RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 HSP90AB1P08238 724 aaKnown RBP14.35□□□□□ -0.11
DDX41-211ENST00000510171 TGFB2P61812 414 aa14.35□□□□□ -0.11
DDX41-211ENST00000510171 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
DDX41-211ENST00000510171 GOLGB1Q14789 3259 aaKnown RBP14.34□□□□□ -0.11
DDX41-211ENST00000510171 ADRA2BP18089 450 aa14.34□□□□□ -0.11
DDX41-211ENST00000510171 PLEKHO1Q53GL0 409 aaPredicted RBP14.34□□□□□ -0.11
DDX41-211ENST00000510171 RC3H1Q5TC82 1133 aaKnown RBP14.34□□□□□ -0.11
DDX41-211ENST00000510171 ARHGEF1Q92888 912 aaKnown RBP14.34□□□□□ -0.11
DDX41-211ENST00000510171 DCAF5Q96JK2 942 aa14.34□□□□□ -0.11
DDX41-211ENST00000510171 A0A0G2JLW4 131 aa14.33□□□□□ -0.12
DDX41-211ENST00000510171 SLC4A9Q96Q91 983 aa14.33□□□□□ -0.12
DDX41-211ENST00000510171 BCS1LQ9Y276 419 aa14.33□□□□□ -0.12
DDX41-211ENST00000510171 KIF3CO14782 793 aa14.32□□□□□ -0.12
DDX41-211ENST00000510171 RFC4P35249 363 aa14.32□□□□□ -0.12
DDX41-211ENST00000510171 CABP4P57796 275 aa14.32□□□□□ -0.12
DDX41-211ENST00000510171 CCDC87Q9NVE4 849 aa14.32□□□□□ -0.12
DDX41-211ENST00000510171 RPS6KA4O75676 772 aa14.31□□□□□ -0.12
DDX41-211ENST00000510171 AMOTQ4VCS5 1084 aa14.31□□□□□ -0.12
DDX41-211ENST00000510171 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
DDX41-211ENST00000510171 PARP3Q9Y6F1 533 aa14.31□□□□□ -0.12
DDX41-211ENST00000510171 TOGARAM1Q9Y4F4 1720 aa14.31□□□□□ -0.12
DDX41-211ENST00000510171 CLSPNQ9HAW4 1339 aa14.31□□□□□ -0.12
DDX41-211ENST00000510171 PLEKHG2Q9H7P9 1386 aa14.31□□□□□ -0.12
DDX41-211ENST00000510171 PKD1L3Q7Z443 1732 aa14.3□□□□□ -0.12
DDX41-211ENST00000510171 GYS1P13807 737 aa14.3□□□□□ -0.12
DDX41-211ENST00000510171 MTHFSP49914 203 aa14.3□□□□□ -0.12
DDX41-211ENST00000510171 ZNF530Q6P9A1 599 aaPredicted RBP14.3□□□□□ -0.12
DDX41-211ENST00000510171 CNTNAP4Q9C0A0 1308 aa14.3□□□□□ -0.12
DDX41-211ENST00000510171 KDRP35968 1356 aa14.3□□□□□ -0.12
DDX41-211ENST00000510171 KIF20BQ96Q89 1820 aa14.29□□□□□ -0.12
DDX41-211ENST00000510171 FCHSD2O94868 740 aa14.29□□□□□ -0.12
DDX41-211ENST00000510171 DPEP1P16444 411 aa14.29□□□□□ -0.12
DDX41-211ENST00000510171 PANK3Q9H999 370 aa14.29□□□□□ -0.12
DDX41-211ENST00000510171 PXDNLA1KZ92 1463 aa14.29□□□□□ -0.12
DDX41-211ENST00000510171 TAF1LQ8IZX4 1826 aa14.29□□□□□ -0.12
DDX41-211ENST00000510171 PTCD1O75127 700 aaKnown RBP14.28□□□□□ -0.12
DDX41-211ENST00000510171 C1orf141Q5JVX7 400 aa14.28□□□□□ -0.12
DDX41-211ENST00000510171 ITGB4P16144 1822 aa14.27□□□□□ -0.12
DDX41-211ENST00000510171 TOMM70O94826 608 aa14.27□□□□□ -0.13
DDX41-211ENST00000510171 MORC1Q86VD1 984 aa14.27□□□□□ -0.13
DDX41-211ENST00000510171 NFATC2IPQ8NCF5 419 aa14.27□□□□□ -0.13
DDX41-211ENST00000510171 UBR3Q6ZT12 1888 aa14.27□□□□□ -0.13
DDX41-211ENST00000510171 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.13
DDX41-211ENST00000510171 APLP1P51693 650 aa14.26□□□□□ -0.13
DDX41-211ENST00000510171 EIF4G2P78344 907 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDX41-211ENST00000510171 C10orf71Q711Q0 1435 aa14.25□□□□□ -0.13
DDX41-211ENST00000510171 KCNA3P22001 575 aa14.25□□□□□ -0.13
DDX41-211ENST00000510171 CRKLP46109 303 aaKnown RBP14.25□□□□□ -0.13
DDX41-211ENST00000510171 SULT6B1Q6IMI4 303 aa14.25□□□□□ -0.13
DDX41-211ENST00000510171 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
DDX41-211ENST00000510171 PIM2Q9P1W9 311 aa14.25□□□□□ -0.13
DDX41-211ENST00000510171 HSPA5P11021 654 aaKnown RBP14.24□□□□□ -0.13
DDX41-211ENST00000510171 FKBP8Q14318 412 aa14.24□□□□□ -0.13
DDX41-211ENST00000510171 C9orf131Q5VYM1 1079 aa14.24□□□□□ -0.13
DDX41-211ENST00000510171 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
DDX41-211ENST00000510171 SRP68Q9UHB9 627 aaKnown RBP14.24□□□□□ -0.13
DDX41-211ENST00000510171 KDM6AO15550 1401 aaPredicted RBP14.24□□□□□ -0.13
DDX41-211ENST00000510171 DALRD3Q5D0E6 543 aaKnown RBP14.23□□□□□ -0.13
DDX41-211ENST00000510171 NMRK2Q9NPI5 230 aa14.23□□□□□ -0.13
DDX41-211ENST00000510171 ANKRD26Q9UPS8 1709 aa14.23□□□□□ -0.13
DDX41-211ENST00000510171 CICQ96RK0 1608 aaPredicted RBP14.23□□□□□ -0.13
DDX41-211ENST00000510171 C16orf71Q8IYS4 520 aaPredicted RBP14.22□□□□□ -0.13
DDX41-211ENST00000510171 USP42Q9H9J4 1324 aaKnown RBP14.21□□□□□ -0.13
DDX41-211ENST00000510171 CEP350Q5VT06 3117 aa14.21□□□□□ -0.13
DDX41-211ENST00000510171 IL13P35225 146 aa14.21□□□□□ -0.13
DDX41-211ENST00000510171 DDR1Q08345 913 aa14.21□□□□□ -0.13
DDX41-211ENST00000510171 AKAP4Q5JQC9 854 aa14.21□□□□□ -0.13
DDX41-211ENST00000510171 INTS5Q6P9B9 1019 aaKnown RBP14.21□□□□□ -0.13
DDX41-211ENST00000510171 DNAJC5GQ8N7S2 189 aa14.21□□□□□ -0.13
DDX41-211ENST00000510171 KNSTRNQ9Y448 316 aa14.21□□□□□ -0.13
DDX41-211ENST00000510171 ZPR1O75312 459 aa14.2□□□□□ -0.14
DDX41-211ENST00000510171 TM4SF1P30408 202 aa14.2□□□□□ -0.14
DDX41-211ENST00000510171 RBM46Q8TBY0 533 aaKnown RBP14.2□□□□□ -0.14
DDX41-211ENST00000510171 POLRMTO00411 1230 aaKnown RBP14.19□□□□□ -0.14
DDX41-211ENST00000510171 CHRNA5P30532 468 aa14.19□□□□□ -0.14
DDX41-211ENST00000510171 USPL1Q5W0Q7 1092 aa14.19□□□□□ -0.14
DDX41-211ENST00000510171 DNAJC10Q8IXB1 793 aa14.19□□□□□ -0.14
DDX41-211ENST00000510171 RNF181Q9P0P0 153 aa14.19□□□□□ -0.14
DDX41-211ENST00000510171 KDM2BQ8NHM5 1336 aa14.18□□□□□ -0.14
DDX41-211ENST00000510171 SLC52A2Q9HAB3 445 aa14.18□□□□□ -0.14
DDX41-211ENST00000510171 LGR6Q9HBX8 967 aa14.18□□□□□ -0.14
DDX41-211ENST00000510171 FSTL1Q12841 308 aa14.17□□□□□ -0.14
DDX41-211ENST00000510171 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
DDX41-211ENST00000510171 C4AP0C0L4 1744 aa14.16□□□□□ -0.14
DDX41-211ENST00000510171 RNMTO43148 476 aaKnown RBP14.16□□□□□ -0.14
DDX41-211ENST00000510171 CYP19A1P11511 503 aaPredicted RBP14.16□□□□□ -0.14
DDX41-211ENST00000510171 SLC39A6Q13433 755 aa14.16□□□□□ -0.14
DDX41-211ENST00000510171 RRAGCQ9HB90 399 aa14.16□□□□□ -0.14
DDX41-211ENST00000510171 SOS1Q07889 1333 aaPredicted RBP14.15□□□□□ -0.14
DDX41-211ENST00000510171 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
DDX41-211ENST00000510171 HMOX1P09601 288 aa14.14□□□□□ -0.15
DDX41-211ENST00000510171 NFIXQ14938 502 aa14.14□□□□□ -0.15
DDX41-211ENST00000510171 AMER1Q5JTC6 1135 aaPredicted RBP14.14□□□□□ -0.15
DDX41-211ENST00000510171 CCER1Q8TC90 406 aaPredicted RBP14.14□□□□□ -0.15
DDX41-211ENST00000510171 NARFQ9UHQ1 456 aa14.14□□□□□ -0.15
DDX41-211ENST00000510171 VSIG10Q8N0Z9 540 aa14.13□□□□□ -0.15
DDX41-211ENST00000510171 N4BP2Q86UW6 1770 aaPredicted RBP14.13□□□□□ -0.15
DDX41-211ENST00000510171 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
DDX41-211ENST00000510171 SERPINB2P05120 415 aa14.12□□□□□ -0.15
DDX41-211ENST00000510171 HTRA3P83110 453 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms