RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
UBE2D3-230ENST00000510599 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
UBE2D3-230ENST00000510599 CFHR5Q9BXR6 569 aa8.23□□□□□ -1.09
UBE2D3-230ENST00000510599 OXCT2Q9BYC2 517 aaPredicted RBP8.23□□□□□ -1.09
UBE2D3-230ENST00000510599 IL2RAP01589 272 aa8.22□□□□□ -1.09
UBE2D3-230ENST00000510599 CENPCQ03188 943 aa8.22□□□□□ -1.09
UBE2D3-230ENST00000510599 GNASQ5JWF2 1037 aa8.22□□□□□ -1.09
UBE2D3-230ENST00000510599 GPAMQ9HCL2 828 aa8.22□□□□□ -1.09
UBE2D3-230ENST00000510599 LBRQ14739 615 aaKnown RBP8.21□□□□□ -1.1
UBE2D3-230ENST00000510599 ESCO1Q5FWF5 840 aa8.21□□□□□ -1.1
UBE2D3-230ENST00000510599 CEP126Q9P2H0 1117 aa8.21□□□□□ -1.1
UBE2D3-230ENST00000510599 CSB-PGBD3P0DP91 1061 aa8.2□□□□□ -1.1
UBE2D3-230ENST00000510599 TMEM214Q6NUQ4 689 aaKnown RBP8.2□□□□□ -1.1
UBE2D3-230ENST00000510599 PGBD3Q8N328 593 aa8.2□□□□□ -1.1
UBE2D3-230ENST00000510599 PHKA2P46019 1235 aa8.19□□□□□ -1.1
UBE2D3-230ENST00000510599 CCDC85AQ96PX6 553 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-230ENST00000510599 SPOCK3Q9BQ16 436 aa8.19□□□□□ -1.1
UBE2D3-230ENST00000510599 GDF2Q9UK05 429 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-230ENST00000510599 THBS1P07996 1170 aa8.18□□□□□ -1.1
UBE2D3-230ENST00000510599 EFHC2Q5JST6 749 aa8.18□□□□□ -1.1
UBE2D3-230ENST00000510599 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
UBE2D3-230ENST00000510599 XAGE2Q96GT9 111 aa8.18□□□□□ -1.1
UBE2D3-230ENST00000510599 CDCA7Q9BWT1 371 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-230ENST00000510599 FHDC1Q9C0D6 1143 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-230ENST00000510599 SNRKQ9NRH2 765 aa8.18□□□□□ -1.1
UBE2D3-230ENST00000510599 HRH3Q9Y5N1 445 aa8.18□□□□□ -1.1
UBE2D3-230ENST00000510599 BRPF1P55201 1214 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-230ENST00000510599 EIF4G2P78344 907 aaKnown RBP eCLIP8.17□□□□□ -1.1
UBE2D3-230ENST00000510599 C4orf17Q53FE4 359 aa8.17□□□□□ -1.1
UBE2D3-230ENST00000510599 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
UBE2D3-230ENST00000510599 MKL2Q9ULH7 1088 aa8.17□□□□□ -1.1
UBE2D3-230ENST00000510599 DOLKQ9UPQ8 538 aa8.17□□□□□ -1.1
UBE2D3-230ENST00000510599 ALYREFQ86V81 257 aaKnown RBP8.16□□□□□ -1.1
UBE2D3-230ENST00000510599 GOLGA6L1Q8N7Z2 621 aa8.16□□□□□ -1.1
UBE2D3-230ENST00000510599 RHBDD1Q8TEB9 315 aa8.16□□□□□ -1.1
UBE2D3-230ENST00000510599 KLRG1Q96E93 195 aa8.16□□□□□ -1.1
UBE2D3-230ENST00000510599 RUBCNLQ9H714 662 aa8.16□□□□□ -1.1
UBE2D3-230ENST00000510599 ATXN7L1Q9ULK2 861 aaPredicted RBP8.16□□□□□ -1.1
UBE2D3-230ENST00000510599 SHISA8B8ZZ34 492 aa8.15□□□□□ -1.1
UBE2D3-230ENST00000510599 PROCP04070 461 aa8.15□□□□□ -1.1
UBE2D3-230ENST00000510599 USP4Q13107 963 aa8.15□□□□□ -1.1
UBE2D3-230ENST00000510599 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
UBE2D3-230ENST00000510599 ADAM23O75077 832 aa8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 ITGB2P05107 769 aa8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 BMP4P12644 408 aa8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 MSX1P28360 303 aa8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 SNRPNP63162 240 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 UBAP2LQ14157 1087 aaKnown RBP8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 TLR1Q15399 786 aa8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 EDARADDQ8WWZ3 215 aa8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 RRAGCQ9HB90 399 aa8.14□□□□□ -1.11
UBE2D3-230ENST00000510599 RNF135Q8IUD6 432 aa8.13□□□□□ -1.11
UBE2D3-230ENST00000510599 ETNK1Q9HBU6 452 aa8.13□□□□□ -1.11
UBE2D3-230ENST00000510599 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
UBE2D3-230ENST00000510599 PIK3R2O00459 728 aa8.12□□□□□ -1.11
UBE2D3-230ENST00000510599 FGFR3P22607 806 aa8.12□□□□□ -1.11
UBE2D3-230ENST00000510599 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
UBE2D3-230ENST00000510599 SLCO4C1Q6ZQN7 724 aa8.12□□□□□ -1.11
UBE2D3-230ENST00000510599 TBC1D9Q6ZT07 1266 aa8.12□□□□□ -1.11
UBE2D3-230ENST00000510599 PPARGC1BQ86YN6 1023 aaKnown RBP8.12□□□□□ -1.11
UBE2D3-230ENST00000510599 CRISPLD1Q9H336 500 aa8.12□□□□□ -1.11
UBE2D3-230ENST00000510599 AMPD1P23109 780 aa8.11□□□□□ -1.11
UBE2D3-230ENST00000510599 FIGNL1Q6PIW4 674 aa8.11□□□□□ -1.11
UBE2D3-230ENST00000510599 C1orf229Q6ZS94 237 aaPredicted RBP8.11□□□□□ -1.11
UBE2D3-230ENST00000510599 ABHD17AQ96GS6 310 aa8.11□□□□□ -1.11
UBE2D3-230ENST00000510599 PLA2G4AP47712 749 aa8.1□□□□□ -1.11
UBE2D3-230ENST00000510599 PHTF2Q8N3S3 785 aa8.1□□□□□ -1.11
UBE2D3-230ENST00000510599 C1orf216Q8TAB5 229 aa8.1□□□□□ -1.11
UBE2D3-230ENST00000510599 NDFIP2Q9NV92 336 aa8.1□□□□□ -1.11
UBE2D3-230ENST00000510599 BNIP3LO60238 219 aa8.09□□□□□ -1.11
UBE2D3-230ENST00000510599 GGA1Q9UJY5 639 aa8.09□□□□□ -1.11
UBE2D3-230ENST00000510599 KRBA1A5PL33 1030 aa8.08□□□□□ -1.12
UBE2D3-230ENST00000510599 STAU1O95793 577 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-230ENST00000510599 GRIN2CQ14957 1233 aa8.08□□□□□ -1.12
UBE2D3-230ENST00000510599 TSGA10IPQ3SY00 556 aa8.08□□□□□ -1.12
UBE2D3-230ENST00000510599 K7ELQ4 463 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-230ENST00000510599 C2CD2LO14523 706 aa8.07□□□□□ -1.12
UBE2D3-230ENST00000510599 INHAP05111 366 aa8.07□□□□□ -1.12
UBE2D3-230ENST00000510599 ARAFP10398 606 aa8.07□□□□□ -1.12
UBE2D3-230ENST00000510599 GDF10P55107 478 aa8.07□□□□□ -1.12
UBE2D3-230ENST00000510599 IRF5Q13568 498 aa8.07□□□□□ -1.12
UBE2D3-230ENST00000510599 NLRP8Q86W28 1048 aa8.07□□□□□ -1.12
UBE2D3-230ENST00000510599 CHIC2Q9UKJ5 165 aa8.07□□□□□ -1.12
UBE2D3-230ENST00000510599 GNB5O14775 395 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 SLC24A1O60721 1099 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 ATP4AP20648 1035 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 COL8A1P27658 744 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 BAG6P46379 1132 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 SCNN1DP51172 638 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 CTBSQ01459 385 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 MAP7D1Q3KQU3 841 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 NIFKQ9BYG3 293 aaKnown RBP8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 PCDHGC4Q9Y5F7 938 aa8.06□□□□□ -1.12
UBE2D3-230ENST00000510599 EPXP11678 715 aa8.05□□□□□ -1.12
UBE2D3-230ENST00000510599 VAC14Q08AM6 782 aa8.05□□□□□ -1.12
UBE2D3-230ENST00000510599 ZCCHC2Q9C0B9 1178 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-230ENST00000510599 DNAAF2Q9NVR5 837 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-230ENST00000510599 NOP53Q9NZM5 478 aaKnown RBP8.05□□□□□ -1.12
UBE2D3-230ENST00000510599 ATXN7O15265 892 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms