RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 IFRD1O00458 451 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 MAP3K7O43318 606 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 C12orf49Q9H741 205 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 PPCSQ9HAB8 311 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 AS3MTQ9HBK9 375 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 PTPRHQ9HD43 1115 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 ENAMQ9NRM1 1142 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 SCP2P22307 547 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 ZNF76P36508 570 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 RASSF7Q02833 373 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 SEMA3FQ13275 785 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 EFCAB2Q5VUJ9 269 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 PCGF5Q86SE9 256 aa7.97□□□□□ -1.13
TRAPPC11-209ENST00000512476 LZTS3O60299 673 aaPredicted RBP7.96□□□□□ -1.13
TRAPPC11-209ENST00000512476 FOSP01100 380 aaPredicted RBP7.96□□□□□ -1.13
TRAPPC11-209ENST00000512476 POU5F1Q01860 360 aaKnown RBP7.96□□□□□ -1.13
TRAPPC11-209ENST00000512476 TSPAN18Q96SJ8 248 aa7.96□□□□□ -1.13
TRAPPC11-209ENST00000512476 DUSP9Q99956 384 aaKnown RBP7.96□□□□□ -1.13
TRAPPC11-209ENST00000512476 CCDC88BA6NC98 1476 aa7.96□□□□□ -1.13
TRAPPC11-209ENST00000512476 SPTLC1O15269 473 aa7.96□□□□□ -1.14
TRAPPC11-209ENST00000512476 BPNT1O95861 308 aa7.96□□□□□ -1.14
TRAPPC11-209ENST00000512476 C1QTNF12Q5T7M4 302 aa7.96□□□□□ -1.14
TRAPPC11-209ENST00000512476 IFNL1Q8IU54 200 aa7.96□□□□□ -1.14
TRAPPC11-209ENST00000512476 UPF1Q92900 1129 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRAPPC11-209ENST00000512476 APBA2Q99767 749 aa7.96□□□□□ -1.14
TRAPPC11-209ENST00000512476 DIS3Q9Y2L1 958 aaKnown RBP7.96□□□□□ -1.14
TRAPPC11-209ENST00000512476 NCAPD3P42695 1498 aa7.96□□□□□ -1.14
TRAPPC11-209ENST00000512476 SERINC3Q13530 473 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 ARNT2Q9HBZ2 717 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 CASS4Q9NQ75 786 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 FANCLQ9NW38 375 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 HMGXB3Q12766 1538 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 DDX46Q7L014 1031 aaKnown RBP7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 TMC7Q7Z402 723 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 RGL4Q8IZJ4 473 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 PRPF38AQ8NAV1 312 aaKnown RBP7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 FAM174AQ8TBP5 190 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 AKT1S1Q96B36 256 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 MRFAP1L1Q96HT8 127 aa7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 DNMT3AQ9Y6K1 912 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC11-209ENST00000512476 FAM221BA6H8Z2 402 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 HCLS1P14317 486 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 KCTD2Q14681 263 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 PUS10Q3MIT2 529 aaKnown RBP7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 PLEKHG4Q58EX7 1191 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 TTC36A6NLP5 189 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 FAM196BA6NMK8 535 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 PRSS47A8MTI9 375 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 CC2D1AQ6P1N0 951 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 C14orf80Q86SX3 495 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 MPNDQ8N594 471 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 ZNF622Q969S3 477 aaKnown RBP eCLIP7.94□□□□□ -1.147e-6■■□□□ 12.8
TRAPPC11-209ENST00000512476 PRIMPOLQ96LW4 560 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 NAP1L4Q99733 375 aaKnown RBP7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 ZHX3Q9H4I2 956 aa7.94□□□□□ -1.14
TRAPPC11-209ENST00000512476 CCDC85CA6NKD9 419 aa7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 CT47B1P0C2W7 299 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 SKAP1Q86WV1 359 aa7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 GAS2L2Q8NHY3 880 aa7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 RSPH9Q9H1X1 276 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 LZTS1Q9Y250 596 aa7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 SRGNP10124 158 aa7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 GTF2E1P29083 439 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 GNL2Q13823 731 aaKnown RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 DALRD3Q5D0E6 543 aaKnown RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 NUTM2DQ5VT03 806 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC11-209ENST00000512476 CC2D2AQ9P2K1 1620 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 USP17L5A8MUK1 530 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 KCNH2Q12809 1159 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 NBPF11Q86T75 865 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 SVIPQ8NHG7 77 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 CALRP27797 417 aaKnown RBP7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 MAP3K9P80192 1104 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 POU5F1BQ06416 359 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 OCLNQ16625 522 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 ZSCAN29Q8IWY8 852 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 SUGP1Q8IWZ8 645 aaKnown RBP7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 FAM200AQ8TCP9 573 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 GTF3C2Q8WUA4 911 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 ZNF594Q96JF6 807 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 CDC5LQ99459 802 aaKnown RBP7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 VTI1BQ9UEU0 232 aa7.92□□□□□ -1.14
TRAPPC11-209ENST00000512476 C21orf2O43822 256 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 TGFB3P10600 412 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 RASA1P20936 1047 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 BRDTQ58F21 947 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 SRPK1Q96SB4 655 aaKnown RBP7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 MKNK1Q9BUB5 465 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 DDX41Q9UJV9 622 aaKnown RBP7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 CLGNO14967 610 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 TIMM44O43615 452 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 SORBS3O60504 671 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 RGS20O76081 388 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 TKFCQ3LXA3 575 aa7.91□□□□□ -1.14
TRAPPC11-209ENST00000512476 MRS2Q9HD23 443 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms