RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	SLC12A5	Q9H2X9	1139 aa		12.15	□□□□□ -0.46
RACK1-222	ENST00000509535	RNF181	Q9P0P0	153 aa		12.15	□□□□□ -0.46
RACK1-222	ENST00000509535		A0A1W2PP64	1363 aa		12.15	□□□□□ -0.46
RACK1-222	ENST00000509535	ROCK2	O75116	1388 aa	Known RBP	12.15	□□□□□ -0.46
RACK1-222	ENST00000509535	TIAM2	Q8IVF5	1701 aa		12.14	□□□□□ -0.47
RACK1-222	ENST00000509535	TAT	P17735	454 aa	Predicted RBP	12.14	□□□□□ -0.47
RACK1-222	ENST00000509535	FBLN1	P23142	703 aa		12.14	□□□□□ -0.47
RACK1-222	ENST00000509535	MYH14	Q7Z406	1995 aa	Known RBP	12.14	□□□□□ -0.47
RACK1-222	ENST00000509535	COL5A3	P25940	1745 aa	Predicted RBP	12.14	□□□□□ -0.47
RACK1-222	ENST00000509535	LOC102724428	A0A0B4J2F2	783 aa		12.13	□□□□□ -0.47
RACK1-222	ENST00000509535	CYP27B1	O15528	508 aa		12.13	□□□□□ -0.47
RACK1-222	ENST00000509535	KCNA3	P22001	575 aa		12.13	□□□□□ -0.47
RACK1-222	ENST00000509535	SIK1	P57059	783 aa		12.13	□□□□□ -0.47
RACK1-222	ENST00000509535	CCER1	Q8TC90	406 aa	Predicted RBP	12.13	□□□□□ -0.47
RACK1-222	ENST00000509535	PIGB	Q92521	554 aa		12.13	□□□□□ -0.47
RACK1-222	ENST00000509535	CCDC87	Q9NVE4	849 aa		12.13	□□□□□ -0.47
RACK1-222	ENST00000509535	TERF2IP	Q9NYB0	399 aa		12.13	□□□□□ -0.47
RACK1-222	ENST00000509535	SMG6	Q86US8	1419 aa	Known RBP	12.12	□□□□□ -0.47
RACK1-222	ENST00000509535	NLGN1	Q8N2Q7	840 aa		12.12	□□□□□ -0.47
RACK1-222	ENST00000509535	COG3	Q96JB2	828 aa		12.12	□□□□□ -0.47
RACK1-222	ENST00000509535	TIMELESS	Q9UNS1	1208 aa		12.12	□□□□□ -0.47
RACK1-222	ENST00000509535	RTL1	A6NKG5	1358 aa		12.12	□□□□□ -0.47
RACK1-222	ENST00000509535	ZNF831	Q5JPB2	1677 aa		12.11	□□□□□ -0.47
RACK1-222	ENST00000509535	TMF1	P82094	1093 aa		12.11	□□□□□ -0.47
RACK1-222	ENST00000509535	ITPK1	Q13572	414 aa		12.11	□□□□□ -0.47
RACK1-222	ENST00000509535	DCAF5	Q96JK2	942 aa		12.11	□□□□□ -0.47
RACK1-222	ENST00000509535	PIM2	Q9P1W9	311 aa		12.11	□□□□□ -0.47
RACK1-222	ENST00000509535	PCDH10	Q9P2E7	1040 aa		12.11	□□□□□ -0.47
RACK1-222	ENST00000509535	DICER1	Q9UPY3	1922 aa	Known RBP	12.1	□□□□□ -0.47
RACK1-222	ENST00000509535	ATP6V1A	P38606	617 aa		12.1	□□□□□ -0.47
RACK1-222	ENST00000509535	NEUROD1	Q13562	356 aa		12.1	□□□□□ -0.47
RACK1-222	ENST00000509535	RRS1	Q15050	365 aa	Known RBP	12.09	□□□□□ -0.47
RACK1-222	ENST00000509535	DALRD3	Q5D0E6	543 aa	Known RBP	12.09	□□□□□ -0.47
RACK1-222	ENST00000509535	TRAPPC3L	Q5T215	181 aa		12.09	□□□□□ -0.47
RACK1-222	ENST00000509535	PARP3	Q9Y6F1	533 aa		12.09	□□□□□ -0.47
RACK1-222	ENST00000509535	VIRMA	Q69YN4	1812 aa	Known RBP	12.09	□□□□□ -0.47
RACK1-222	ENST00000509535	DLEC1	Q9Y238	1755 aa		12.08	□□□□□ -0.48
RACK1-222	ENST00000509535	VEGFA	P15692	232 aa	Predicted RBP	12.08	□□□□□ -0.48
RACK1-222	ENST00000509535	ASAP1	Q9ULH1	1129 aa		12.08	□□□□□ -0.48
RACK1-222	ENST00000509535	RTCB	Q9Y3I0	505 aa	Known RBP	12.08	□□□□□ -0.48
RACK1-222	ENST00000509535	AFDN	P55196	1824 aa	Known RBP	12.08	□□□□□ -0.48
RACK1-222	ENST00000509535	KIF20B	Q96Q89	1820 aa		12.08	□□□□□ -0.48
RACK1-222	ENST00000509535	FOXN1	O15353	648 aa		12.07	□□□□□ -0.48
RACK1-222	ENST00000509535	GYS1	P13807	737 aa		12.07	□□□□□ -0.48
RACK1-222	ENST00000509535	FAM161A	Q3B820	660 aa		12.07	□□□□□ -0.48
RACK1-222	ENST00000509535	TMOD3	Q9NYL9	352 aa		12.07	□□□□□ -0.48
RACK1-222	ENST00000509535	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.07	□□□□□ -0.48
RACK1-222	ENST00000509535	KDM6A	O15550	1401 aa	Predicted RBP	12.06	□□□□□ -0.48
RACK1-222	ENST00000509535	GLTPD2	A6NH11	291 aa		12.06	□□□□□ -0.48
RACK1-222	ENST00000509535	NKX1-1	Q15270	411 aa	Predicted RBP	12.06	□□□□□ -0.48
RACK1-222	ENST00000509535	ARHGEF1	Q92888	912 aa	Known RBP	12.06	□□□□□ -0.48
RACK1-222	ENST00000509535	PRDM10	Q9NQV6	1147 aa		12.06	□□□□□ -0.48
RACK1-222	ENST00000509535	MKRN1	Q9UHC7	482 aa	Known RBP	12.06	□□□□□ -0.48
RACK1-222	ENST00000509535	PDE4DIP	Q5VU43	2346 aa		12.05	□□□□□ -0.48
RACK1-222	ENST00000509535	ADRA2B	P18089	450 aa		12.05	□□□□□ -0.48
RACK1-222	ENST00000509535	RFC4	P35249	363 aa		12.05	□□□□□ -0.48
RACK1-222	ENST00000509535	RASSF7	Q02833	373 aa		12.05	□□□□□ -0.48
RACK1-222	ENST00000509535	HSP90AB2P	Q58FF8	381 aa		12.05	□□□□□ -0.48
RACK1-222	ENST00000509535	INSR	P06213	1382 aa		12.05	□□□□□ -0.48
RACK1-222	ENST00000509535	KDR	P35968	1356 aa		12.05	□□□□□ -0.48
RACK1-222	ENST00000509535	TONSL	Q96HA7	1378 aa		12.05	□□□□□ -0.48
RACK1-222	ENST00000509535	CHRNA5	P30532	468 aa		12.04	□□□□□ -0.48
RACK1-222	ENST00000509535	ATG3	Q9NT62	314 aa		12.04	□□□□□ -0.48
RACK1-222	ENST00000509535	LMNB1	P20700	586 aa		12.03	□□□□□ -0.48
RACK1-222	ENST00000509535	CREBZF	Q9NS37	354 aa		12.03	□□□□□ -0.48
RACK1-222	ENST00000509535	SPG7	Q9UQ90	795 aa		12.03	□□□□□ -0.48
RACK1-222	ENST00000509535	FLT4	P35916	1363 aa		12.03	□□□□□ -0.48
RACK1-222	ENST00000509535	CTCF	P49711	727 aa	Predicted RBP	12.02	□□□□□ -0.49
RACK1-222	ENST00000509535	RC3H1	Q5TC82	1133 aa	Known RBP	12.02	□□□□□ -0.49
RACK1-222	ENST00000509535	TNRC18	O15417	2968 aa	Predicted RBP	12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	ANKRD26	Q9UPS8	1709 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	RPS6KA4	O75676	772 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	DDR1	Q08345	913 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	AIDA	Q96BJ3	306 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	PUS7	Q96PZ0	661 aa	Known RBP	12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	SLC4A9	Q96Q91	983 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	CNTNAP4	Q9C0A0	1308 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	FER1L6	Q2WGJ9	1857 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	CNTNAP1	P78357	1384 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	NCAPD2	Q15021	1401 aa		12.01	□□□□□ -0.49
RACK1-222	ENST00000509535	ADAMTS7	Q9UKP4	1686 aa		12	□□□□□ -0.49
RACK1-222	ENST00000509535	CACNA1S	Q13698	1873 aa		12	□□□□□ -0.49
RACK1-222	ENST00000509535	POTEC	B2RU33	542 aa		12	□□□□□ -0.49
RACK1-222	ENST00000509535	ABHD8	Q96I13	439 aa		12	□□□□□ -0.49
RACK1-222	ENST00000509535	RBM42	Q9BTD8	480 aa	Known RBP	12	□□□□□ -0.49
RACK1-222	ENST00000509535	GGNBP2	Q9H3C7	697 aa		12	□□□□□ -0.49
RACK1-222	ENST00000509535	FYB1	O15117	783 aa		11.99	□□□□□ -0.49
RACK1-222	ENST00000509535	LBX1	P52954	281 aa		11.99	□□□□□ -0.49
RACK1-222	ENST00000509535	FKBP8	Q14318	412 aa		11.99	□□□□□ -0.49
RACK1-222	ENST00000509535	CARD11	Q9BXL7	1154 aa		11.99	□□□□□ -0.49
RACK1-222	ENST00000509535	SRP68	Q9UHB9	627 aa	Known RBP	11.99	□□□□□ -0.49
RACK1-222	ENST00000509535	KIF24	Q5T7B8	1368 aa		11.99	□□□□□ -0.49
RACK1-222	ENST00000509535	TJP1	Q07157	1748 aa		11.99	□□□□□ -0.49
RACK1-222	ENST00000509535	NRXN2	Q9P2S2	1712 aa		11.99	□□□□□ -0.49
RACK1-222	ENST00000509535	SCN4A	P35499	1836 aa		11.98	□□□□□ -0.49
RACK1-222	ENST00000509535	PHKG2	P15735	406 aa		11.98	□□□□□ -0.49
RACK1-222	ENST00000509535	MLLT1	Q03111	559 aa	Predicted RBP	11.98	□□□□□ -0.49
RACK1-222	ENST00000509535	CHADL	Q6NUI6	762 aa		11.98	□□□□□ -0.49
RACK1-222	ENST00000509535	IFNL2	Q8IZJ0	200 aa		11.98	□□□□□ -0.49
RACK1-222	ENST00000509535	USP42	Q9H9J4	1324 aa	Known RBP	11.97	□□□□□ -0.49

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