RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 MAP3K5Q99683 1374 aa13.47□□□□□ -0.25
LIN54-207ENST00000508171 CASC1Q6TDU7 716 aa13.46□□□□□ -0.25
LIN54-207ENST00000508171 LRRC37A3O60309 1634 aa13.46□□□□□ -0.25
LIN54-207ENST00000508171 CACNA1FO60840 1977 aa13.46□□□□□ -0.25
LIN54-207ENST00000508171 GBP4Q96PP9 640 aa13.46□□□□□ -0.26
LIN54-207ENST00000508171 OSBPL3Q9H4L5 887 aa13.46□□□□□ -0.26
LIN54-207ENST00000508171 PHAXQ9H814 394 aaKnown RBP13.46□□□□□ -0.26
LIN54-207ENST00000508171 FAM208AQ9UK61 1670 aaKnown RBP13.45□□□□□ -0.26
LIN54-207ENST00000508171 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
LIN54-207ENST00000508171 LRRFIP2Q9Y608 721 aaKnown RBP13.45□□□□□ -0.26
LIN54-207ENST00000508171 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
LIN54-207ENST00000508171 ATP8B2P98198 1209 aa13.45□□□□□ -0.26
LIN54-207ENST00000508171 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
LIN54-207ENST00000508171 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
LIN54-207ENST00000508171 USP44Q9H0E7 712 aa13.45□□□□□ -0.26
LIN54-207ENST00000508171 LTN1O94822 1766 aa13.44□□□□□ -0.26
LIN54-207ENST00000508171 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
LIN54-207ENST00000508171 GNAI3P08754 354 aa13.44□□□□□ -0.26
LIN54-207ENST00000508171 LRRCC1Q9C099 1032 aa13.44□□□□□ -0.26
LIN54-207ENST00000508171 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
LIN54-207ENST00000508171 EIF5BO60841 1220 aaKnown RBP13.44□□□□□ -0.26
LIN54-207ENST00000508171 SALL3Q9BXA9 1300 aa13.43□□□□□ -0.26
LIN54-207ENST00000508171 ERC2O15083 957 aa13.43□□□□□ -0.26
LIN54-207ENST00000508171 REC8O95072 547 aa13.43□□□□□ -0.26
LIN54-207ENST00000508171 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
LIN54-207ENST00000508171 EIF2S2P20042 333 aaKnown RBP13.43□□□□□ -0.26
LIN54-207ENST00000508171 PKP1Q13835 747 aa13.43□□□□□ -0.26
LIN54-207ENST00000508171 MX1P20591 662 aa13.42□□□□□ -0.26
LIN54-207ENST00000508171 FAM43AQ8N2R8 423 aa13.42□□□□□ -0.26
LIN54-207ENST00000508171 IP6K1Q92551 441 aa13.42□□□□□ -0.26
LIN54-207ENST00000508171 KCNQ3O43525 872 aa13.41□□□□□ -0.26
LIN54-207ENST00000508171 ESCO1Q5FWF5 840 aa13.41□□□□□ -0.26
LIN54-207ENST00000508171 GAS2L3Q86XJ1 694 aa13.41□□□□□ -0.26
LIN54-207ENST00000508171 RGPD2P0DJD1 1756 aa13.41□□□□□ -0.26
LIN54-207ENST00000508171 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
LIN54-207ENST00000508171 PSME1Q06323 249 aa13.41□□□□□ -0.26
LIN54-207ENST00000508171 ZGPATQ8N5A5 531 aaKnown RBP13.41□□□□□ -0.26
LIN54-207ENST00000508171 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
LIN54-207ENST00000508171 BAG4O95429 457 aaKnown RBP13.4□□□□□ -0.26
LIN54-207ENST00000508171 RILPL2Q969X0 211 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 ANO8Q9HCE9 1232 aaPredicted RBP13.4□□□□□ -0.26
LIN54-207ENST00000508171 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 CHD2O14647 1828 aaKnown RBP13.4□□□□□ -0.26
LIN54-207ENST00000508171 TUBGCP6Q96RT7 1819 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 ST18O60284 1047 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 UBTFL1P0CB47 393 aaPredicted RBP13.4□□□□□ -0.26
LIN54-207ENST00000508171 MRE11P49959 708 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 UNC5CLQ8IV45 518 aa13.4□□□□□ -0.26
LIN54-207ENST00000508171 ANXA1P04083 346 aa13.39□□□□□ -0.27
LIN54-207ENST00000508171 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
LIN54-207ENST00000508171 CLEC17AQ6ZS10 378 aa13.39□□□□□ -0.27
LIN54-207ENST00000508171 CEMIPQ8WUJ3 1361 aa13.39□□□□□ -0.27
LIN54-207ENST00000508171 XPCQ01831 940 aaPredicted RBP13.39□□□□□ -0.27
LIN54-207ENST00000508171 SKOR2Q2VWA4 1001 aaPredicted RBP13.39□□□□□ -0.27
LIN54-207ENST00000508171 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
LIN54-207ENST00000508171 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
LIN54-207ENST00000508171 RRAGDQ9NQL2 400 aaPredicted RBP13.39□□□□□ -0.27
LIN54-207ENST00000508171 NBPF7P0C2Y1 421 aaPredicted RBP13.38□□□□□ -0.27
LIN54-207ENST00000508171 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
LIN54-207ENST00000508171 SOS1Q07889 1333 aaPredicted RBP13.38□□□□□ -0.27
LIN54-207ENST00000508171 CHMLP26374 656 aa13.38□□□□□ -0.27
LIN54-207ENST00000508171 NEK4P51957 841 aa13.38□□□□□ -0.27
LIN54-207ENST00000508171 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
LIN54-207ENST00000508171 PPP1R42Q7Z4L9 355 aa13.38□□□□□ -0.27
LIN54-207ENST00000508171 CYP2E1P05181 493 aaPredicted RBP13.37□□□□□ -0.27
LIN54-207ENST00000508171 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
LIN54-207ENST00000508171 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
LIN54-207ENST00000508171 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
LIN54-207ENST00000508171 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
LIN54-207ENST00000508171 NFAT5O94916 1531 aa13.37□□□□□ -0.27
LIN54-207ENST00000508171 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
LIN54-207ENST00000508171 SRCIN1Q9C0H9 1055 aa13.37□□□□□ -0.27
LIN54-207ENST00000508171 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
LIN54-207ENST00000508171 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 SURF6O75683 361 aaKnown RBP13.36□□□□□ -0.27
LIN54-207ENST00000508171 NUCB2P80303 420 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
LIN54-207ENST00000508171 N4BP2Q86UW6 1770 aaPredicted RBP13.36□□□□□ -0.27
LIN54-207ENST00000508171 GOLGA6L22H0YM25 854 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
LIN54-207ENST00000508171 IL25Q9H293 177 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 ZDHHC9Q9Y397 364 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 DDX49Q9Y6V7 483 aaKnown RBP13.36□□□□□ -0.27
LIN54-207ENST00000508171 BTBD11A6QL63 1104 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 ZNF530Q6P9A1 599 aaPredicted RBP13.36□□□□□ -0.27
LIN54-207ENST00000508171 CHAMP1Q96JM3 812 aa13.36□□□□□ -0.27
LIN54-207ENST00000508171 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
LIN54-207ENST00000508171 SRGAP3O43295 1099 aa13.35□□□□□ -0.27
LIN54-207ENST00000508171 PTMSP20962 102 aa13.35□□□□□ -0.27
LIN54-207ENST00000508171 TEFQ10587 303 aa13.35□□□□□ -0.27
LIN54-207ENST00000508171 CWC22Q9HCG8 908 aaKnown RBP13.35□□□□□ -0.27
LIN54-207ENST00000508171 BEND3Q5T5X7 828 aa13.35□□□□□ -0.27
LIN54-207ENST00000508171 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms