RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 NDUFB9Q9Y6M9 179 aa7.48□□□□□ -1.21
SMARCA5-202ENST00000508573 ZSCAN10Q96SZ4 725 aaPredicted RBP7.47□□□□□ -1.21
SMARCA5-202ENST00000508573 ESYT1Q9BSJ8 1104 aa7.47□□□□□ -1.21
SMARCA5-202ENST00000508573 GPAMQ9HCL2 828 aa7.47□□□□□ -1.21
SMARCA5-202ENST00000508573 MYCP01106 439 aaPredicted RBP7.46□□□□□ -1.22
SMARCA5-202ENST00000508573 IL2RAP01589 272 aa7.46□□□□□ -1.22
SMARCA5-202ENST00000508573 MTMR14Q8NCE2 650 aa7.46□□□□□ -1.22
SMARCA5-202ENST00000508573 DCAF5Q96JK2 942 aa7.46□□□□□ -1.22
SMARCA5-202ENST00000508573 MSTNO14793 375 aa7.45□□□□□ -1.22
SMARCA5-202ENST00000508573 GTF2E1P29083 439 aaPredicted RBP7.45□□□□□ -1.22
SMARCA5-202ENST00000508573 PLA2G4EQ3MJ16 856 aa7.45□□□□□ -1.22
SMARCA5-202ENST00000508573 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
SMARCA5-202ENST00000508573 NPM2Q86SE8 214 aaKnown RBP7.45□□□□□ -1.22
SMARCA5-202ENST00000508573 XAGE2Q96GT9 111 aa7.45□□□□□ -1.22
SMARCA5-202ENST00000508573 CCDC85AQ96PX6 553 aaPredicted RBP7.45□□□□□ -1.22
SMARCA5-202ENST00000508573 CFHR5Q9BXR6 569 aa7.45□□□□□ -1.22
SMARCA5-202ENST00000508573 SUPT5HO00267 1087 aaKnown RBP7.44□□□□□ -1.22
SMARCA5-202ENST00000508573 OIP5O43482 229 aa7.44□□□□□ -1.22
SMARCA5-202ENST00000508573 TSGA10IPQ3SY00 556 aa7.44□□□□□ -1.22
SMARCA5-202ENST00000508573 OXCT2Q9BYC2 517 aaPredicted RBP7.44□□□□□ -1.22
SMARCA5-202ENST00000508573 GPR37L1O60883 481 aa7.43□□□□□ -1.22
SMARCA5-202ENST00000508573 MAP2K3P46734 347 aa7.43□□□□□ -1.22
SMARCA5-202ENST00000508573 BRPF1P55201 1214 aaPredicted RBP7.43□□□□□ -1.22
SMARCA5-202ENST00000508573 GNASQ5JWF2 1037 aa7.43□□□□□ -1.22
SMARCA5-202ENST00000508573 GALNT6Q8NCL4 622 aa7.43□□□□□ -1.22
SMARCA5-202ENST00000508573 KLRG1Q96E93 195 aa7.43□□□□□ -1.22
SMARCA5-202ENST00000508573 PHF24Q9UPV7 400 aa7.43□□□□□ -1.22
SMARCA5-202ENST00000508573 APBB1O00213 710 aa7.42□□□□□ -1.22
SMARCA5-202ENST00000508573 THBS1P07996 1170 aa7.42□□□□□ -1.22
SMARCA5-202ENST00000508573 CSB-PGBD3P0DP91 1061 aa7.42□□□□□ -1.22
SMARCA5-202ENST00000508573 PGBD3Q8N328 593 aa7.42□□□□□ -1.22
SMARCA5-202ENST00000508573 RUBCNLQ9H714 662 aa7.42□□□□□ -1.22
SMARCA5-202ENST00000508573 LRRC4BQ9NT99 713 aa7.42□□□□□ -1.22
SMARCA5-202ENST00000508573 A0A1B0GTH6 734 aa7.41□□□□□ -1.22
SMARCA5-202ENST00000508573 MSX1P28360 303 aa7.41□□□□□ -1.22
SMARCA5-202ENST00000508573 SNRPNP63162 240 aaKnown RBP7.41□□□□□ -1.22
SMARCA5-202ENST00000508573 USP4Q13107 963 aa7.41□□□□□ -1.22
SMARCA5-202ENST00000508573 C4orf17Q53FE4 359 aa7.41□□□□□ -1.22
SMARCA5-202ENST00000508573 ESCO1Q5FWF5 840 aa7.41□□□□□ -1.22
SMARCA5-202ENST00000508573 RRAGCQ9HB90 399 aa7.41□□□□□ -1.22
SMARCA5-202ENST00000508573 HRH3Q9Y5N1 445 aa7.41□□□□□ -1.22
SMARCA5-202ENST00000508573 SOCS7O14512 581 aa7.4□□□□□ -1.22
SMARCA5-202ENST00000508573 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
SMARCA5-202ENST00000508573 TRIM26Q12899 539 aaPredicted RBP7.4□□□□□ -1.22
SMARCA5-202ENST00000508573 C1orf229Q6ZS94 237 aaPredicted RBP7.4□□□□□ -1.22
SMARCA5-202ENST00000508573 EDARADDQ8WWZ3 215 aa7.4□□□□□ -1.22
SMARCA5-202ENST00000508573 SPOCK3Q9BQ16 436 aa7.4□□□□□ -1.22
SMARCA5-202ENST00000508573 FHDC1Q9C0D6 1143 aaPredicted RBP7.4□□□□□ -1.22
SMARCA5-202ENST00000508573 SHISA8B8ZZ34 492 aa7.39□□□□□ -1.23
SMARCA5-202ENST00000508573 ITGB2P05107 769 aa7.39□□□□□ -1.23
SMARCA5-202ENST00000508573 EIF4G2P78344 907 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMARCA5-202ENST00000508573 SLFNL1Q499Z3 407 aa7.39□□□□□ -1.23
SMARCA5-202ENST00000508573 EFHC2Q5JST6 749 aa7.39□□□□□ -1.23
SMARCA5-202ENST00000508573 PRM3Q9NNZ6 103 aa7.39□□□□□ -1.23
SMARCA5-202ENST00000508573 TBC1D2BQ9UPU7 963 aa7.39□□□□□ -1.23
SMARCA5-202ENST00000508573 BMP4P12644 408 aa7.38□□□□□ -1.23
SMARCA5-202ENST00000508573 PHTF2Q8N3S3 785 aa7.38□□□□□ -1.23
SMARCA5-202ENST00000508573 DOLKQ9UPQ8 538 aa7.38□□□□□ -1.23
SMARCA5-202ENST00000508573 C2CD2LO14523 706 aa7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 CTBSQ01459 385 aa7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 UBAP2LQ14157 1087 aaKnown RBP7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 OXLD1Q5BKU9 147 aa7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 RNF135Q8IUD6 432 aa7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 ABHD17AQ96GS6 310 aa7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 ETNK1Q9HBU6 452 aa7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 GDF2Q9UK05 429 aaPredicted RBP7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 MKL2Q9ULH7 1088 aa7.37□□□□□ -1.23
SMARCA5-202ENST00000508573 ADAM23O75077 832 aa7.36□□□□□ -1.23
SMARCA5-202ENST00000508573 AMPD1P23109 780 aa7.36□□□□□ -1.23
SMARCA5-202ENST00000508573 LBRQ14739 615 aaKnown RBP7.36□□□□□ -1.23
SMARCA5-202ENST00000508573 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
SMARCA5-202ENST00000508573 RHBDD1Q8TEB9 315 aa7.36□□□□□ -1.23
SMARCA5-202ENST00000508573 AIDAQ96BJ3 306 aa7.36□□□□□ -1.23
SMARCA5-202ENST00000508573 KRBA1A5PL33 1030 aa7.35□□□□□ -1.23
SMARCA5-202ENST00000508573 BNIP3LO60238 219 aa7.35□□□□□ -1.23
SMARCA5-202ENST00000508573 UBTFP17480 764 aaKnown RBP7.35□□□□□ -1.23
SMARCA5-202ENST00000508573 TLR1Q15399 786 aa7.35□□□□□ -1.23
SMARCA5-202ENST00000508573 GOLGA6L1Q8N7Z2 621 aa7.35□□□□□ -1.23
SMARCA5-202ENST00000508573 SIRT1Q96EB6 747 aa7.35□□□□□ -1.23
SMARCA5-202ENST00000508573 ATXN7L1Q9ULK2 861 aaPredicted RBP7.35□□□□□ -1.23
SMARCA5-202ENST00000508573 PROCP04070 461 aa7.34□□□□□ -1.23
SMARCA5-202ENST00000508573 FGFR3P22607 806 aa7.34□□□□□ -1.23
SMARCA5-202ENST00000508573 VAC14Q08AM6 782 aa7.34□□□□□ -1.23
SMARCA5-202ENST00000508573 GGA1Q9UJY5 639 aa7.34□□□□□ -1.23
SMARCA5-202ENST00000508573 TTBK1Q5TCY1 1321 aaPredicted RBP7.33□□□□□ -1.24
SMARCA5-202ENST00000508573 PLA2G4AP47712 749 aa7.33□□□□□ -1.24
SMARCA5-202ENST00000508573 IRF5Q13568 498 aa7.33□□□□□ -1.24
SMARCA5-202ENST00000508573 TBC1D9Q6ZT07 1266 aa7.33□□□□□ -1.24
SMARCA5-202ENST00000508573 BTBD6Q96KE9 485 aa7.33□□□□□ -1.24
SMARCA5-202ENST00000508573 ZCCHC2Q9C0B9 1178 aaKnown RBP7.33□□□□□ -1.24
SMARCA5-202ENST00000508573 COL8A1P27658 744 aa7.32□□□□□ -1.24
SMARCA5-202ENST00000508573 GRIN2CQ14957 1233 aa7.32□□□□□ -1.24
SMARCA5-202ENST00000508573 LINC00114Q6XXX2 140 aa7.32□□□□□ -1.24
SMARCA5-202ENST00000508573 CRISPLD1Q9H336 500 aa7.32□□□□□ -1.24
SMARCA5-202ENST00000508573 NDFIP2Q9NV92 336 aa7.32□□□□□ -1.24
SMARCA5-202ENST00000508573 INHAP05111 366 aa7.31□□□□□ -1.24
SMARCA5-202ENST00000508573 GDF10P55107 478 aa7.31□□□□□ -1.24
SMARCA5-202ENST00000508573 FIGNL1Q6PIW4 674 aa7.31□□□□□ -1.24
SMARCA5-202ENST00000508573 NIFKQ9BYG3 293 aaKnown RBP7.31□□□□□ -1.24
SMARCA5-202ENST00000508573 SUV39H2Q9H5I1 410 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms