RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
SNCAIP-217ENST00000512385 ZSCAN30Q86W11 494 aa17.14■□□□□ 0.33
SNCAIP-217ENST00000512385 PKP1Q13835 747 aa17.14■□□□□ 0.33
SNCAIP-217ENST00000512385 SNX21Q969T3 373 aa17.14■□□□□ 0.33
SNCAIP-217ENST00000512385 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
SNCAIP-217ENST00000512385 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
SNCAIP-217ENST00000512385 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
SNCAIP-217ENST00000512385 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
SNCAIP-217ENST00000512385 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
SNCAIP-217ENST00000512385 DDX19BQ9UMR2 479 aa17.12■□□□□ 0.33
SNCAIP-217ENST00000512385 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
SNCAIP-217ENST00000512385 MSNP26038 577 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-217ENST00000512385 CAVIN1Q6NZI2 390 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-217ENST00000512385 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-217ENST00000512385 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-217ENST00000512385 CSB-PGBD3P0DP91 1061 aa17.11■□□□□ 0.33
SNCAIP-217ENST00000512385 NUCB1Q02818 461 aa17.11■□□□□ 0.33
SNCAIP-217ENST00000512385 CCDC173Q0VFZ6 552 aa17.11■□□□□ 0.33
SNCAIP-217ENST00000512385 MCTP1Q6DN14 999 aa17.11■□□□□ 0.33
SNCAIP-217ENST00000512385 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
SNCAIP-217ENST00000512385 OFD1O75665 1012 aa17.11■□□□□ 0.33
SNCAIP-217ENST00000512385 PPP1R9BQ96SB3 815 aa17.11■□□□□ 0.33
SNCAIP-217ENST00000512385 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
SNCAIP-217ENST00000512385 DLG5Q8TDM6 1919 aa17.1■□□□□ 0.33
SNCAIP-217ENST00000512385 K7ELQ4 463 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-217ENST00000512385 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-217ENST00000512385 TBC1D9Q6ZT07 1266 aa17.1■□□□□ 0.33
SNCAIP-217ENST00000512385 C8orf58Q8NAV2 365 aa17.1■□□□□ 0.33
SNCAIP-217ENST00000512385 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-217ENST00000512385 KIF1AQ12756 1690 aa17.1■□□□□ 0.33
SNCAIP-217ENST00000512385 KDRP35968 1356 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 PRDM11Q9NQV5 511 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 ERBB3P21860 1342 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 ALS2Q96Q42 1657 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 RBSNQ9H1K0 784 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
SNCAIP-217ENST00000512385 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.08■□□□□ 0.33
SNCAIP-217ENST00000512385 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-217ENST00000512385 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-217ENST00000512385 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-217ENST00000512385 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
SNCAIP-217ENST00000512385 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
SNCAIP-217ENST00000512385 SLIT3O75094 1523 aa17.07■□□□□ 0.32
SNCAIP-217ENST00000512385 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-217ENST00000512385 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-217ENST00000512385 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-217ENST00000512385 MPNDQ8N594 471 aa17.06■□□□□ 0.32
SNCAIP-217ENST00000512385 ANP32BQ92688 251 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-217ENST00000512385 KLHL40Q2TBA0 621 aa17.06■□□□□ 0.32
SNCAIP-217ENST00000512385 RTF1Q92541 710 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-217ENST00000512385 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
SNCAIP-217ENST00000512385 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
SNCAIP-217ENST00000512385 PRDM4Q9UKN5 801 aa17.06■□□□□ 0.32
SNCAIP-217ENST00000512385 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
SNCAIP-217ENST00000512385 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
SNCAIP-217ENST00000512385 LTBP4Q8N2S1 1624 aa17.04■□□□□ 0.32
SNCAIP-217ENST00000512385 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
SNCAIP-217ENST00000512385 UQCRHLA0A096LP55 91 aa17.04■□□□□ 0.32
SNCAIP-217ENST00000512385 ADAMTS2O95450 1211 aa17.04■□□□□ 0.32
SNCAIP-217ENST00000512385 UQCRHP07919 91 aa17.04■□□□□ 0.32
SNCAIP-217ENST00000512385 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
SNCAIP-217ENST00000512385 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 GNAI1P63096 354 aa17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 NSFL1CQ9UNZ2 370 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-217ENST00000512385 USP54Q70EL1 1684 aa17.02■□□□□ 0.32
SNCAIP-217ENST00000512385 ZGPATQ8N5A5 531 aaKnown RBP17.02■□□□□ 0.32
SNCAIP-217ENST00000512385 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
SNCAIP-217ENST00000512385 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
SNCAIP-217ENST00000512385 VAMP4O75379 141 aa17.02■□□□□ 0.31
SNCAIP-217ENST00000512385 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.31
SNCAIP-217ENST00000512385 RNF214Q8ND24 703 aa17.02■□□□□ 0.31
SNCAIP-217ENST00000512385 UBAP1LF5GYI3 381 aa17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 KCNQ3O43525 872 aa17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 LARP1Q6PKG0 1096 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 SIRT2Q8IXJ6 389 aa17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 TSC1Q92574 1164 aa17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
SNCAIP-217ENST00000512385 IL16Q14005 1332 aa17■□□□□ 0.31
SNCAIP-217ENST00000512385 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
SNCAIP-217ENST00000512385 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
SNCAIP-217ENST00000512385 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
SNCAIP-217ENST00000512385 GPT2Q8TD30 523 aa17■□□□□ 0.31
SNCAIP-217ENST00000512385 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
SNCAIP-217ENST00000512385 CHL1O00533 1208 aa16.99■□□□□ 0.31
SNCAIP-217ENST00000512385 GSPT1P15170 499 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-217ENST00000512385 NOL7Q9UMY1 257 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms