RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 TAS1R3Q7RTX0 852 aa8.67□□□□□ -1.02
MATR3-217ENST00000511333 NDFIP2Q9NV92 336 aa8.67□□□□□ -1.02
MATR3-217ENST00000511333 SPATA31C1P0DKV0 1188 aa8.66□□□□□ -1.02
MATR3-217ENST00000511333 ARAFP10398 606 aa8.66□□□□□ -1.02
MATR3-217ENST00000511333 RNF135Q8IUD6 432 aa8.66□□□□□ -1.02
MATR3-217ENST00000511333 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
MATR3-217ENST00000511333 BMP4P12644 408 aa8.65□□□□□ -1.02
MATR3-217ENST00000511333 LRP8Q14114 963 aa8.65□□□□□ -1.02
MATR3-217ENST00000511333 DZIP3Q86Y13 1208 aaKnown RBP8.64□□□□□ -1.03
MATR3-217ENST00000511333 LRRN4Q8WUT4 740 aa8.64□□□□□ -1.03
MATR3-217ENST00000511333 ZMYND10O75800 440 aa8.63□□□□□ -1.03
MATR3-217ENST00000511333 ERVK-9P63128 1117 aa8.63□□□□□ -1.03
MATR3-217ENST00000511333 NR6A1Q15406 480 aa8.63□□□□□ -1.03
MATR3-217ENST00000511333 TRIM11Q96F44 468 aa8.63□□□□□ -1.03
MATR3-217ENST00000511333 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
MATR3-217ENST00000511333 A0A1B0GTH6 734 aa8.62□□□□□ -1.03
MATR3-217ENST00000511333 CLK2P49760 499 aaKnown RBP8.62□□□□□ -1.03
MATR3-217ENST00000511333 PRSS36Q5K4E3 855 aa8.62□□□□□ -1.03
MATR3-217ENST00000511333 CHSY3Q70JA7 882 aa8.62□□□□□ -1.03
MATR3-217ENST00000511333 FGFR3P22607 806 aa8.61□□□□□ -1.03
MATR3-217ENST00000511333 CCDC125Q86Z20 511 aa8.61□□□□□ -1.03
MATR3-217ENST00000511333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
MATR3-217ENST00000511333 CTBSQ01459 385 aa8.59□□□□□ -1.03
MATR3-217ENST00000511333 GPAMQ9HCL2 828 aa8.59□□□□□ -1.03
MATR3-217ENST00000511333 CC2D2BQ6DHV5 1058 aa8.58□□□□□ -1.04
MATR3-217ENST00000511333 CYP2U1Q7Z449 544 aa8.58□□□□□ -1.04
MATR3-217ENST00000511333 ABHD17AQ96GS6 310 aa8.58□□□□□ -1.04
MATR3-217ENST00000511333 ARID1BQ8NFD5 2236 aaPredicted RBP8.57□□□□□ -1.04
MATR3-217ENST00000511333 BNIP3LO60238 219 aa8.57□□□□□ -1.04
MATR3-217ENST00000511333 NEURL1BA8MQ27 555 aa8.56□□□□□ -1.04
MATR3-217ENST00000511333 TRAK2O60296 914 aa8.56□□□□□ -1.04
MATR3-217ENST00000511333 PLVAPQ9BX97 442 aa8.56□□□□□ -1.04
MATR3-217ENST00000511333 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
MATR3-217ENST00000511333 TRIM66O15016 1216 aa8.55□□□□□ -1.04
MATR3-217ENST00000511333 HYAL3O43820 417 aaPredicted RBP8.55□□□□□ -1.04
MATR3-217ENST00000511333 MCTP1Q6DN14 999 aa8.55□□□□□ -1.04
MATR3-217ENST00000511333 EFHC2Q5JST6 749 aa8.54□□□□□ -1.04
MATR3-217ENST00000511333 CRISPLD1Q9H336 500 aa8.54□□□□□ -1.04
MATR3-217ENST00000511333 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
MATR3-217ENST00000511333 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
MATR3-217ENST00000511333 H2AFB2P0C5Z0 115 aa8.53□□□□□ -1.04
MATR3-217ENST00000511333 ADH6P28332 368 aa8.53□□□□□ -1.04
MATR3-217ENST00000511333 FCHSD1Q86WN1 690 aa8.53□□□□□ -1.04
MATR3-217ENST00000511333 PNMA1Q8ND90 353 aa8.53□□□□□ -1.04
MATR3-217ENST00000511333 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
MATR3-217ENST00000511333 KLF15Q9UIH9 416 aa8.53□□□□□ -1.04
MATR3-217ENST00000511333 CSB-PGBD3P0DP91 1061 aa8.52□□□□□ -1.05
MATR3-217ENST00000511333 PGBD3Q8N328 593 aa8.52□□□□□ -1.05
MATR3-217ENST00000511333 KRTAP4-9Q9BYQ8 210 aa8.52□□□□□ -1.05
MATR3-217ENST00000511333 RUBCNLQ9H714 662 aa8.52□□□□□ -1.05
MATR3-217ENST00000511333 GIGYF1O75420 1035 aaPredicted RBP8.51□□□□□ -1.05
MATR3-217ENST00000511333 FAM182BQ5T319 152 aa8.51□□□□□ -1.05
MATR3-217ENST00000511333 ESYT1Q9BSJ8 1104 aa8.51□□□□□ -1.05
MATR3-217ENST00000511333 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
MATR3-217ENST00000511333 DNAAF2Q9NVR5 837 aaKnown RBP8.51□□□□□ -1.05
MATR3-217ENST00000511333 SPDYE3A6NKU9 549 aa8.5□□□□□ -1.05
MATR3-217ENST00000511333 MSX1P28360 303 aa8.5□□□□□ -1.05
MATR3-217ENST00000511333 EPS8L1Q8TE68 723 aa8.5□□□□□ -1.05
MATR3-217ENST00000511333 SCTRP47872 440 aa8.49□□□□□ -1.05
MATR3-217ENST00000511333 FMNL2Q96PY5 1086 aa8.49□□□□□ -1.05
MATR3-217ENST00000511333 FHDC1Q9C0D6 1143 aaPredicted RBP8.49□□□□□ -1.05
MATR3-217ENST00000511333 IL2RAP01589 272 aa8.48□□□□□ -1.05
MATR3-217ENST00000511333 YBX3P16989 372 aaKnown RBP eCLIP8.48□□□□□ -1.052e-9■■■■□ 20.8
MATR3-217ENST00000511333 FBXO31Q5XUX0 539 aaPredicted RBP8.48□□□□□ -1.05
MATR3-217ENST00000511333 FIGNL1Q6PIW4 674 aa8.48□□□□□ -1.05
MATR3-217ENST00000511333 HCN2Q9UL51 889 aa8.48□□□□□ -1.05
MATR3-217ENST00000511333 COBLO75128 1261 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 APBA3O96018 575 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 PHKA2P46019 1235 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 PLCB2Q00722 1185 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 CENPCQ03188 943 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 C4orf17Q53FE4 359 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 PRRT3Q5FWE3 981 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 CNKSR1Q969H4 720 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
MATR3-217ENST00000511333 GNRH1P01148 92 aa8.46□□□□□ -1.06
MATR3-217ENST00000511333 ZC3H15Q8WU90 426 aaKnown RBP8.46□□□□□ -1.06
MATR3-217ENST00000511333 NACC1Q96RE7 527 aa8.46□□□□□ -1.06
MATR3-217ENST00000511333 MDFIQ99750 246 aa8.46□□□□□ -1.06
MATR3-217ENST00000511333 COL17A1Q9UMD9 1497 aaPredicted RBP8.45□□□□□ -1.06
MATR3-217ENST00000511333 TXKP42681 527 aa8.45□□□□□ -1.06
MATR3-217ENST00000511333 RNF20Q5VTR2 975 aa8.45□□□□□ -1.06
MATR3-217ENST00000511333 ZSCAN10Q96SZ4 725 aaPredicted RBP8.45□□□□□ -1.06
MATR3-217ENST00000511333 PCDHGC4Q9Y5F7 938 aa8.45□□□□□ -1.06
MATR3-217ENST00000511333 GNASQ5JWF2 1037 aa8.44□□□□□ -1.06
MATR3-217ENST00000511333 HMX1Q9NP08 348 aaPredicted RBP8.44□□□□□ -1.06
MATR3-217ENST00000511333 PAX4O43316 350 aa8.43□□□□□ -1.06
MATR3-217ENST00000511333 COL9A3Q14050 684 aaPredicted RBP8.43□□□□□ -1.06
MATR3-217ENST00000511333 ZNF468Q5VIY5 522 aaPredicted RBP8.43□□□□□ -1.06
MATR3-217ENST00000511333 RAB6BQ9NRW1 208 aa8.43□□□□□ -1.06
MATR3-217ENST00000511333 NLRP8Q86W28 1048 aa8.42□□□□□ -1.06
MATR3-217ENST00000511333 XAGE2Q96GT9 111 aa8.42□□□□□ -1.06
MATR3-217ENST00000511333 KRTAP4-2Q9BYR5 136 aa8.42□□□□□ -1.06
MATR3-217ENST00000511333 ZCCHC2Q9C0B9 1178 aaKnown RBP8.42□□□□□ -1.06
MATR3-217ENST00000511333 PRDM6Q9NQX0 595 aa8.42□□□□□ -1.06
MATR3-217ENST00000511333 POLR3EQ9NVU0 708 aa8.42□□□□□ -1.06
MATR3-217ENST00000511333 AK7Q96M32 723 aa8.41□□□□□ -1.06
MATR3-217ENST00000511333 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.41□□□□□ -1.06
MATR3-217ENST00000511333 TNP2Q05952 138 aa8.39□□□□□ -1.07
MATR3-217ENST00000511333 ADGRE1Q14246 886 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms