NBPF15Q8N660 670 aa10.35□□□□□ -0.75
CHD1-209ENST00000512844 RNF217Q8TC41 542 aa10.35□□□□□ -0.75
CHD1-209ENST00000512844 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
CHD1-209ENST00000512844 KIAA1024Q9UPX6 916 aa10.35□□□□□ -0.75
CHD1-209ENST00000512844 TMEM229AB2RXF0 380 aa10.34□□□□□ -0.75
CHD1-209ENST00000512844 SNRPBP14678 240 aaKnown RBP10.34□□□□□ -0.75
CHD1-209ENST00000512844 SMTNP53814 917 aa10.34□□□□□ -0.75
CHD1-209ENST00000512844 DPYDQ12882 1025 aa10.34□□□□□ -0.75
CHD1-209ENST00000512844 FOXD4L5Q5VV16 416 aaPredicted RBP10.34□□□□□ -0.75
CHD1-209ENST00000512844 DNMT3LQ9UJW3 386 aa10.34□□□□□ -0.75
CHD1-209ENST00000512844 NOVA2Q9UNW9 492 aaKnown RBP10.34□□□□□ -0.75
CHD1-209ENST00000512844 ZBTB7BO15156 539 aaPredicted RBP10.33□□□□□ -0.76
CHD1-209ENST00000512844 HINFPQ9BQA5 517 aa10.33□□□□□ -0.76
CHD1-209ENST00000512844 CHMP3Q9Y3E7 222 aa10.33□□□□□ -0.76
CHD1-209ENST00000512844 A6NJY4 79 aa10.32□□□□□ -0.76
CHD1-209ENST00000512844 SFI1A8K8P3 1242 aa10.32□□□□□ -0.76
CHD1-209ENST00000512844 SOBPA7XYQ1 873 aa10.31□□□□□ -0.76
CHD1-209ENST00000512844 M0R2N6 131 aa10.31□□□□□ -0.76
CHD1-209ENST00000512844 ATG7O95352 703 aa10.31□□□□□ -0.76
CHD1-209ENST00000512844 TAS1R3Q7RTX0 852 aa10.31□□□□□ -0.76
CHD1-209ENST00000512844 SLC4A9Q96Q91 983 aa10.31□□□□□ -0.76
CHD1-209ENST00000512844 POTECB2RU33 542 aa10.3□□□□□ -0.76
CHD1-209ENST00000512844 CSB-PGBD3P0DP91 1061 aa10.3□□□□□ -0.76
CHD1-209ENST00000512844 RHBDD1Q8TEB9 315 aa10.3□□□□□ -0.76
CHD1-209ENST00000512844 GRIP2Q9C0E4 1043 aa10.3□□□□□ -0.76
CHD1-209ENST00000512844 POU4F2Q12837 409 aa10.29□□□□□ -0.76
CHD1-209ENST00000512844 ELOAQ14241 798 aaKnown RBP10.29□□□□□ -0.76
CHD1-209ENST00000512844 NIFKQ9BYG3 293 aaKnown RBP10.29□□□□□ -0.76
CHD1-209ENST00000512844 HRH3Q9Y5N1 445 aa10.29□□□□□ -0.76
CHD1-209ENST00000512844 CDK2AP1O14519 115 aa10.28□□□□□ -0.76
CHD1-209ENST00000512844 RHOQP17081 205 aa10.28□□□□□ -0.76
CHD1-209ENST00000512844 PPARGC1BQ86YN6 1023 aaKnown RBP10.28□□□□□ -0.76
CHD1-209ENST00000512844 TNS4Q8IZW8 715 aa10.28□□□□□ -0.76
CHD1-209ENST00000512844 TSEN2Q8NCE0 465 aaKnown RBP10.28□□□□□ -0.76
CHD1-209ENST00000512844 FHDC1Q9C0D6 1143 aaPredicted RBP10.28□□□□□ -0.76
CHD1-209ENST00000512844 CABP1Q9NZU7 370 aa10.28□□□□□ -0.76
CHD1-209ENST00000512844 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
CHD1-209ENST00000512844 NBPF10Q6P3W6 841 aaKnown RBP10.27□□□□□ -0.77
CHD1-209ENST00000512844 TIMMDC1Q9NPL8 285 aa10.27□□□□□ -0.77
CHD1-209ENST00000512844 PHKA2P46019 1235 aa10.26□□□□□ -0.77
CHD1-209ENST00000512844 PTSQ03393 145 aa10.26□□□□□ -0.77
CHD1-209ENST00000512844 MTFR1Q15390 333 aa10.26□□□□□ -0.77
CHD1-209ENST00000512844 WDR44Q5JSH3 913 aa10.26□□□□□ -0.77
CHD1-209ENST00000512844 SCHIP1Q9P0W5 487 aaPredicted RBP10.26□□□□□ -0.77
CHD1-209ENST00000512844 PLA2G4AP47712 749 aa10.25□□□□□ -0.77
CHD1-209ENST00000512844 SRPK2P78362 688 aaKnown RBP10.25□□□□□ -0.77
CHD1-209ENST00000512844 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
CHD1-209ENST00000512844 SLC9A9Q8IVB4 645 aa10.25□□□□□ -0.77
CHD1-209ENST00000512844 ZNF232Q9UNY5 417 aa10.25□□□□□ -0.77
CHD1-209ENST00000512844 SWI5Q1ZZU3 235 aa10.24□□□□□ -0.77
CHD1-209ENST00000512844 AIDAQ96BJ3 306 aa10.24□□□□□ -0.77
CHD1-209ENST00000512844 ARXQ96QS3 562 aa10.24□□□□□ -0.77
CHD1-209ENST00000512844 PPP1R12BO60237 982 aaPredicted RBP10.23□□□□□ -0.77
CHD1-209ENST00000512844 PSMA6P60900 246 aaKnown RBP10.23□□□□□ -0.77
CHD1-209ENST00000512844 PDE4CQ08493 712 aa10.23□□□□□ -0.77
CHD1-209ENST00000512844 C4orf17Q53FE4 359 aa10.23□□□□□ -0.77
CHD1-209ENST00000512844 STK32AQ8WU08 396 aa10.23□□□□□ -0.77
CHD1-209ENST00000512844 VTI1AQ96AJ9 217 aa10.23□□□□□ -0.77
CHD1-209ENST00000512844 GAS2L1Q99501 681 aaPredicted RBP10.23□□□□□ -0.77
CHD1-209ENST00000512844 A0A1B0GTH6 734 aa10.22□□□□□ -0.77
CHD1-209ENST00000512844 DKK1O94907 266 aa10.22□□□□□ -0.77
CHD1-209ENST00000512844 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
CHD1-209ENST00000512844 RIPOR1Q6ZS17 1223 aa10.22□□□□□ -0.77
CHD1-209ENST00000512844 GAS2L2Q8NHY3 880 aa10.22□□□□□ -0.77
CHD1-209ENST00000512844 SLC16A10Q8TF71 515 aa10.22□□□□□ -0.77
CHD1-209ENST00000512844 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
CHD1-209ENST00000512844 SCG3Q8WXD2 468 aaKnown RBP10.22□□□□□ -0.77
CHD1-209ENST00000512844 TSPAN10Q9H1Z9 355 aaPredicted RBP10.22□□□□□ -0.77
CHD1-209ENST00000512844 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
CHD1-209ENST00000512844 DYRK1BQ9Y463 629 aa10.22□□□□□ -0.77
CHD1-209ENST00000512844 SERTM1A2A2V5 107 aa10.21□□□□□ -0.77
CHD1-209ENST00000512844 TBCELQ5QJ74 424 aa10.21□□□□□ -0.77
CHD1-209ENST00000512844 TMEM164Q5U3C3 297 aa10.21□□□□□ -0.77
CHD1-209ENST00000512844 PGBD3Q8N328 593 aa10.21□□□□□ -0.77
CHD1-209ENST00000512844 CCDC155Q8N6L0 562 aa10.21□□□□□ -0.77
CHD1-209ENST00000512844 NXF1Q9UBU9 619 aaKnown RBP10.21□□□□□ -0.77
CHD1-209ENST00000512844 EPHA4P54764 986 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms