RNA–Protein interactions for RNA: ENST00000510385.5

TP53-213, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-213	ENST00000510385	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.81	□□□□□ -0.2
TP53-213	ENST00000510385	MAP3K5	Q99683	1374 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	RABEP1	Q15276	862 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	NBPF6	Q5VWK0	638 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	NBPF4	Q96M43	638 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	LGR6	Q9HBX8	967 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	LRRFIP2	Q9Y608	721 aa	Known RBP	13.8	□□□□□ -0.2
TP53-213	ENST00000510385	GNAI3	P08754	354 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	HDGFL1	Q5TGJ6	251 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	GBP4	Q96PP9	640 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	PIK3C2A	O00443	1686 aa		13.8	□□□□□ -0.2
TP53-213	ENST00000510385	ATP8B2	P98198	1209 aa		13.79	□□□□□ -0.2
TP53-213	ENST00000510385	XPC	Q01831	940 aa	Predicted RBP	13.79	□□□□□ -0.2
TP53-213	ENST00000510385	LRRCC1	Q9C099	1032 aa		13.79	□□□□□ -0.2
TP53-213	ENST00000510385	PANK2	Q9BZ23	570 aa		13.79	□□□□□ -0.2
TP53-213	ENST00000510385	FSD2	A1L4K1	749 aa		13.78	□□□□□ -0.2
TP53-213	ENST00000510385	LRRC59	Q96AG4	307 aa	Known RBP	13.78	□□□□□ -0.2
TP53-213	ENST00000510385	USP44	Q9H0E7	712 aa		13.78	□□□□□ -0.2
TP53-213	ENST00000510385	ANKAR	Q7Z5J8	1434 aa		13.78	□□□□□ -0.2
TP53-213	ENST00000510385	ERC2	O15083	957 aa		13.78	□□□□□ -0.2
TP53-213	ENST00000510385	KCNQ3	O43525	872 aa		13.78	□□□□□ -0.2
TP53-213	ENST00000510385	EIF5B	O60841	1220 aa	Known RBP	13.78	□□□□□ -0.2
TP53-213	ENST00000510385	ANKLE2	Q86XL3	938 aa		13.78	□□□□□ -0.2
TP53-213	ENST00000510385	IP6K1	Q92551	441 aa		13.78	□□□□□ -0.2
TP53-213	ENST00000510385	RILPL2	Q969X0	211 aa		13.78	□□□□□ -0.2
TP53-213	ENST00000510385	TRIM6-TRIM34	B2RNG4	842 aa		13.77	□□□□□ -0.21
TP53-213	ENST00000510385	LMOD2	Q6P5Q4	547 aa		13.77	□□□□□ -0.21
TP53-213	ENST00000510385	REC8	O95072	547 aa		13.76	□□□□□ -0.21
TP53-213	ENST00000510385	OSBPL3	Q9H4L5	887 aa		13.76	□□□□□ -0.21
TP53-213	ENST00000510385	IL1RAPL2	Q9NP60	686 aa		13.76	□□□□□ -0.21
TP53-213	ENST00000510385	ANXA1	P04083	346 aa		13.76	□□□□□ -0.21
TP53-213	ENST00000510385	UBTFL1	P0CB47	393 aa	Predicted RBP	13.76	□□□□□ -0.21
TP53-213	ENST00000510385	MX1	P20591	662 aa		13.75	□□□□□ -0.21
TP53-213	ENST00000510385	MPRIP	Q6WCQ1	1025 aa		13.75	□□□□□ -0.21
TP53-213	ENST00000510385	FMN2	Q9NZ56	1722 aa		13.75	□□□□□ -0.21
TP53-213	ENST00000510385	PKP1	Q13835	747 aa		13.74	□□□□□ -0.21
TP53-213	ENST00000510385	NUTM1	Q86Y26	1132 aa		13.74	□□□□□ -0.21
TP53-213	ENST00000510385	ZGPAT	Q8N5A5	531 aa	Known RBP	13.74	□□□□□ -0.21
TP53-213	ENST00000510385	CHPF2	Q9P2E5	772 aa		13.74	□□□□□ -0.21
TP53-213	ENST00000510385	NWD1	Q149M9	1564 aa		13.74	□□□□□ -0.21
TP53-213	ENST00000510385	ST18	O60284	1047 aa		13.74	□□□□□ -0.21
TP53-213	ENST00000510385	EIF4A1	P60842	406 aa	Known RBP	13.74	□□□□□ -0.21
TP53-213	ENST00000510385	ORAI2	Q96SN7	254 aa		13.74	□□□□□ -0.21
TP53-213	ENST00000510385	MAP4K4	O95819	1239 aa	Predicted RBP	13.73	□□□□□ -0.21
TP53-213	ENST00000510385	PPP1R42	Q7Z4L9	355 aa		13.73	□□□□□ -0.21
TP53-213	ENST00000510385	UNC5CL	Q8IV45	518 aa		13.73	□□□□□ -0.21
TP53-213	ENST00000510385	BABAM1	Q9NWV8	329 aa		13.73	□□□□□ -0.21
TP53-213	ENST00000510385	PI4KAP2	A4QPH2	592 aa		13.73	□□□□□ -0.21
TP53-213	ENST00000510385	SURF6	O75683	361 aa	Known RBP	13.73	□□□□□ -0.21
TP53-213	ENST00000510385	BAG4	O95429	457 aa	Known RBP	13.73	□□□□□ -0.21
TP53-213	ENST00000510385	TEF	Q10587	303 aa		13.73	□□□□□ -0.21
TP53-213	ENST00000510385	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.73	□□□□□ -0.21
TP53-213	ENST00000510385	PI4KAP1	Q8N8J0	262 aa		13.73	□□□□□ -0.21
TP53-213	ENST00000510385	SRCIN1	Q9C0H9	1055 aa		13.73	□□□□□ -0.21
TP53-213	ENST00000510385	SALL3	Q9BXA9	1300 aa		13.73	□□□□□ -0.21
TP53-213	ENST00000510385	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.72	□□□□□ -0.21
TP53-213	ENST00000510385	BTBD11	A6QL63	1104 aa		13.72	□□□□□ -0.21
TP53-213	ENST00000510385	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.72	□□□□□ -0.21
TP53-213	ENST00000510385	NEK4	P51957	841 aa		13.72	□□□□□ -0.21
TP53-213	ENST00000510385	ESYT1	Q9BSJ8	1104 aa		13.72	□□□□□ -0.21
TP53-213	ENST00000510385	FER1L4	A9Z1Z3	1794 aa		13.72	□□□□□ -0.21
TP53-213	ENST00000510385	XRN1	Q8IZH2	1706 aa	Known RBP	13.72	□□□□□ -0.21
TP53-213	ENST00000510385	MCTP1	Q6DN14	999 aa		13.72	□□□□□ -0.21
TP53-213	ENST00000510385	GAS2L3	Q86XJ1	694 aa		13.72	□□□□□ -0.21
TP53-213	ENST00000510385	ANO2	Q9NQ90	1003 aa		13.72	□□□□□ -0.21
TP53-213	ENST00000510385	CHML	P26374	656 aa		13.71	□□□□□ -0.21
TP53-213	ENST00000510385	MRE11	P49959	708 aa		13.71	□□□□□ -0.21
TP53-213	ENST00000510385	FAM43A	Q8N2R8	423 aa		13.71	□□□□□ -0.21
TP53-213	ENST00000510385	GRPEL1	Q9HAV7	217 aa		13.71	□□□□□ -0.21
TP53-213	ENST00000510385	SRGAP3	O43295	1099 aa		13.71	□□□□□ -0.22
TP53-213	ENST00000510385	GC	P02774	474 aa		13.71	□□□□□ -0.22
TP53-213	ENST00000510385	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.71	□□□□□ -0.22
TP53-213	ENST00000510385	NOL8	Q76FK4	1167 aa	Known RBP	13.71	□□□□□ -0.22
TP53-213	ENST00000510385	KCNH5	Q8NCM2	988 aa		13.71	□□□□□ -0.22
TP53-213	ENST00000510385	GOLGA6L22	H0YM25	854 aa		13.7	□□□□□ -0.22
TP53-213	ENST00000510385	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.7	□□□□□ -0.22
TP53-213	ENST00000510385	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.7	□□□□□ -0.22
TP53-213	ENST00000510385	PALD1	Q9ULE6	856 aa		13.7	□□□□□ -0.22
TP53-213	ENST00000510385	SOS1	Q07889	1333 aa	Predicted RBP	13.7	□□□□□ -0.22
TP53-213	ENST00000510385	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.7	□□□□□ -0.22
TP53-213	ENST00000510385	SSH3	Q8TE77	659 aa		13.7	□□□□□ -0.22
TP53-213	ENST00000510385	DDX49	Q9Y6V7	483 aa	Known RBP	13.7	□□□□□ -0.22
TP53-213	ENST00000510385	SETD1B	Q9UPS6	1966 aa	Known RBP	13.7	□□□□□ -0.22
TP53-213	ENST00000510385	CEMIP	Q8WUJ3	1361 aa		13.69	□□□□□ -0.22
TP53-213	ENST00000510385	NCL	P19338	710 aa	Known RBP	13.69	□□□□□ -0.22
TP53-213	ENST00000510385	NUCB2	P80303	420 aa		13.69	□□□□□ -0.22
TP53-213	ENST00000510385	AKAP4	Q5JQC9	854 aa		13.69	□□□□□ -0.22
TP53-213	ENST00000510385	DNAAF4	Q8WXU2	420 aa		13.69	□□□□□ -0.22
TP53-213	ENST00000510385	CHAMP1	Q96JM3	812 aa		13.69	□□□□□ -0.22
TP53-213	ENST00000510385	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.69	□□□□□ -0.22
TP53-213	ENST00000510385	STAP2	Q9UGK3	403 aa		13.69	□□□□□ -0.22
TP53-213	ENST00000510385	BEND3	Q5T5X7	828 aa		13.69	□□□□□ -0.22
TP53-213	ENST00000510385	PRAMEF22	A3QJZ6	481 aa		13.68	□□□□□ -0.22
TP53-213	ENST00000510385	C1orf141	Q5JVX7	400 aa		13.68	□□□□□ -0.22
TP53-213	ENST00000510385	RHPN1	Q8TCX5	695 aa		13.68	□□□□□ -0.22
TP53-213	ENST00000510385	IL25	Q9H293	177 aa		13.68	□□□□□ -0.22
TP53-213	ENST00000510385	ANKRD24	Q8TF21	1146 aa		13.68	□□□□□ -0.22
TP53-213	ENST00000510385	CWC22	Q9HCG8	908 aa	Known RBP	13.68	□□□□□ -0.22
TP53-213	ENST00000510385	AXIN2	Q9Y2T1	843 aa		13.68	□□□□□ -0.22
TP53-213	ENST00000510385	PTMS	P20962	102 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms